更新了 vcpkg.json
parent
7c88569bea
commit
91ae6fce63
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@ -0,0 +1,24 @@
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@echo off
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setlocal
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set dir=%~dps0
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if not exist %dir%cgnsconvert.exe goto notfound
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rem -- for path setting to dlls
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if exist %dir%..\cgconfig.bat call %dir%..\cgconfig.bat
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if exist %dir%cgconfig.bat call %dir%cgconfig.bat
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set links=
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if "%1" == "-links" (
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set links=-l
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shift
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)
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%dir%cgnsconvert -h %links% %1 %2
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goto done
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:notfound
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echo cgnsconvert.exe not found in %dir%
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:done
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endlocal
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@ -0,0 +1,18 @@
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@echo off
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setlocal
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set dir=%~dps0
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if not exist %dir%cgnscheck.exe goto notfound
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rem -- for path setting to dlls
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if exist %dir%..\cgconfig.bat call %dir%..\cgconfig.bat
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if exist %dir%cgconfig.bat call %dir%cgconfig.bat
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%dir%cgnscheck -U %1 %2
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goto done
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:notfound
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echo cgnscheck.exe not found in %dir%
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:done
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endlocal
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@ -0,0 +1,24 @@
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@echo off
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setlocal
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set dir=%~dps0
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if not exist %dir%cgnsconvert.exe goto notfound
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rem -- for path setting to dlls
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if exist %dir%..\cgconfig.bat call %dir%..\cgconfig.bat
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if exist %dir%cgconfig.bat call %dir%cgconfig.bat
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set links=
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if "%1" == "-links" (
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set links=-l
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shift
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)
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%dir%cgnsconvert -a %links% %1 %2
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goto done
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:notfound
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echo cgnsconvert.exe not found in %dir%
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:done
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endlocal
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@ -0,0 +1,77 @@
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# makefile include for building CGNS code
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# this file contains the options and libraries used for
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# building and linking CGNS code, and is intended to be
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# included in a user's Makefile from the installation
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#-----------------------------------------------------------------------
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# CGNS library build options. A 1 indicates that the library
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# was built with that option, a 0 indicates without
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# CGNS_DEBUG = debug
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# CGNS_LEGACY = legacy code (prior to 3.0)
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# CGNS_SCOPING = scoping of enums
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# CGNS_64BIT = 64 bit support
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# CGNS_FORTRAN = Fortran interface
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# CGNS_PARALLEL = parallel I/O
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# CGNS_BASESCOPE = Base scope for family and zone reference-to
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#-----------------------------------------------------------------------
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CGNS_DEBUG = 0
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CGNS_LEGACY = 0
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CGNS_SCOPING = 0
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CGNS_64BIT = 1
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CGNS_FORTRAN = 0
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CGNS_PARALLEL = 0
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CGNS_BASESCOPE = 0
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#-----------------------------------------------------------------------
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# CGNS_LIBDIR - installation directory for CGNS library
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# CGNS_INCLUDEDIR - installation directory for CGNS headers
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#-----------------------------------------------------------------------
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CGNS_LIBDIR = F:\temp\CGNS-4.3.0-INSTALL\lib
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CGNS_INCLUDEDIR = F:\temp\CGNS-4.3.0-INSTALL\include
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#-----------------------------------------------------------------------
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# CGNS_CC - C compiler used to build library
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# CGNS_CFLAGS - compiler flags used to build library
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# CGNS_LDFLAGS - any additional linking flags
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#-----------------------------------------------------------------------
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CGNS_CC = D:\software\Microsoft Visual Studio\2017\Community\VC\Tools\MSVC\14.16.27023\bin\Hostx86\x64\cl.exe
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CGNS_CFLAGS = /DWIN32 /D_WINDOWS /W3 /MD /O2 /Ob2 /DNDEBUG
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CGNS_LDFLAGS = /machine:x64 /INCREMENTAL:NO
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#-----------------------------------------------------------------------
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# LIBCGNS - CGNS library name
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#-----------------------------------------------------------------------
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CGNS_LIB = $(CGNS_LIBDIR)/cgns.lib
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#-----------------------------------------------------------------------
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# CGNS_HDF5INC - path to HDF5 header files
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# CGNS_HDF5LIB - HDF5 library
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# CGNS_SZIPLIB - szip library (if needed)
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# CGNS_ZLIBLIB - zlib library (if needed)
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#-----------------------------------------------------------------------
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CGNS_HDF5INC =
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CGNS_HDF5LIB = hdf5-shared
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CGNS_SZIPLIB =
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CGNS_ZLIBLIB =
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#-----------------------------------------------------------------------
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# CGNS_MPIINC - path to MPI header files
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# CGNS_MPILIBS - MPI libraries
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#-----------------------------------------------------------------------
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CGNS_MPIINC =
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CGNS_MPILIBS =
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#-----------------------------------------------------------------------
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# CGNS_LINKLIBS contains the list of libraries
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# with which a CGNS application needs to link
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#-----------------------------------------------------------------------
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CGNS_LINKLIBS = $(CGNS_LIB) $(CGNS_HDF5LIB) $(CGNS_SZIPLIB) \
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$(CGNS_ZLIBLIB) $(CGNS_MPILIBS)
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@ -0,0 +1,473 @@
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/* ------------------------------------------------------------------------- *
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* CGNS - CFD General Notation System (http://www.cgns.org) *
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* CGNS/MLL - Mid-Level Library header file *
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* Please see cgnsconfig.h file for this local installation configuration *
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* ------------------------------------------------------------------------- */
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/* ------------------------------------------------------------------------- *
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This software is provided 'as-is', without any express or implied warranty.
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In no event will the authors be held liable for any damages arising from
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the use of this software.
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Permission is granted to anyone to use this software for any purpose,
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including commercial applications, and to alter it and redistribute it
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freely, subject to the following restrictions:
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1. The origin of this software must not be misrepresented; you must not
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claim that you wrote the original software. If you use this software
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in a product, an acknowledgment in the product documentation would be
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appreciated but is not required.
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2. Altered source versions must be plainly marked as such, and must not
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be misrepresented as being the original software.
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3. This notice may not be removed or altered from any source distribution.
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* ------------------------------------------------------------------------- */
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#ifndef CGNS_IO_H
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#define CGNS_IO_H
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#include "cgnstypes.h"
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#if defined(_WIN32) && defined(BUILD_DLL)
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# define CGEXTERN extern __declspec(dllexport)
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#else
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# define CGEXTERN extern
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#endif
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/* these should be the same as in cgnslib.h
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but are included here for completeness */
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#define CGIO_MODE_READ 0
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#define CGIO_MODE_WRITE 1
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#define CGIO_MODE_MODIFY 2
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#define CGIO_FILE_NONE 0
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#define CGIO_FILE_ADF 1
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#define CGIO_FILE_HDF5 2
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#define CGIO_FILE_ADF2 3
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#define CGIO_CONTIGUOUS 0
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#define CGIO_COMPACT 1
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#define CGIO_CHUNKED 2
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/* currently these are the same as for ADF */
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#define CGIO_MAX_DATATYPE_LENGTH 2
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#define CGIO_MAX_DIMENSIONS 12
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#define CGIO_MAX_NAME_LENGTH 32
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#define CGIO_MAX_LABEL_LENGTH 32
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#define CGIO_MAX_VERSION_LENGTH 32
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#define CGIO_MAX_DATE_LENGTH 32
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#define CGIO_MAX_ERROR_LENGTH 80
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#define CGIO_MAX_LINK_DEPTH 100
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#define CGIO_MAX_FILE_LENGTH 1024
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#define CGIO_MAX_LINK_LENGTH 4096
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/* these are the cgio error codes */
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#define CGIO_ERR_NONE 0
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#define CGIO_ERR_BAD_CGIO -1
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#define CGIO_ERR_MALLOC -2
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#define CGIO_ERR_FILE_MODE -3
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#define CGIO_ERR_FILE_TYPE -4
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#define CGIO_ERR_NULL_FILE -5
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#define CGIO_ERR_TOO_SMALL -6
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#define CGIO_ERR_NOT_FOUND -7
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#define CGIO_ERR_NULL_PATH -8
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#define CGIO_ERR_NO_MATCH -9
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#define CGIO_ERR_FILE_OPEN -10
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#define CGIO_ERR_READ_ONLY -11
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#define CGIO_ERR_NULL_STRING -12
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#define CGIO_ERR_BAD_OPTION -13
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#define CGIO_ERR_FILE_RENAME -14
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#define CGIO_ERR_TOO_MANY -15
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#define CGIO_ERR_DIMENSIONS -16
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#define CGIO_ERR_BAD_TYPE -17
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#define CGIO_ERR_NOT_HDF5 -18
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#ifdef __cplusplus
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extern "C" {
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#endif
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/*---------------------------------------------------------*/
