237 lines
12 KiB
Python
237 lines
12 KiB
Python
# -*- coding: UTF-8 -*-
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"""
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@Project:microproduct
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@File:ROIAlg.py
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@Function:
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@Contact:
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@Author:SHJ
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@Date:2021/11/17
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@Version:1.0.0
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"""
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import logging
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from tool.algorithm.image.ImageHandle import ImageHandler
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from tool.algorithm.algtools.PreProcess import PreProcess as pp
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import numpy as np
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logger = logging.getLogger("mylog")
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class ROIAlg:
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def __init__(self,):
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pass
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@staticmethod
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def roi_process(names, processing_path, processing_paras, preprocessed_paras):
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roi_paths = []
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roi = ROIAlg()
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for name in names:
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if 'LocalIncidenceAngle' in name:
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# 利用角度为nan生成Mask
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pp.check_LocalIncidenceAngle(preprocessed_paras[name],preprocessed_paras[name])
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angle_nan_mask_path = processing_path + 'angle_nan_mask.tif'
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roi.trans_tif2mask(angle_nan_mask_path, preprocessed_paras[name], np.nan)
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roi_paths.append(angle_nan_mask_path)
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elif ("HH" in name) or ("HV" in name) or ("VH" in name) or ("VV" in name):
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# 利用影像的有效范围生成MASK
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tif_mask_path = processing_path + name + "_tif_mask.tif"
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roi.trans_tif2mask(tif_mask_path, preprocessed_paras[name], np.nan)
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roi_paths.append(tif_mask_path)
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elif name == 'Covering':
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# 利用cover计算植被覆盖范围
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if processing_paras['CoveringIDs'] == 'empty':
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cover_data = ImageHandler.get_data(preprocessed_paras[name])
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cover_data[np.where(np.isnan(cover_data))] = 0
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cover_id_list = list(np.unique(cover_data))
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else:
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cover_id_list = list(processing_paras['CoveringIDs'].split(';'))
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cover_id_list = [int(num) for num in cover_id_list]
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cover_mask_path = processing_path + "cover_mask.tif"
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roi.trans_cover2mask(cover_mask_path, preprocessed_paras[name], cover_id_list)
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roi_paths.append(cover_mask_path)
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elif name == "NDVI":
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# 利用NDVI计算裸土范围该指数的输出值在 -1.0 和 1.0 之间，大部分表示植被量，
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# 负值主要根据云、水和雪而生成
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# 接近零的值则主要根据岩石和裸土而生成。
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# 较低的（小于等于 0.1）NDVI 值表示岩石、沙石或雪覆盖的贫瘠区域。
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# 中等值（0.2 至 0.3）表示灌木丛和草地
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# 较高的值（0.6 至 0.8）表示温带雨林和热带雨林。
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ndvi_mask_path = processing_path + "ndvi_mask.tif"
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ndvi_scope = list(processing_paras['NDVIScope'].split(';'))
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threshold_of_ndvi_min = float(ndvi_scope[0])
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threshold_of_ndvi_max = float(ndvi_scope[1])
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roi.trans_tif2mask(ndvi_mask_path, preprocessed_paras[name], threshold_of_ndvi_min, threshold_of_ndvi_max)
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roi_paths.append(ndvi_mask_path)
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# else:
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# # 其他特征影像
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# tif_mask_path = processing_path + name + "_mask.tif"
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# roi.trans_tif2mask(tif_mask_path, preprocessed_paras[name], np.nan)
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# roi_paths.append(tif_mask_path)
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bare_land_mask_path = processing_path + "bare_land_mask.tif"
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for roi_path in roi_paths:
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roi.combine_mask(bare_land_mask_path, roi_path, bare_land_mask_path)
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return bare_land_mask_path
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@staticmethod
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def roi_process_VP(names, processing_path, processing_paras, preprocessed_paras, file_name):
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roi_paths = []
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roi = ROIAlg()
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for name in names:
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if 'LocalIncidenceAngle' in name:
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# 利用角度为nan生成Mask
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pp.check_LocalIncidenceAngle(preprocessed_paras[name], preprocessed_paras[name])