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CGEXTERN int cgio_path_add (
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const char *path
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);
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CGEXTERN int cgio_path_delete (
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const char *path
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);
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CGEXTERN int cgio_find_file (
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const char *parentfile,
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const char *filename,
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int file_type,
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int max_path_len,
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char *pathname
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);
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/*---------------------------------------------------------*/
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CGEXTERN int cgio_is_supported (
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int file_type
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);
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CGEXTERN int cgio_configure (
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int what,
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void *value
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);
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CGEXTERN void cgio_cleanup (void);
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CGEXTERN int cgio_check_file (
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const char *filename,
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int *file_type
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);
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CGEXTERN int cgio_compute_data_size (
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const char *data_type,
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int num_dims,
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const cgsize_t *dim_vals,
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cglong_t *count
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);
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CGEXTERN int cgio_check_dimensions (
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int ndims,
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const cglong_t *dims
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);
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CGEXTERN int cgio_copy_dimensions (
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int ndims,
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const cglong_t *dims64,
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cgsize_t *dims
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);
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/*---------------------------------------------------------*/
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CGEXTERN int cgio_open_file (
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const char *filename,
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int file_mode,
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int file_type,
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int *cgio_num
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);
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CGEXTERN int cgio_close_file (
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int cgio_num
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);
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CGEXTERN int cgio_compress_file (
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int cgio_num,
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const char *filename
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);
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CGEXTERN int cgio_copy_file (
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int cgio_num_inp,
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int cgio_num_out,
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int follow_links
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);
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CGEXTERN int cgio_flush_to_disk (
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int cgio_num
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);
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/*---------------------------------------------------------*/
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CGEXTERN int cgio_library_version (
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int cgio_num,
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char *version
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);
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CGEXTERN int cgio_file_version (
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int cgio_num,
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char *file_version,
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char *creation_date,
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|
char *modified_date
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);
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|
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CGEXTERN int cgio_get_root_id (
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int cgio_num,
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double *rootid
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);
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|
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CGEXTERN int cgio_get_file_type (
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int cgio_num,
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int *file_type
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);
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|
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|
/*---------------------------------------------------------*/
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|
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CGEXTERN void cgio_error_code (
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int *errcode,
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int *file_type
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);
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|
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CGEXTERN int cgio_error_message (
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char *error_msg
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);
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|
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CGEXTERN void cgio_error_exit (
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const char *msg
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);
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|
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CGEXTERN void cgio_error_abort (
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int abort_flag
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|
);
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|
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/*---------------------------------------------------------*/
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|
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CGEXTERN int cgio_create_node (
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int cgio_num,
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double pid,
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const char *name,
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double *id
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|
);
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|
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CGEXTERN int cgio_new_node (
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int cgio_num,
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double pid,
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const char *name,
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const char *label,
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const char *data_type,
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|
int ndims,
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const cgsize_t *dims,
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const void *data,
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double *id
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);
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|
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CGEXTERN int cgio_delete_node (
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int cgio_num,
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double pid,
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double id
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);
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|
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CGEXTERN int cgio_move_node (
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int cgio_num,
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double pid,
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double id,
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double new_pid
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);
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|
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CGEXTERN int cgio_copy_node (
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int cgio_num_inp,
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double id_inp,
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int cgio_num_out,
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double id_out
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);
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|
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CGEXTERN int cgio_release_id (
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int cgio_num,
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double id
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);
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|
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/*---------------------------------------------------------*/
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CGEXTERN int cgio_is_link (
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int cgio_num,
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double id,
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int *link_len
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);
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|
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CGEXTERN int cgio_link_size (
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int cgio_num,
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double id,
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int *file_len,
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|
int *name_len
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||||||
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);
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|
|
||||||
|
CGEXTERN int cgio_create_link (
|
||||||
|
int cgio_num,
|
||||||
|
double pid,
|
||||||
|
const char *name,
|
||||||
|
const char *filename,
|
||||||
|
const char *name_in_file,
|
||||||
|
double *id
|
||||||
|
);
|
||||||
|
|
||||||
|
CGEXTERN int cgio_get_link (
|
||||||
|
int cgio_num,
|
||||||
|
double id,
|
||||||
|
char *filename,
|
||||||
|
char *name_in_file
|
||||||
|
);
|
||||||
|
|
||||||
|
/*---------------------------------------------------------*/
|
||||||
|
|
||||||
|
CGEXTERN int cgio_number_children (
|
||||||
|
int cgio_num,
|
||||||
|
double id,
|
||||||
|
int *num_children
|
||||||
|
);
|
||||||
|
|
||||||
|
CGEXTERN int cgio_children_ids (
|
||||||
|
int cgio_num,
|
||||||
|
double pid,
|
||||||
|
int start,
|
||||||
|
int max_ret,
|
||||||
|
int *num_ret,
|
||||||
|
double *ids
|
||||||
|
);
|
||||||
|
|
||||||
|
CGEXTERN int cgio_children_names (
|
||||||
|
int cgio_num,
|
||||||
|
double pid,
|
||||||
|
int start,
|
||||||
|
int max_ret,
|
||||||
|
int name_len,
|
||||||
|
int *num_ret,
|
||||||
|
char *names
|
||||||
|
);
|
||||||
|
|
||||||
|
/*---------------------------------------------------------*/
|
||||||
|
|
||||||
|
CGEXTERN int cgio_get_node_id (
|
||||||
|
int cgio_num,
|
||||||
|
double pid,
|
||||||
|
const char *name,
|
||||||
|
double *id
|
||||||
|
);
|
||||||
|
|
||||||
|
CGEXTERN int cgio_get_name (
|
||||||
|
int cgio_num,
|
||||||
|
double id,
|
||||||
|
char *name
|
||||||
|
);
|
||||||
|
|
||||||
|
CGEXTERN int cgio_get_label (
|
||||||
|
int cgio_num,
|
||||||
|
double id,
|
||||||
|
char *label
|
||||||
|
);
|
||||||
|
|
||||||
|
CGEXTERN int cgio_get_data_type (
|
||||||
|
int cgio_num,
|
||||||
|
double id,
|
||||||
|
char *data_type
|
||||||
|
);
|
||||||
|
|
||||||
|
CGEXTERN int cgio_get_data_size (
|
||||||
|
int cgio_num,
|
||||||
|
double id,
|
||||||
|
cglong_t *data_size
|
||||||
|
);
|
||||||
|
|
||||||
|
CGEXTERN int cgio_get_dimensions (
|
||||||
|
int cgio_num,
|
||||||
|
double id,
|
||||||
|
int *num_dims,
|
||||||
|
cgsize_t *dims
|
||||||
|
);
|
||||||
|
|
||||||
|
CGEXTERN int cgio_read_all_data_type (
|
||||||
|
int cgio_num,
|
||||||
|
double id,
|
||||||
|
const char *m_data_type,
|
||||||
|
void *data
|
||||||
|
);
|
||||||
|
|
||||||
|
CGEXTERN int cgio_read_block_data_type (
|
||||||
|
int cgio_num,
|
||||||
|
double id,
|
||||||
|
cgsize_t b_start,
|
||||||
|
cgsize_t b_end,
|
||||||
|
const char *m_data_type,
|
||||||
|
void *data
|
||||||
|
);
|
||||||
|
|
||||||
|
CGEXTERN int cgio_read_data_type (
|
||||||
|
int cgio_num,
|
||||||
|
double id,
|
||||||
|
const cgsize_t *s_start,
|
||||||
|
const cgsize_t *s_end,
|
||||||
|
const cgsize_t *s_stride,
|
||||||
|
const char *m_data_type,
|
||||||
|
int m_num_dims,
|
||||||
|
const cgsize_t *m_dims,
|
||||||
|
const cgsize_t *m_start,
|
||||||
|
const cgsize_t *m_end,
|
||||||
|
const cgsize_t *m_stride,
|
||||||
|
void *data
|
||||||
|
);
|
||||||
|
|
||||||
|
/*---------------------------------------------------------*/
|
||||||
|
|
||||||
|
CGEXTERN int cgio_set_name (
|
||||||
|
int cgio_num,
|
||||||
|
double pid,
|
||||||
|
double id,
|
||||||
|
const char *name
|
||||||
|
);
|
||||||
|
|
||||||
|
CGEXTERN int cgio_set_label (
|
||||||
|
int cgio_num,
|
||||||
|
double id,
|
||||||
|
const char *label
|
||||||
|
);
|
||||||
|
|
||||||
|
CGEXTERN int cgio_set_dimensions (
|
||||||
|
int cgio_num,
|
||||||
|
double id,
|
||||||
|
const char *data_type,
|
||||||
|
int num_dims,
|
||||||
|
const cgsize_t *dims
|
||||||
|
);
|
||||||
|
|
||||||
|
CGEXTERN int cgio_write_all_data (
|
||||||
|
int cgio_num,
|
||||||
|
double id,
|
||||||
|
const void *data
|
||||||
|
);
|
||||||
|
|
||||||
|
CGEXTERN int cgio_write_all_data_type (
|
||||||
|
int cgio_num,
|
||||||
|
double id,
|
||||||
|
const char *m_data_type,
|
||||||
|
const void *data
|
||||||
|
);
|
||||||
|
|
||||||
|
CGEXTERN int cgio_write_block_data (
|
||||||
|
int cgio_num,
|
||||||
|
double id,
|
||||||
|
cgsize_t b_start,
|
||||||
|
cgsize_t b_end,
|
||||||
|
void *data
|
||||||
|
);
|
||||||
|
|
||||||
|
CGEXTERN int cgio_write_data (
|
||||||
|
int cgio_num,
|
||||||
|
double id,
|
||||||
|
const cgsize_t *s_start,
|
||||||
|
const cgsize_t *s_end,
|
||||||
|
const cgsize_t *s_stride,
|
||||||
|
int m_num_dims,
|
||||||
|
const cgsize_t *m_dims,
|
||||||
|
const cgsize_t *m_start,
|
||||||
|
const cgsize_t *m_end,
|
||||||
|
const cgsize_t *m_stride,
|
||||||
|
const void *data
|
||||||
|
);
|
||||||
|
|
||||||
|
CGEXTERN int cgio_write_data_type (
|
||||||
|
int cgio_num,
|
||||||
|
double id,
|
||||||
|
const cgsize_t *s_start,
|
||||||
|
const cgsize_t *s_end,
|
||||||
|
const cgsize_t *s_stride,
|
||||||
|
const char *m_data_type,
|
||||||
|
int m_num_dims,
|
||||||
|
const cgsize_t *m_dims,
|
||||||
|
const cgsize_t *m_start,
|
||||||
|
const cgsize_t *m_end,
|
||||||
|
const cgsize_t *m_stride,
|
||||||
|
const void *data
|
||||||
|
);
|
||||||
|
|
||||||
|
#ifdef __cplusplus
|
||||||
|
}
|
||||||
|
#endif
|
||||||
|
#undef CGEXTERN
|
||||||
|
#endif
|
||||||
|
|
||||||
|
|
@ -0,0 +1,59 @@
|
||||||
|
/* ------------------------------------------------------------------------- *
|
||||||
|
* CGNS - CFD General Notation System (http://www.cgns.org) *
|
||||||
|
* CGNS/MLL - Mid-Level Library header file *
|
||||||
|
* ------------------------------------------------------------------------- */
|
||||||
|
|
||||||
|
/* ------------------------------------------------------------------------- *
|
||||||
|
|
||||||
|
This software is provided 'as-is', without any express or implied warranty.
|
||||||
|
In no event will the authors be held liable for any damages arising from
|
||||||
|
the use of this software.
|
||||||
|
|
||||||
|
Permission is granted to anyone to use this software for any purpose,
|
||||||
|
including commercial applications, and to alter it and redistribute it
|
||||||
|
freely, subject to the following restrictions:
|
||||||
|
|
||||||
|
1. The origin of this software must not be misrepresented; you must not
|
||||||
|
claim that you wrote the original software. If you use this software
|
||||||
|
in a product, an acknowledgment in the product documentation would be
|
||||||
|
appreciated but is not required.
|
||||||
|
|
||||||
|
2. Altered source versions must be plainly marked as such, and must not
|
||||||
|
be misrepresented as being the original software.
|
||||||
|
|
||||||
|
3. This notice may not be removed or altered from any source distribution.
|
||||||
|
|
||||||
|
* ------------------------------------------------------------------------- */
|
||||||
|
|
||||||
|
/* ------------------------------------------------------------------------- *
|
||||||
|
This file has been generated during the CGNS/MLL installation.
|
||||||
|
This is a snapshot of the parameters used for CGNS/MLL production and
|
||||||
|
some PATHS parameters (headers or shared libs) may change or
|
||||||
|
disappear (for example in case of cross-compilation).
|
||||||
|
* ------------------------------------------------------------------------- */
|
||||||
|
|
||||||
|
#ifndef CGNSCONFIG_H
|
||||||
|
#define CGNSCONFIG_H
|
||||||
|
|
||||||
|
#define CG_BUILD_DEBUG 0
|
||||||
|
#define CG_BUILD_FORTRAN 0
|
||||||
|
#define CG_BUILD_BASESCOPE 0
|
||||||
|
|
||||||
|
#define HDF5_INCLUDE_PATH ""
|
||||||
|
#define HDF5_LIBRARY "hdf5-shared"
|
||||||
|
|
||||||
|
#define HDF5_NEED_MPI 0
|
||||||
|
#define HDF5_NEED_SZIP 0
|
||||||
|
#define HDF5_NEED_ZLIB 0
|
||||||
|
|
||||||
|
#define MPI_INCLUDE_PATH ""
|
||||||
|
#define MPI_LIBRARY ""
|
||||||
|
#define SZIP_LIBRARY ""
|
||||||
|
#define ZLIB_LIBRARY ""
|
||||||
|
|
||||||
|
#define MPI_INC ""
|
||||||
|
#define MPI_LIBS ""
|
||||||
|
|
||||||
|
#include "cgnstypes.h"
|
||||||
|
|
||||||
|
#endif
|
||||||
File diff suppressed because it is too large
Load Diff
|
|
@ -0,0 +1,106 @@
|
||||||
|
/* ------------------------------------------------------------------------- *
|
||||||
|
* CGNS - CFD General Notation System (http://www.cgns.org) *
|
||||||
|
* CGNS/MLL - Mid-Level Library header file *
|
||||||
|
* Please see cgnsconfig.h file for this local installation configuration *
|
||||||
|
* ------------------------------------------------------------------------- */
|
||||||
|
|
||||||
|
/* ------------------------------------------------------------------------- *
|
||||||
|
|
||||||
|
This software is provided 'as-is', without any express or implied warranty.
|
||||||
|
In no event will the authors be held liable for any damages arising from
|
||||||
|
the use of this software.
|
||||||
|
|
||||||
|
Permission is granted to anyone to use this software for any purpose,
|
||||||
|
including commercial applications, and to alter it and redistribute it
|
||||||
|
freely, subject to the following restrictions:
|
||||||
|
|
||||||
|
1. The origin of this software must not be misrepresented; you must not
|
||||||
|
claim that you wrote the original software. If you use this software
|
||||||
|
in a product, an acknowledgment in the product documentation would be
|
||||||
|
appreciated but is not required.
|
||||||
|
|
||||||
|
2. Altered source versions must be plainly marked as such, and must not
|
||||||
|
be misrepresented as being the original software.
|
||||||
|
|
||||||
|
3. This notice may not be removed or altered from any source distribution.
|
||||||
|
|
||||||
|
* ------------------------------------------------------------------------- */
|
||||||
|
|
||||||
|
#ifndef CGNSTYPES_H
|
||||||
|
#define CGNSTYPES_H
|
||||||
|
|
||||||
|
#define CG_BUILD_HDF5 1
|
||||||
|
#define CG_BUILD_LEGACY 0
|
||||||
|
#define CG_BUILD_64BIT 1
|
||||||
|
#define CG_BUILD_SCOPE 0
|
||||||
|
#define CG_BUILD_BASESCOPE 0
|
||||||
|
#define CG_BUILD_PARALLEL 0
|
||||||
|
#define CG_BUILD_COMPLEX_C99_EXT 0
|
||||||
|
|
||||||
|
#define CG_MAX_INT32 0x7FFFFFFF
|
||||||
|
#ifdef _WIN32
|
||||||
|
# define CG_LONG_T __int64
|
||||||
|
#else
|
||||||
|
# define CG_LONG_T long long
|
||||||
|
#endif
|
||||||
|
|
||||||
|
#if CG_BUILD_HDF5
|
||||||
|
|
||||||
|
/* ----------------------------------------------------------------
|
||||||
|
* convert between HDF5 and ADF ids
|
||||||
|
* ---------------------------------------------------------------- */
|
||||||
|
|
||||||
|
#define to_ADF_ID(ID,ADF_ID) memcpy(&(ADF_ID),&(ID),sizeof(hid_t))
|
||||||
|
#define to_HDF_ID(ADF_ID,ID) memcpy(&(ID),&(ADF_ID),sizeof(hid_t))
|
||||||
|
|
||||||
|
/* Determine if hdf5 has multi-dataset read/write capabilities */
|
||||||
|
|
||||||
|
#define HDF5_HAVE_MULTI_DATASETS 0
|
||||||
|
|
||||||
|
/* Determine if hdf5 has collective metadata APIs */
|
||||||
|
|
||||||
|
#define HDF5_HAVE_COLL_METADATA 0
|
||||||
|
|
||||||
|
/* Determine if hdf5 H5Pset_file_space_strategy */
|
||||||
|
|
||||||
|
#define HDF5_HAVE_FILE_SPACE_STRATEGY 1
|
||||||
|
|
||||||
|
#endif
|
||||||
|
|
||||||
|
#define CG_HAVE_STAT64_STRUCT 1
|
||||||
|
|
||||||
|
#if CG_BUILD_LEGACY
|
||||||
|
# define CG_SIZEOF_SIZE 32
|
||||||
|
# define CG_SIZE_DATATYPE "I4"
|
||||||
|
# define cgerr_t int
|
||||||
|
# define cgint_t int
|
||||||
|
# define cgsize_t int
|
||||||
|
# define cgid_t double
|
||||||
|
#else
|
||||||
|
# if CG_BUILD_64BIT
|
||||||
|
# define CG_SIZEOF_SIZE 64
|
||||||
|
# define CG_SIZE_DATATYPE "I8"
|
||||||
|
typedef CG_LONG_T cgsize_t;
|
||||||
|
# else
|
||||||
|
# define CG_SIZEOF_SIZE 32
|
||||||
|
# define CG_SIZE_DATATYPE "I4"
|
||||||
|
typedef int cgsize_t;
|
||||||
|
# endif
|
||||||
|
typedef int cgerr_t;
|
||||||
|
typedef int cgint_t;
|
||||||
|
typedef double cgid_t;
|
||||||
|
#endif
|
||||||
|
|
||||||
|
/* Define an int type that is interoperabable with Fortran's INTEGER */
|
||||||
|
#define FORTRAN_DEFAULT_INTEGER_C_INT64_T 0
|
||||||
|
#if FORTRAN_DEFAULT_INTEGER_C_INT64_T == 1
|
||||||
|
typedef CG_LONG_T cgint_f;
|
||||||
|
#else
|
||||||
|
typedef int cgint_f;
|
||||||
|
#endif
|
||||||
|
|
||||||
|
|
||||||
|
typedef CG_LONG_T cglong_t;
|
||||||
|
typedef unsigned CG_LONG_T cgulong_t;
|
||||||
|
|
||||||
|
#endif
|
||||||
|
|
@ -0,0 +1,65 @@
|
||||||
|
!* ------------------------------------------------------------------------- *
|
||||||
|
!* CGNS - CFD General Notation System (http://www.cgns.org) *
|
||||||
|
!* CGNS/MLL - Mid-Level Library header file *
|
||||||
|
!* Please see cgnsconfig.h file for this local installation configuration *
|
||||||
|
!* ------------------------------------------------------------------------- *
|
||||||
|
!
|
||||||
|
!* ------------------------------------------------------------------------- *
|
||||||
|
!
|
||||||
|
! This software is provided 'as-is', without any express or implied warranty.
|
||||||
|
! In no event will the authors be held liable for any damages arising from
|
||||||
|
! the use of this software.
|
||||||
|
!
|
||||||
|
! Permission is granted to anyone to use this software for any purpose,
|
||||||
|
! including commercial applications, and to alter it and redistribute it
|
||||||
|
! freely, subject to the following restrictions:
|
||||||
|
!
|
||||||
|
! 1. The origin of this software must not be misrepresented; you must not
|
||||||
|
! claim that you wrote the original software. If you use this software
|
||||||
|
! in a product, an acknowledgment in the product documentation would be
|
||||||
|
! appreciated but is not required.
|
||||||
|
!
|
||||||
|
! 2. Altered source versions must be plainly marked as such, and must not
|
||||||
|
! be misrepresented as being the original software.
|
||||||
|
!
|
||||||
|
! 3. This notice may not be removed or altered from any source distribution.
|
||||||
|
!