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angle_nan_mask_path = processing_path + 'angle_nan_mask.tif'
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roi.trans_tif2mask(angle_nan_mask_path, preprocessed_paras[name], np.nan)
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roi_paths.append(angle_nan_mask_path)
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elif ("HH" in name) or ("HV" in name) or ("VH" in name) or ("VV" in name):
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# 利用影像的有效范围生成MASK
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tif_mask_path = processing_path + name + "_tif_mask.tif"
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roi.trans_tif2mask(tif_mask_path, preprocessed_paras[name], np.nan)
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roi_paths.append(tif_mask_path)
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elif name == 'Covering':
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# 利用cover计算植被覆盖范围
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cover_mask_path = processing_path + "cover_mask.tif"
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if processing_paras['CoveringIDs'] == 'empty':
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cover_data = ImageHandler.get_data(preprocessed_paras[file_name + '_' + name])
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cover_data[np.where(np.isnan(cover_data))] = 0
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cover_id_list = list(np.unique(cover_data))
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else:
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cover_id_list = list(processing_paras['CoveringIDs'].split(';'))
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cover_id_list = [int(num) for num in cover_id_list]
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roi.trans_cover2mask(cover_mask_path, preprocessed_paras[file_name + '_' + name], cover_id_list)
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roi_paths.append(cover_mask_path)
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elif name == "NDVI":
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# 利用NDVI计算裸土范围该指数的输出值在 -1.0 和 1.0 之间，大部分表示植被量，
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# 负值主要根据云、水和雪而生成
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# 接近零的值则主要根据岩石和裸土而生成。
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# 较低的（小于等于 0.1）NDVI 值表示岩石、沙石或雪覆盖的贫瘠区域。
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# 中等值（0.2 至 0.3）表示灌木丛和草地
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# 较高的值（0.6 至 0.8）表示温带雨林和热带雨林。
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ndvi_mask_path = processing_path + "ndvi_mask.tif"
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ndvi_scope = list(processing_paras['NDVIScope'].split(';'))
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threshold_of_ndvi_min = float(ndvi_scope[0])
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threshold_of_ndvi_max = float(ndvi_scope[1])
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roi.trans_tif2mask(ndvi_mask_path, preprocessed_paras[name], threshold_of_ndvi_min,
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threshold_of_ndvi_max)
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roi_paths.append(ndvi_mask_path)
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# else:
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# # 其他特征影像
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# tif_mask_path = processing_path + name + "_mask.tif"
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# roi.trans_tif2mask(tif_mask_path, preprocessed_paras[name], np.nan)
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# roi_paths.append(tif_mask_path)
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bare_land_mask_path = processing_path + "bare_land_mask.tif"
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for roi_path in roi_paths:
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roi.combine_mask(bare_land_mask_path, roi_path, bare_land_mask_path)
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return bare_land_mask_path
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@staticmethod
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def trans_tif2mask(out_mask_path, in_tif_path, threshold_min, threshold_max = None):
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"""
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:param out_mask_path:mask输出路径
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:param in_tif_path:输入路径
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:param threshold_min:最小阈值
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:param threshold_max:最大阈值
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:return: True or False
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"""
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image_handler = ImageHandler()
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proj = image_handler.get_projection(in_tif_path)
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geotrans = image_handler.get_geotransform(in_tif_path)
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array = image_handler.get_band_array(in_tif_path, 1)
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if threshold_max == None and np.isnan(threshold_min)==True:
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nan = np.isnan(array)
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mask = (nan.astype(int) == 0).astype(int)
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mask1 = ((array == -9999).astype(int) == 0).astype(int)
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mask *= mask1
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image_handler.write_img(out_mask_path, proj, geotrans, mask)
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else:
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if threshold_min < threshold_max:
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mask = ((array > threshold_min) & (array < threshold_max)).astype(int)
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image_handler.write_img(out_mask_path, proj, geotrans, mask)
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elif threshold_min > threshold_max:
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mask = ((array < threshold_min) & (array > threshold_max)).astype(int)
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image_handler.write_img(out_mask_path, proj, geotrans, mask)
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elif threshold_max == threshold_min:
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mask = ((array == threshold_min).astype(int) == 0).astype(int)