|
||||||
|
!* ------------------------------------------------------------------------- *
|
||||||
|
|
||||||
|
#ifndef CGNSTYPES_F_H
|
||||||
|
#define CGNSTYPES_F_H
|
||||||
|
|
||||||
|
#define CG_BUILD_PARALLEL_F 0
|
||||||
|
#define CG_BUILD_64BIT_F 1
|
||||||
|
!#define HAVE_FORTRAN_2003 0
|
||||||
|
#define HAVE_FORTRAN_2003 0
|
||||||
|
|
||||||
|
#if HAVE_FORTRAN_2003
|
||||||
|
# if CG_BUILD_64BIT_F
|
||||||
|
# define cgsize_t INTEGER(KIND=C_LONG_LONG)
|
||||||
|
# define CGSIZE_T INTEGER(KIND=C_LONG_LONG)
|
||||||
|
# else
|
||||||
|
# define cgsize_t INTEGER(KIND=C_INT)
|
||||||
|
# define CGSIZE_T INTEGER(KIND=C_INT)
|
||||||
|
# endif
|
||||||
|
|
||||||
|
# define cglong_t INTEGER(KIND=C_LONG_LONG)
|
||||||
|
# define CGLONG_T INTEGER(KIND=C_LONG_LONG)
|
||||||
|
# define cgid_t REAL(KIND=C_DOUBLE)
|
||||||
|
# define CGID_T REAL(KIND=C_DOUBLE)
|
||||||
|
#else
|
||||||
|
# if CG_BUILD_64BIT_F
|
||||||
|
# define cgsize_t integer*8
|
||||||
|
# define CGSIZE_T integer*8
|
||||||
|
# else
|
||||||
|
# define cgsize_t integer*4
|
||||||
|
# define CGSIZE_T integer*4
|
||||||
|
# endif
|
||||||
|
|
||||||
|
# define cglong_t integer*8
|
||||||
|
# define CGLONG_T integer*8
|
||||||
|
# define cgid_t real*8
|
||||||
|
# define CGID_T real*8
|
||||||
|
#endif
|
||||||
|
#endif
|
||||||
|
|
||||||
|
|
@ -0,0 +1,70 @@
|
||||||
|
!* ------------------------------------------------------------------------- *
|
||||||
|
!* CGNS - CFD General Notation System (http://www.cgns.org) *
|
||||||
|
!* CGNS/MLL - Mid-Level Library header file *
|
||||||
|
!* Please see cgnsconfig.h file for this local installation configuration *
|
||||||
|
!* ------------------------------------------------------------------------- *
|
||||||
|
!
|
||||||
|
!* ------------------------------------------------------------------------- *
|
||||||
|
!
|
||||||
|
! This software is provided 'as-is', without any express or implied warranty.
|
||||||
|
! In no event will the authors be held liable for any damages arising from
|
||||||
|
! the use of this software.
|
||||||
|
!
|
||||||
|
! Permission is granted to anyone to use this software for any purpose,
|
||||||
|
! including commercial applications, and to alter it and redistribute it
|
||||||
|
! freely, subject to the following restrictions:
|
||||||
|
!
|
||||||
|
! 1. The origin of this software must not be misrepresented; you must not
|
||||||
|
! claim that you wrote the original software. If you use this software
|
||||||
|
! in a product, an acknowledgment in the product documentation would be
|
||||||
|
! appreciated but is not required.
|
||||||
|
!
|
||||||
|
! 2. Altered source versions must be plainly marked as such, and must not
|
||||||
|
! be misrepresented as being the original software.
|
||||||
|
!
|
||||||
|
! 3. This notice may not be removed or altered from any source distribution.
|
||||||
|
!
|
||||||
|
!* ------------------------------------------------------------------------- *
|
||||||
|
|
||||||
|
#ifndef CGNSTYPES_F03_H
|
||||||
|
#define CGNSTYPES_F03_H
|
||||||
|
|
||||||
|
#define CG_BUILD_PARALLEL_F 0
|
||||||
|
#define CG_BUILD_64BIT_F 1
|
||||||
|
#define HAVE_FORTRAN_95 0
|
||||||
|
#define HAVE_FORTRAN_2003 0
|
||||||
|
#define HAVE_FORTRAN_2008TS 0
|
||||||
|
#define HDF5_HAVE_MULTI_DATASETS 0
|
||||||
|
|
||||||
|
#define CG_BUILD_HDF5 1
|
||||||
|
|
||||||
|
#define CG_BUILD_SCOPE 0
|
||||||
|
|
||||||
|
#define CGNS_BASESCOPE 0
|
||||||
|
|
||||||
|
#if CG_BUILD_SCOPE
|
||||||
|
# ifndef CGNS_SCOPE_ENUMS
|
||||||
|
# define CGNS_SCOPE_ENUMS
|
||||||
|
# endif
|
||||||
|
#else
|
||||||
|
# ifdef CGNS_SCOPE_ENUMS
|
||||||
|
# undef CGNS_SCOPE_ENUMS
|
||||||
|
# endif
|
||||||
|
#endif
|
||||||
|
|
||||||
|
#ifdef __GFORTRAN__
|
||||||
|
#define PASTE(a) a
|
||||||
|
#define CONCATENATE(a,b) PASTE(a)b
|
||||||
|
#else
|
||||||
|
#define PASTE(a,b) a ## b
|
||||||
|
#define CONCATENATE(a,b) PASTE(a,b)
|
||||||
|
#endif
|
||||||
|
|
||||||
|
#ifdef CGNS_SCOPE_ENUMS
|
||||||
|
! set scope prefix (case does not matter in Fortran)
|
||||||
|
#define CGNS_ENUMV(x) CONCATENATE(CG_,x)
|
||||||
|
#else
|
||||||
|
#define CGNS_ENUMV(x) x
|
||||||
|
#endif
|
||||||
|
|
||||||
|
#endif
|
||||||
|
|
@ -0,0 +1,5 @@
|
||||||
|
!DEC$ ATTRIBUTES REFERENCE, C, VARYING :: cg_goto_f
|
||||||
|
!DEC$ ATTRIBUTES REFERENCE, C, VARYING :: cg_array_read_f
|
||||||
|
!DEC$ ATTRIBUTES REFERENCE, C, VARYING :: cg_array_read_as_f
|
||||||
|
!DEC$ ATTRIBUTES REFERENCE, C, VARYING :: cg_array_write_f
|
||||||
|
|
||||||
Binary file not shown.
Binary file not shown.
|
|
@ -0,0 +1,29 @@
|
||||||
|
#----------------------------------------------------------------
|
||||||
|
# Generated CMake target import file for configuration "Release".
|
||||||
|
#----------------------------------------------------------------
|
||||||
|
|
||||||
|
# Commands may need to know the format version.
|
||||||
|
set(CMAKE_IMPORT_FILE_VERSION 1)
|
||||||
|
|
||||||
|
# Import target "CGNS::cgns_static" for configuration "Release"
|
||||||
|
set_property(TARGET CGNS::cgns_static APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(CGNS::cgns_static PROPERTIES
|
||||||
|
IMPORTED_LINK_INTERFACE_LANGUAGES_RELEASE "C"
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/lib/cgns.lib"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS CGNS::cgns_static )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_CGNS::cgns_static "${_IMPORT_PREFIX}/lib/cgns.lib" )
|
||||||
|
|
||||||
|
# Import target "CGNS::cgns_shared" for configuration "Release"
|
||||||
|
set_property(TARGET CGNS::cgns_shared APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(CGNS::cgns_shared PROPERTIES
|
||||||
|
IMPORTED_IMPLIB_RELEASE "${_IMPORT_PREFIX}/lib/cgnsdll.lib"
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/cgnsdll.dll"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS CGNS::cgns_shared )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_CGNS::cgns_shared "${_IMPORT_PREFIX}/lib/cgnsdll.lib" "${_IMPORT_PREFIX}/bin/cgnsdll.dll" )
|
||||||
|
|
||||||
|
# Commands beyond this point should not need to know the version.
|
||||||
|
set(CMAKE_IMPORT_FILE_VERSION)
|
||||||
|
|
@ -0,0 +1,108 @@
|
||||||
|
# Generated by CMake
|
||||||
|
|
||||||
|
if("${CMAKE_MAJOR_VERSION}.${CMAKE_MINOR_VERSION}" LESS 2.6)
|
||||||
|
message(FATAL_ERROR "CMake >= 2.6.0 required")
|
||||||
|
endif()
|
||||||
|
cmake_policy(PUSH)
|
||||||
|
cmake_policy(VERSION 2.6...3.21)
|
||||||
|
#----------------------------------------------------------------
|
||||||
|
# Generated CMake target import file.
|
||||||
|
#----------------------------------------------------------------
|
||||||
|
|
||||||
|
# Commands may need to know the format version.
|
||||||
|
set(CMAKE_IMPORT_FILE_VERSION 1)
|
||||||
|
|
||||||
|
# Protect against multiple inclusion, which would fail when already imported targets are added once more.
|
||||||
|
set(_targetsDefined)
|
||||||
|
set(_targetsNotDefined)
|
||||||
|
set(_expectedTargets)
|
||||||
|
foreach(_expectedTarget CGNS::cgns_static CGNS::cgns_shared)
|
||||||
|
list(APPEND _expectedTargets ${_expectedTarget})
|
||||||
|
if(NOT TARGET ${_expectedTarget})
|
||||||
|
list(APPEND _targetsNotDefined ${_expectedTarget})
|
||||||
|
endif()
|
||||||
|
if(TARGET ${_expectedTarget})
|
||||||
|
list(APPEND _targetsDefined ${_expectedTarget})
|
||||||
|
endif()
|
||||||
|
endforeach()
|
||||||
|
if("${_targetsDefined}" STREQUAL "${_expectedTargets}")
|
||||||
|
unset(_targetsDefined)
|
||||||
|
unset(_targetsNotDefined)
|
||||||
|
unset(_expectedTargets)
|
||||||
|
set(CMAKE_IMPORT_FILE_VERSION)
|
||||||
|
cmake_policy(POP)
|
||||||
|
return()
|
||||||
|
endif()
|
||||||
|
if(NOT "${_targetsDefined}" STREQUAL "")
|
||||||
|
message(FATAL_ERROR "Some (but not all) targets in this export set were already defined.\nTargets Defined: ${_targetsDefined}\nTargets not yet defined: ${_targetsNotDefined}\n")
|
||||||
|
endif()
|
||||||
|
unset(_targetsDefined)
|
||||||
|
unset(_targetsNotDefined)
|
||||||
|
unset(_expectedTargets)
|
||||||
|
|
||||||
|
|
||||||
|
# Compute the installation prefix relative to this file.
|
||||||
|
get_filename_component(_IMPORT_PREFIX "${CMAKE_CURRENT_LIST_FILE}" PATH)
|
||||||
|
get_filename_component(_IMPORT_PREFIX "${_IMPORT_PREFIX}" PATH)
|
||||||
|
get_filename_component(_IMPORT_PREFIX "${_IMPORT_PREFIX}" PATH)
|
||||||
|
get_filename_component(_IMPORT_PREFIX "${_IMPORT_PREFIX}" PATH)
|
||||||
|
if(_IMPORT_PREFIX STREQUAL "/")
|
||||||
|
set(_IMPORT_PREFIX "")
|
||||||
|
endif()
|
||||||
|
|
||||||
|
# Create imported target CGNS::cgns_static
|
||||||
|
add_library(CGNS::cgns_static STATIC IMPORTED)
|
||||||
|
|
||||||
|
set_target_properties(CGNS::cgns_static PROPERTIES
|
||||||
|
INTERFACE_INCLUDE_DIRECTORIES "${_IMPORT_PREFIX}/include;${_IMPORT_PREFIX}/include"
|
||||||
|
INTERFACE_LINK_LIBRARIES "\$<LINK_ONLY:\$<\$<BOOL:ON>:hdf5::hdf5-shared>>"
|
||||||
|
)
|
||||||
|
|
||||||
|
# Create imported target CGNS::cgns_shared
|
||||||
|
add_library(CGNS::cgns_shared SHARED IMPORTED)
|
||||||
|
|
||||||
|
set_target_properties(CGNS::cgns_shared PROPERTIES
|
||||||
|
INTERFACE_COMPILE_DEFINITIONS "USE_DLL"
|
||||||
|
INTERFACE_INCLUDE_DIRECTORIES "${_IMPORT_PREFIX}/include;${_IMPORT_PREFIX}/include"
|
||||||
|
INTERFACE_LINK_LIBRARIES "hdf5::hdf5-shared;\$<\$<NOT:\$<PLATFORM_ID:Windows>>:>"
|
||||||
|
)
|
||||||
|
|
||||||
|
if(CMAKE_VERSION VERSION_LESS 2.8.12)
|
||||||
|
message(FATAL_ERROR "This file relies on consumers using CMake 2.8.12 or greater.")
|
||||||
|
endif()
|
||||||
|
|
||||||
|
# Load information for each installed configuration.
|
||||||
|
get_filename_component(_DIR "${CMAKE_CURRENT_LIST_FILE}" PATH)
|
||||||
|
file(GLOB CONFIG_FILES "${_DIR}/cgns-targets-*.cmake")
|
||||||
|
foreach(f ${CONFIG_FILES})
|
||||||
|
include(${f})
|
||||||
|
endforeach()
|
||||||
|
|
||||||
|
# Cleanup temporary variables.
|
||||||
|
set(_IMPORT_PREFIX)
|
||||||
|
|
||||||
|
# Loop over all imported files and verify that they actually exist
|
||||||
|
foreach(target ${_IMPORT_CHECK_TARGETS} )
|
||||||
|
foreach(file ${_IMPORT_CHECK_FILES_FOR_${target}} )
|
||||||
|
if(NOT EXISTS "${file}" )
|
||||||
|
message(FATAL_ERROR "The imported target \"${target}\" references the file
|
||||||
|
\"${file}\"
|
||||||
|
but this file does not exist. Possible reasons include:
|
||||||
|
* The file was deleted, renamed, or moved to another location.
|
||||||
|
* An install or uninstall procedure did not complete successfully.
|
||||||
|
* The installation package was faulty and contained
|
||||||
|
\"${CMAKE_CURRENT_LIST_FILE}\"
|
||||||
|
but not all the files it references.
|
||||||
|
")
|
||||||
|
endif()
|
||||||
|
endforeach()
|
||||||
|
unset(_IMPORT_CHECK_FILES_FOR_${target})
|
||||||
|
endforeach()
|
||||||
|
unset(_IMPORT_CHECK_TARGETS)
|
||||||
|
|
||||||
|
# This file does not depend on other imported targets which have
|
||||||
|
# been exported from the same project but in a separate export set.
|
||||||
|
|
||||||
|
# Commands beyond this point should not need to know the version.
|
||||||
|
set(CMAKE_IMPORT_FILE_VERSION)
|
||||||
|
cmake_policy(POP)
|
||||||
Binary file not shown.
|
|
@ -0,0 +1,106 @@
|
||||||
|
Copyright Notice and License Terms for
|
||||||
|
HDF5 (Hierarchical Data Format 5) Software Library and Utilities
|
||||||
|
-----------------------------------------------------------------------------
|
||||||
|
|
||||||
|
HDF5 (Hierarchical Data Format 5) Software Library and Utilities
|
||||||
|
Copyright 2006 by The HDF Group.
|
||||||
|
|
||||||
|
NCSA HDF5 (Hierarchical Data Format 5) Software Library and Utilities
|
||||||
|
Copyright 1998-2006 by The Board of Trustees of the University of Illinois.
|
||||||
|
|
||||||
|
All rights reserved.
|
||||||
|
|
||||||
|
Redistribution and use in source and binary forms, with or without
|
||||||
|
modification, are permitted for any purpose (including commercial purposes)
|
||||||
|
provided that the following conditions are met:
|
||||||
|
|
||||||
|
1. Redistributions of source code must retain the above copyright notice,
|
||||||
|
this list of conditions, and the following disclaimer.
|
||||||
|
|
||||||
|
2. Redistributions in binary form must reproduce the above copyright notice,
|
||||||
|
this list of conditions, and the following disclaimer in the documentation
|
||||||
|
and/or materials provided with the distribution.
|
||||||
|
|
||||||
|
3. Neither the name of The HDF Group, the name of the University, nor the
|
||||||
|
name of any Contributor may be used to endorse or promote products derived
|
||||||
|
from this software without specific prior written permission from
|
||||||
|
The HDF Group, the University, or the Contributor, respectively.
|
||||||
|
|
||||||
|
DISCLAIMER:
|
||||||
|
THIS SOFTWARE IS PROVIDED BY THE HDF GROUP AND THE CONTRIBUTORS
|
||||||
|
"AS IS" WITH NO WARRANTY OF ANY KIND, EITHER EXPRESSED OR IMPLIED. IN NO
|
||||||
|
EVENT SHALL THE HDF GROUP OR THE CONTRIBUTORS BE LIABLE FOR ANY DAMAGES
|
||||||
|
SUFFERED BY THE USERS ARISING OUT OF THE USE OF THIS SOFTWARE, EVEN IF
|
||||||
|
ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
|
||||||
|
|
||||||
|
You are under no obligation whatsoever to provide any bug fixes, patches, or
|
||||||
|
upgrades to the features, functionality or performance of the source code
|
||||||
|
("Enhancements") to anyone; however, if you choose to make your Enhancements
|
||||||
|
available either publicly, or directly to The HDF Group, without imposing a
|
||||||
|
separate written license agreement for such Enhancements, then you hereby
|
||||||
|
grant the following license: a non-exclusive, royalty-free perpetual license
|
||||||
|
to install, use, modify, prepare derivative works, incorporate into other
|
||||||
|
computer software, distribute, and sublicense such enhancements or derivative
|
||||||
|
works thereof, in binary and source code form.
|
||||||
|
|
||||||
|
-----------------------------------------------------------------------------
|
||||||
|
-----------------------------------------------------------------------------
|
||||||
|
|
||||||
|
Limited portions of HDF5 were developed by Lawrence Berkeley National
|
||||||
|
Laboratory (LBNL). LBNL's Copyright Notice and Licensing Terms can be
|
||||||
|
found here: COPYING_LBNL_HDF5 file in this directory or at
|
||||||
|
http://support.hdfgroup.org/ftp/HDF5/releases/COPYING_LBNL_HDF5.
|
||||||
|
|
||||||
|
-----------------------------------------------------------------------------
|
||||||
|
-----------------------------------------------------------------------------
|
||||||
|
|
||||||
|
Contributors: National Center for Supercomputing Applications (NCSA) at
|
||||||
|
the University of Illinois, Fortner Software, Unidata Program Center
|
||||||
|
(netCDF), The Independent JPEG Group (JPEG), Jean-loup Gailly and Mark Adler
|
||||||
|
(gzip), and Digital Equipment Corporation (DEC).
|
||||||
|
|
||||||
|
-----------------------------------------------------------------------------
|
||||||
|
|
||||||
|
Portions of HDF5 were developed with support from the Lawrence Berkeley
|
||||||
|
National Laboratory (LBNL) and the United States Department of Energy
|
||||||
|
under Prime Contract No. DE-AC02-05CH11231.
|
||||||
|
|
||||||
|
-----------------------------------------------------------------------------
|
||||||
|
|
||||||
|
Portions of HDF5 were developed with support from Lawrence Livermore
|
||||||
|
National Laboratory and the United States Department of Energy under
|
||||||
|
Prime Contract No. DE-AC52-07NA27344.
|
||||||
|
|
||||||
|
-----------------------------------------------------------------------------
|
||||||
|
|
||||||
|
Portions of HDF5 were developed with support from the University of
|
||||||
|
California, Lawrence Livermore National Laboratory (UC LLNL).
|
||||||
|
The following statement applies to those portions of the product and must
|
||||||
|
be retained in any redistribution of source code, binaries, documentation,
|
||||||
|
and/or accompanying materials:
|
||||||
|
|
||||||
|
This work was partially produced at the University of California,
|
||||||
|
Lawrence Livermore National Laboratory (UC LLNL) under contract
|
||||||
|
no. W-7405-ENG-48 (Contract 48) between the U.S. Department of Energy
|
||||||
|
(DOE) and The Regents of the University of California (University)
|
||||||
|
for the operation of UC LLNL.