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image_handler.write_img(out_mask_path, proj, geotrans, mask)
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logger.info("trans_tif2mask success, path: %s", out_mask_path)
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return True
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@staticmethod
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def trans_cover2mask(out_mask_path, in_tif_path, cover_id_list):
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"""
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:param out_mask_path:mask输出路径
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:param in_tif_path:输入路径
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:param cover_id_list 地表覆盖类型数据的id
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:return: True or False
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"""
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image_handler = ImageHandler()
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proj = image_handler.get_projection(in_tif_path)
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geotrans = image_handler.get_geotransform(in_tif_path)
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array = image_handler.get_band_array(in_tif_path, 1)
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mask = np.zeros(array.shape, dtype=bool)
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for id in cover_id_list:
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mask_tmp = (array == id)
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mask = mask | mask_tmp
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mask = mask.astype(int)
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image_handler.write_img(out_mask_path, proj, geotrans, mask)
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@staticmethod
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def combine_mask(out_mask_path, in_main_mask_path, in_sub_mask_path):
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"""
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:param out_mask_path:输出路径
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:param in_main_mask_path:主mask路径，输出影像采用主mask的地理信息
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:param in_sub_mask_path:副mask路径
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"""
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image_handler = ImageHandler()
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proj = image_handler.get_projection(in_main_mask_path)
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geotrans = image_handler.get_geotransform(in_main_mask_path)
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main_array = image_handler.get_band_array(in_main_mask_path, 1)
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if image_handler.get_dataset(in_sub_mask_path) != None:
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sub_array = image_handler.get_band_array(in_sub_mask_path, 1)
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main_array = main_array * sub_array
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image_handler.write_img(out_mask_path, proj, geotrans, main_array)
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logger.info("combine_mask success, path: %s", out_mask_path)
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return True
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@staticmethod
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def cal_roi(out_tif_path, in_tif_path, mask_path, background_value=1):
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"""
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:param out_tif_path:ROI的影像
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:param in_tif_path:计算ROI的影像
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:param mask_path:掩模
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:param background_value:无效区域设置的背景值
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:return: True or False
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"""
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image_handler = ImageHandler()
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proj = image_handler.get_projection(in_tif_path)
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geotrans = image_handler.get_geotransform(in_tif_path)
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tif_array = image_handler.get_data(in_tif_path) # 读取所有波段的像元值存为数组
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mask_array = image_handler.get_band_array(mask_path, 1)
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if len(tif_array.shape) == 3:
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im_bands, im_height, im_width = tif_array.shape
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else:
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im_bands, (im_height, im_width) = 1, tif_array.shape
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if im_bands == 1:
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tif_array[np.isnan(mask_array)] = background_value
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tif_array[mask_array == 0] = background_value
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elif im_bands>1:
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for i in range(0, im_bands):
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tif_array[i, :, :][np.isnan(mask_array)] = background_value
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tif_array[i, :, :][mask_array == 0] = background_value
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image_handler.write_img(out_tif_path, proj, geotrans, tif_array, background_value)
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logger.info("cal_roi success, path: %s", out_tif_path)
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return True
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# if __name__ == '__main__':
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# dir = r'G:\MicroWorkspace\C-SAR\SoilMoisture\Temporary\processing/'
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# out_tif_path = dir + 'soil_moisture_roi.tif'
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# in_tif_path = dir + 'soil_moisture.tif'
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# mask_path = dir + 'bare_land_mask.tif'
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# background_value = np.nan
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# ROIAlg.cal_roi(out_tif_path, in_tif_path, mask_path, background_value)
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# pass |