|
||||||
|
|
||||||
|
DISCLAIMER:
|
||||||
|
THIS WORK WAS PREPARED AS AN ACCOUNT OF WORK SPONSORED BY AN AGENCY OF
|
||||||
|
THE UNITED STATES GOVERNMENT. NEITHER THE UNITED STATES GOVERNMENT NOR
|
||||||
|
THE UNIVERSITY OF CALIFORNIA NOR ANY OF THEIR EMPLOYEES, MAKES ANY
|
||||||
|
WARRANTY, EXPRESS OR IMPLIED, OR ASSUMES ANY LIABILITY OR RESPONSIBILITY
|
||||||
|
FOR THE ACCURACY, COMPLETENESS, OR USEFULNESS OF ANY INFORMATION,
|
||||||
|
APPARATUS, PRODUCT, OR PROCESS DISCLOSED, OR REPRESENTS THAT ITS USE
|
||||||
|
WOULD NOT INFRINGE PRIVATELY- OWNED RIGHTS. REFERENCE HEREIN TO ANY
|
||||||
|
SPECIFIC COMMERCIAL PRODUCTS, PROCESS, OR SERVICE BY TRADE NAME,
|
||||||
|
TRADEMARK, MANUFACTURER, OR OTHERWISE, DOES NOT NECESSARILY CONSTITUTE
|
||||||
|
OR IMPLY ITS ENDORSEMENT, RECOMMENDATION, OR FAVORING BY THE UNITED
|
||||||
|
STATES GOVERNMENT OR THE UNIVERSITY OF CALIFORNIA. THE VIEWS AND
|
||||||
|
OPINIONS OF AUTHORS EXPRESSED HEREIN DO NOT NECESSARILY STATE OR REFLECT
|
||||||
|
THOSE OF THE UNITED STATES GOVERNMENT OR THE UNIVERSITY OF CALIFORNIA,
|
||||||
|
AND SHALL NOT BE USED FOR ADVERTISING OR PRODUCT ENDORSEMENT PURPOSES.
|
||||||
|
|
||||||
|
-----------------------------------------------------------------------------
|
||||||
|
|
||||||
|
|
||||||
|
|
@ -0,0 +1,475 @@
|
||||||
|
HDF5 version 1.13.1 released on 2022-03-02
|
||||||
|
================================================================================
|
||||||
|
|
||||||
|
|
||||||
|
INTRODUCTION
|
||||||
|
============
|
||||||
|
|
||||||
|
This document describes the differences between this release and the previous
|
||||||
|
HDF5 release. It contains information on the platforms tested and known
|
||||||
|
problems in this release. For more details check the HISTORY*.txt files in the
|
||||||
|
HDF5 source.
|
||||||
|
|
||||||
|
Note that documentation in the links below will be updated at the time of each
|
||||||
|
final release.
|
||||||
|
|
||||||
|
Links to HDF5 documentation can be found on The HDF5 web page:
|
||||||
|
|
||||||
|
https://portal.hdfgroup.org/display/HDF5/HDF5
|
||||||
|
|
||||||
|
The official HDF5 releases can be obtained from:
|
||||||
|
|
||||||
|
https://www.hdfgroup.org/downloads/hdf5/
|
||||||
|
|
||||||
|
Changes from Release to Release and New Features in the HDF5-1.13.x release series
|
||||||
|
can be found at:
|
||||||
|
|
||||||
|
https://portal.hdfgroup.org/display/HDF5/HDF5+Application+Developer%27s+Guide
|
||||||
|
|
||||||
|
If you have any questions or comments, please send them to the HDF Help Desk:
|
||||||
|
|
||||||
|
help@hdfgroup.org
|
||||||
|
|
||||||
|
|
||||||
|
CONTENTS
|
||||||
|
========
|
||||||
|
|
||||||
|
- New Features
|
||||||
|
- Support for new platforms and languages
|
||||||
|
- Bug Fixes since HDF5-1.13.0
|
||||||
|
- Platforms Tested
|
||||||
|
- Known Problems
|
||||||
|
- CMake vs. Autotools installations
|
||||||
|
|
||||||
|
|
||||||
|
New Features
|
||||||
|
============
|
||||||
|
|
||||||
|
Configuration:
|
||||||
|
-------------
|
||||||
|
- CPack will now generate RPM/DEB packages.
|
||||||
|
|
||||||
|
Enabled the RPM and DEB CPack generators on linux. In addition to
|
||||||
|
generating STGZ and TGZ packages, CPack will try to package the
|
||||||
|
library for RPM and DEB packages. This is the initial attempt and
|
||||||
|
may change as issues are resolved.
|
||||||
|
|
||||||
|
(ADB - 2022/01/27)
|
||||||
|
|
||||||
|
- Added new option to the h5cc scripts produced by CMake.
|
||||||
|
|
||||||
|
Add -showconfig option to h5cc scripts to cat the
|
||||||
|
libhdf5.settings file to the standard output.
|
||||||
|
|
||||||
|
(ADB - 2022/01/25)
|
||||||
|
|
||||||
|
- CMake will now run the PowerShell script tests in test/ by default
|
||||||
|
on Windows.
|
||||||
|
|
||||||
|
The test directory includes several shell script tests that previously
|
||||||
|
were not run by CMake on Windows. These are now run by default.
|
||||||
|
If TEST_SHELL_SCRIPTS is ON and PWSH is found, the PowerShell scripts
|
||||||
|
will execute. Similar to the bash scripts on unix platforms.
|
||||||
|
|
||||||
|
(ADB - 2021/11/23)
|
||||||
|
|
||||||
|
|
||||||
|
Library:
|
||||||
|
--------
|
||||||
|
- Add a new public function, H5ESget_requests()
|
||||||
|
|
||||||
|
This function allows the user to retrieve request pointers from an event
|
||||||
|
set. It is intended for use primarily by VOL plugin developers.
|
||||||
|
|
||||||
|
(NAF - 2022/01/11)
|
||||||
|
|
||||||
|
|
||||||
|
Parallel Library:
|
||||||
|
-----------------
|
||||||
|
- Several improvements to parallel compression feature, including:
|
||||||
|
|
||||||
|
* Improved support for collective I/O (for both writes and reads)
|
||||||
|
|
||||||
|
* Significant reduction of memory usage for the feature as a whole
|
||||||
|
|
||||||
|
* Reduction of copying of application data buffers passed to H5Dwrite
|
||||||
|
|
||||||
|
* Addition of support for incremental file space allocation for filtered
|
||||||
|
datasets created in parallel. Incremental file space allocation is the
|
||||||
|
default for these types of datasets (early file space allocation is
|
||||||
|
also still supported), while early file space allocation is still the
|
||||||
|
default (and only supported at allocation time) for unfiltered datasets
|
||||||
|
created in parallel. Incremental file space allocation should help with
|
||||||
|
parallel HDF5 applications that wish to use fill values on filtered
|
||||||
|
datasets, but would typically avoid doing so since dataset creation in
|
||||||
|
parallel would often take an excessive amount of time. Since these
|
||||||
|
datasets previously used early file space allocation, HDF5 would
|
||||||
|
allocate space for and write fill values to every chunk in the dataset
|
||||||
|
at creation time, leading to noticeable overhead. Instead, with
|
||||||
|
incremental file space allocation, allocation of file space for chunks
|
||||||
|
and writing of fill values to those chunks will be delayed until each
|
||||||
|
individual chunk is initially written to.
|
||||||
|
|
||||||
|
* Addition of support for HDF5's "don't filter partial edge chunks" flag
|
||||||
|
(https://portal.hdfgroup.org/display/HDF5/H5P_SET_CHUNK_OPTS)
|
||||||
|
|
||||||
|
* Addition of proper support for HDF5 fill values with the feature
|
||||||
|
|
||||||
|
* Addition of 'H5_HAVE_PARALLEL_FILTERED_WRITES' macro to H5pubconf.h
|
||||||
|
so HDF5 applications can determine at compile-time whether the feature
|
||||||
|
is available
|
||||||
|
|
||||||
|
* Addition of simple examples (ph5_filtered_writes.c and
|
||||||
|
ph5_filtered_writes_no_sel.c) under examples directory to demonstrate
|
||||||
|
usage of the feature
|
||||||
|
|
||||||
|
* Improved coverage of regression testing for the feature
|
||||||
|
|
||||||
|
(JTH - 2022/2/23)
|
||||||
|
|
||||||
|
Fortran Library:
|
||||||
|
----------------
|
||||||
|
-
|
||||||
|
|
||||||
|
|
||||||
|
C++ Library:
|
||||||
|
------------
|
||||||
|
-
|
||||||
|
|
||||||
|
|
||||||
|
Java Library:
|
||||||
|
-------------
|
||||||
|
-
|
||||||
|
|
||||||
|
|
||||||
|
Tools:
|
||||||
|
------
|
||||||
|
-
|
||||||
|
|
||||||
|
|
||||||
|
High-Level APIs:
|
||||||
|
----------------
|
||||||
|
-
|
||||||
|
|
||||||
|
|
||||||
|
C Packet Table API:
|
||||||
|
-------------------
|
||||||
|
-
|
||||||
|
|
||||||
|
|
||||||
|
Internal header file:
|
||||||
|
---------------------
|
||||||
|
-
|
||||||
|
|
||||||
|
|
||||||
|
Documentation:
|
||||||
|
--------------
|
||||||
|
-
|
||||||
|
|
||||||
|
|
||||||
|
Support for new platforms, languages and compilers
|
||||||
|
==================================================
|
||||||
|
-
|
||||||
|
|
||||||
|
|
||||||
|
Bug Fixes since HDF5-1.13.0 release
|
||||||
|
===================================
|
||||||
|
Library
|
||||||
|
-------
|
||||||
|
- Fixed a metadata cache bug when resizing a pinned/protected cache entry
|
||||||
|
|
||||||
|
When resizing a pinned/protected cache entry, the metadata
|
||||||
|
cache code previously would wait until after resizing the
|
||||||
|
entry to attempt to log the newly-dirtied entry. This
|
||||||
|
caused H5C_resize_entry to mark the entry as dirty and made
|
||||||
|
H5AC_resize_entry think that it didn't need to add the
|
||||||
|
newly-dirtied entry to the dirty entries skiplist.
|
||||||
|
|
||||||
|
Thus, a subsequent H5AC__log_moved_entry would think it
|
||||||
|
needed to allocate a new entry for insertion into the dirty
|
||||||
|
entry skip list, since the entry didGn't exist on that list.
|
||||||
|
This caused an assertion failure, as the code to allocate a
|
||||||
|
new entry assumes that the entry is not dirty.
|
||||||
|
|
||||||
|
(JRM - 2022/02/28)
|
||||||
|
|
||||||
|
- Issue #1436 identified a problem with the H5_VERS_RELEASE check in the
|
||||||
|
H5check_version function.
|
||||||
|
|
||||||
|
Investigating the original fix, #812, we discovered some inconsistencies
|
||||||
|
with a new block added to check H5_VERS_RELEASE for incompatibilities.
|
||||||
|
This new block was not using the new warning text dealing with the
|
||||||
|
H5_VERS_RELEASE check and would cause the warning to be duplicated.
|
||||||
|
|
||||||
|
By removing the H5_VERS_RELEASE argument in the first check for
|
||||||
|
H5_VERS_MAJOR and H5_VERS_MINOR, the second check would only check
|
||||||
|
the H5_VERS_RELEASE for incompatible release versions. This adheres
|
||||||
|
to the statement that except for the develop branch, all release versions
|
||||||
|
in a major.minor maintenance branch should be compatible. The prerequisite
|
||||||
|
is that an application will not use any APIs not present in all release versions.
|
||||||
|
|
||||||
|
(ADB - 2022/02/24, #1438)
|
||||||
|
|
||||||
|
- Unified handling of collective metadata reads to correctly fix old bugs
|
||||||
|
|
||||||
|
Due to MPI-related issues occurring in HDF5 from mismanagement of the
|
||||||
|
status of collective metadata reads, they were forced to be disabled
|
||||||
|
during chunked dataset raw data I/O in the HDF5 1.10.5 release. This
|
||||||
|
wouldn't generally have affected application performance because HDF5
|
||||||
|
already disables collective metadata reads during chunk lookup, since
|
||||||
|
it is generally unlikely that the same chunks will be read by all MPI
|
||||||
|
ranks in the I/O operation. However, this was only a partial solution
|
||||||
|
that wasn't granular enough.
|
||||||
|
|
||||||
|
This change now unifies the handling of the file-global flag and the
|
||||||
|
API context-level flag for collective metadata reads in order to
|
||||||
|
simplify querying of the true status of collective metadata reads. Thus,
|
||||||
|
collective metadata reads are once again enabled for chunked dataset
|
||||||
|
raw data I/O, but manually controlled at places where some processing
|
||||||
|
occurs on MPI rank 0 only and would cause issues when collective
|
||||||
|
metadata reads are enabled.
|
||||||
|
|
||||||
|
(JTH - 2021/11/16, HDFFV-10501/HDFFV-10562)
|
||||||
|
|
||||||
|
- Fixed several potential MPI deadlocks in library failure conditions
|
||||||
|
|
||||||
|
In the parallel library, there were several places where MPI rank 0
|
||||||
|
could end up skipping past collective MPI operations when some failure
|
||||||
|
occurs in rank 0-specific processing. This would lead to deadlocks
|
||||||
|
where rank 0 completes an operation while other ranks wait in the
|
||||||
|
collective operation. These places have been rewritten to have rank 0
|
||||||
|
push an error and try to cleanup after the failure, then continue to
|
||||||
|
participate in the collective operation to the best of its ability.
|
||||||
|
|
||||||
|
(JTH - 2021/11/09)
|
||||||
|
|
||||||
|
|
||||||
|
Java Library
|
||||||
|
------------
|
||||||
|
-
|
||||||
|
|
||||||
|
|
||||||
|
Configuration
|
||||||
|
-------------
|
||||||
|
-
|
||||||
|
|
||||||
|
|
||||||
|
Tools
|
||||||
|
-----
|
||||||
|
-
|
||||||
|
|
||||||
|
|
||||||
|
Performance
|
||||||
|
-------------
|
||||||
|
-
|
||||||
|
|
||||||
|
|
||||||
|
Fortran API
|
||||||
|
-----------
|
||||||
|
-
|
||||||
|
|
||||||
|
|
||||||
|
High-Level Library
|
||||||
|
------------------
|
||||||
|
-
|
||||||
|
|
||||||
|
|
||||||
|
Fortran High-Level APIs
|
||||||
|
-----------------------
|
||||||
|
-
|
||||||
|
|
||||||
|
|
||||||
|
Documentation
|
||||||
|
-------------
|
||||||
|
-
|
||||||
|
|
||||||
|
|
||||||
|
F90 APIs
|
||||||
|
--------
|
||||||
|
-
|
||||||
|
|
||||||
|
|
||||||
|
C++ APIs
|
||||||
|
--------
|
||||||
|
-
|
||||||
|
|
||||||
|
|
||||||
|
Platforms Tested
|
||||||
|
===================
|
||||||
|
|
||||||
|
Linux 5.13.14-200.fc34 GNU gcc (GCC) 11.2.1 2021078 (Red Hat 11.2.1-1)
|
||||||
|
#1 SMP x86_64 GNU/Linux GNU Fortran (GCC) 11.2.1 2021078 (Red Hat 11.2.1-1)
|
||||||
|
Fedora34 clang version 12.0.1 (Fedora 12.0.1-1.fc34)
|
||||||
|
(cmake and autotools)
|
||||||
|
|
||||||
|
Linux 5.11.0-34-generic GNU gcc (GCC) 9.3.0-17ubuntu1
|
||||||
|
#36-Ubuntu SMP x86_64 GNU/Linux GNU Fortran (GCC) 9.3.0-17ubuntu1
|
||||||
|
Ubuntu 20.04 Ubuntu clang version 10.0.0-4
|
||||||
|
(cmake and autotools)
|
||||||
|
|
||||||
|
Linux 5.8.0-63-generic GNU gcc (GCC) 10.3.0-1ubuntu1
|
||||||
|
#71-Ubuntu SMP x86_64 GNU/Linux GNU Fortran (GCC) 10.3.0-1ubuntu1
|
||||||
|
Ubuntu20.10 Ubuntu clang version 11.0.0-2
|
||||||
|
(cmake and autotools)
|
||||||
|
|
||||||
|
Linux 5.3.18-22-default GNU gcc (SUSE Linux) 7.5.0
|
||||||
|
#1 SMP x86_64 GNU/Linux GNU Fortran (SUSE Linux) 7.5.0
|
||||||
|
SUSE15sp2 clang version 7.0.1 (tags/RELEASE_701/final 349238)
|
||||||
|
(cmake and autotools)
|
||||||
|
|
||||||
|
Linux-4.14.0-115.21.2 spectrum-mpi/rolling-release
|
||||||
|
#1 SMP ppc64le GNU/Linux clang 8.0.1, 11.0.1
|
||||||
|
(lassen) GCC 7.3.1
|
||||||
|
XL 16.1.1.2
|
||||||
|
(cmake)
|
||||||
|
|
||||||
|
Linux-3.10.0-1160.49.1 openmpi-intel/4.1
|
||||||
|
#1 SMP x86_64 GNU/Linux Intel(R) Version 18.0.5, 19.1.2
|
||||||
|
(chama) (cmake)
|
||||||
|
|
||||||
|
Linux-4.12.14-150.75-default cray-mpich/7.7.10
|
||||||
|
#1 SMP x86_64 GNU/Linux GCC 7.3.0, 8.2.0
|
||||||
|
(cori) Intel (R) Version 19.0.3.199
|
||||||
|
(cmake)
|
||||||
|
|
||||||
|
Linux-4.12.14-197.86-default cray-mpich/7.7.6
|
||||||
|
# 1SMP x86_64 GNU/Linux GCC 7.3.0, 9.3.0, 10.2.0
|
||||||
|
(mutrino) Intel (R) Version 17.0.4, 18.0.5, 19.1.3
|
||||||
|
(cmake)
|
||||||
|
|
||||||
|
Linux 3.10.0-1160.36.2.el7.ppc64 gcc (GCC) 4.8.5 20150623 (Red Hat 4.8.5-39)
|
||||||
|
#1 SMP ppc64be GNU/Linux g++ (GCC) 4.8.5 20150623 (Red Hat 4.8.5-39)
|
||||||
|
Power8 (echidna) GNU Fortran (GCC) 4.8.5 20150623 (Red Hat 4.8.5-39)
|
||||||
|
|
||||||
|
Linux 3.10.0-1160.24.1.el7 GNU C (gcc), Fortran (gfortran), C++ (g++)
|
||||||
|
#1 SMP x86_64 GNU/Linux compilers:
|
||||||
|
Centos7 Version 4.8.5 20150623 (Red Hat 4.8.5-4)
|
||||||
|
(jelly/kituo/moohan) Version 4.9.3, Version 5.3.0, Version 6.3.0,
|
||||||
|
Version 7.2.0, Version 8.3.0, Version 9.1.0
|
||||||
|
Intel(R) C (icc), C++ (icpc), Fortran (icc)
|
||||||
|
compilers:
|
||||||
|
Version 17.0.0.098 Build 20160721
|
||||||
|
GNU C (gcc) and C++ (g++) 4.8.5 compilers
|
||||||
|
with NAG Fortran Compiler Release 6.1(Tozai)
|
||||||
|
Intel(R) C (icc) and C++ (icpc) 17.0.0.098 compilers
|
||||||
|
with NAG Fortran Compiler Release 6.1(Tozai)
|
||||||
|
MPICH 3.1.4 compiled with GCC 4.9.3
|
||||||
|
MPICH 3.3 compiled with GCC 7.2.0
|
||||||
|
OpenMPI 2.1.6 compiled with icc 18.0.1
|
||||||
|
OpenMPI 3.1.3 and 4.0.0 compiled with GCC 7.2.0
|
||||||
|
PGI C, Fortran, C++ for 64-bit target on
|
||||||
|
x86_64;
|
||||||
|
Version 19.10-0
|
||||||
|
|
||||||
|
Linux-3.10.0-1127.0.0.1chaos openmpi-4.0.0
|
||||||
|
#1 SMP x86_64 GNU/Linux clang 6.0.0, 11.0.1
|
||||||
|
(quartz) GCC 7.3.0, 8.1.0
|
||||||
|
Intel 16.0.4, 18.0.2, 19.0.4
|
||||||
|
|
||||||
|
macOS Apple M1 11.6 Apple clang version 12.0.5 (clang-1205.0.22.11)
|
||||||
|
Darwin 20.6.0 arm64 gfortran GNU Fortran (Homebrew GCC 11.2.0) 11.1.0
|
||||||
|
(macmini-m1) Intel icc/icpc/ifort version 2021.3.0 202106092021.3.0 20210609
|
||||||
|
|
||||||
|
macOS Big Sur 11.3.1 Apple clang version 12.0.5 (clang-1205.0.22.9)
|
||||||
|
Darwin 20.4.0 x86_64 gfortran GNU Fortran (Homebrew GCC 10.2.0_3) 10.2.0
|
||||||
|
(bigsur-1) Intel icc/icpc/ifort version 2021.2.0 20210228
|
||||||
|
|
||||||
|
macOS High Sierra 10.13.6 Apple LLVM version 10.0.0 (clang-1000.10.44.4)
|
||||||
|
64-bit gfortran GNU Fortran (GCC) 6.3.0
|
||||||
|
(bear) Intel icc/icpc/ifort version 19.0.4.233 20190416
|
||||||
|
|
||||||
|
macOS Sierra 10.12.6 Apple LLVM version 9.0.0 (clang-900.39.2)
|
||||||
|
64-bit gfortran GNU Fortran (GCC) 7.4.0
|
||||||
|
(kite) Intel icc/icpc/ifort version 17.0.2
|
||||||
|
|
||||||
|
Mac OS X El Capitan 10.11.6 Apple clang version 7.3.0 from Xcode 7.3
|
||||||
|
64-bit gfortran GNU Fortran (GCC) 5.2.0
|
||||||
|
(osx1011test) Intel icc/icpc/ifort version 16.0.2
|
||||||
|
|
||||||
|
|
||||||
|
Linux 2.6.32-573.22.1.el6 GNU C (gcc), Fortran (gfortran), C++ (g++)
|
||||||
|
#1 SMP x86_64 GNU/Linux compilers:
|
||||||
|
Centos6 Version 4.4.7 20120313
|
||||||
|
(platypus) Version 4.9.3, 5.3.0, 6.2.0
|
||||||
|
MPICH 3.1.4 compiled with GCC 4.9.3
|
||||||
|
PGI C, Fortran, C++ for 64-bit target on
|
||||||
|
x86_64;
|
||||||
|
Version 19.10-0
|
||||||
|
|
||||||
|
Windows 10 x64 Visual Studio 2015 w/ Intel C/C++/Fortran 18 (cmake)
|
||||||
|
Visual Studio 2017 w/ Intel C/C++/Fortran 19 (cmake)
|
||||||
|
Visual Studio 2019 w/ clang 12.0.0
|
||||||
|
with MSVC-like command-line (C/C++ only - cmake)
|
||||||
|
Visual Studio 2019 w/ Intel Fortran 19 (cmake)
|
||||||
|
Visual Studio 2019 w/ MSMPI 10.1 (C only - cmake)
|
||||||
|
|
||||||
|
|
||||||
|
Known Problems
|
||||||
|
==============
|
||||||
|
Setting a variable-length dataset fill value will leak the memory allocated
|
||||||
|
for the p field of the hvl_t struct. A fix is in progress for this.
|
||||||
|
HDFFV-10840
|
||||||
|
|
||||||
|
CMake files do not behave correctly with paths containing spaces.
|
||||||
|
Do not use spaces in paths because the required escaping for handling spaces
|
||||||
|
results in very complex and fragile build files.
|
||||||
|
ADB - 2019/05/07
|
||||||
|
|
||||||
|
At present, metadata cache images may not be generated by parallel
|
||||||
|
applications. Parallel applications can read files with metadata cache
|
||||||
|
images, but since this is a collective operation, a deadlock is possible
|
||||||
|
if one or more processes do not participate.
|
||||||
|
|
||||||
|
CPP ptable test fails on both VS2017 and VS2019 with Intel compiler, JIRA
|
||||||
|
issue: HDFFV-10628. This test will pass with VS2015 with Intel compiler.
|
||||||
|
|
||||||
|
The subsetting option in ph5diff currently will fail and should be avoided.
|
||||||
|
The subsetting option works correctly in serial h5diff.
|
||||||
|
|
||||||
|
Known problems in previous releases can be found in the HISTORY*.txt files
|
||||||
|
in the HDF5 source. Please report any new problems found to
|
||||||
|
help@hdfgroup.org.
|
||||||
|
|
||||||
|
|
||||||
|
CMake vs. Autotools installations
|
||||||
|
=================================
|
||||||
|
While both build systems produce similar results, there are differences.
|
||||||
|
Each system produces the same set of folders on linux (only CMake works
|
||||||
|
on standard Windows); bin, include, lib and share. Autotools places the
|
||||||
|
COPYING and RELEASE.txt file in the root folder, CMake places them in
|
||||||
|
the share folder.
|
||||||
|
|
||||||
|
The bin folder contains the tools and the build scripts. Additionally, CMake
|
||||||
|
creates dynamic versions of the tools with the suffix "-shared". Autotools
|
||||||
|
installs one set of tools depending on the "--enable-shared" configuration
|
||||||
|
option.
|
||||||
|
build scripts
|
||||||
|
-------------
|
||||||
|
Autotools: h5c++, h5cc, h5fc
|
||||||
|
CMake: h5c++, h5cc, h5hlc++, h5hlcc
|
||||||
|
|
||||||
|
The include folder holds the header files and the fortran mod files. CMake
|
||||||
|
places the fortran mod files into separate shared and static subfolders,
|
||||||
|
while Autotools places one set of mod files into the include folder. Because
|
||||||
|
CMake produces a tools library, the header files for tools will appear in
|
||||||
|
the include folder.
|
||||||
|
|
||||||
|
The lib folder contains the library files, and CMake adds the pkgconfig
|
||||||
|
subfolder with the hdf5*.pc files used by the bin/build scripts created by
|
||||||
|
the CMake build. CMake separates the C interface code from the fortran code by
|
||||||
|
creating C-stub libraries for each Fortran library. In addition, only CMake
|
||||||
|
installs the tools library. The names of the szip libraries are different
|
||||||
|
between the build systems.
|
||||||
|
|
||||||
|
The share folder will have the most differences because CMake builds include
|
||||||
|
a number of CMake specific files for support of CMake's find_package and support
|
||||||
|
for the HDF5 Examples CMake project.
|
||||||
|
|
||||||
|
The issues with the gif tool are:
|
||||||
|
HDFFV-10592 CVE-2018-17433
|
||||||
|
HDFFV-10593 CVE-2018-17436
|
||||||
|
HDFFV-11048 CVE-2020-10809
|
||||||
|
These CVE issues have not yet been addressed and can be avoided by not building
|
||||||
|
the gif tool. Disable building the High-Level tools with these options:
|
||||||
|
autotools: --disable-hltools
|
||||||
|
cmake: HDF5_BUILD_HL_TOOLS=OFF
|
||||||
|
|
@ -0,0 +1,254 @@
|
||||||
|
************************************************************************
|
||||||
|
* Build and Install HDF5 Applications with CMake *
|
||||||
|
************************************************************************
|
||||||
|
|
||||||
|
Notes: This short instruction is written for users who want to quickly
|
||||||
|
build HDF5 applications using the CMake tools. Users can adapt
|
||||||
|
these instructions for their own applications. For more information,
|
||||||
|
see the "Minimum C Project Files for CMake" section.
|
||||||
|
|
||||||
|
More information about using CMake can be found at the KitWare
|
||||||
|
site, www.cmake.org.
|
||||||
|
|
||||||
|
CMake uses the command line; however, the visual CMake tool is
|
||||||
|
available for the configuration step. The steps are similar for
|
||||||
|
all of the operating systems supported by CMake.
|
||||||
|
|
||||||
|
NOTES:
|
||||||
|
1. Using CMake for building and using HDF5 is under active
|
||||||
|
development. While we have attempted to provide error-free
|
||||||
|
files, please understand that development with CMake has not
|
||||||
|
been extensively tested outside of HDF. The CMake specific
|
||||||
|
files may change before the next release.
|
||||||
|
|
||||||
|
2. CMake for HDF5 development should be usable on any system
|
||||||
|
where CMake is supported. Please send us any comments on how
|
||||||
|
CMake support can be improved on any system.
|
||||||
|
|
||||||
|
3. See the appendix at the bottom of this file for an example
|
||||||
|
of using a ctest script for building and testing. See
|
||||||
|
INSTALL_CMake.txt for more information.
|
||||||
|
|
||||||
|
4. See https://cmake.org/cmake/help/latest/command/find_package.html
|
||||||
|
for more information on the CMake "Config Mode Search Procedure".
|
||||||
|
|
||||||
|
|
||||||
|
========================================================================
|
||||||
|
I. Preconditions
|
||||||
|
========================================================================
|
||||||
|
|
||||||
|
1. We suggest you obtain the latest CMake for your platform from the Kitware
|
||||||
|
web site. The HDF5 1.13.x product requires a minimum CMake version
|
||||||
|
of 3.12. If you are using VS2019, the minimum version is 3.15.
|
||||||
|
|
||||||
|
2. You have installed the HDF5 library built with CMake, by executing
|
||||||
|
the HDF Install Utility (the *.msi file in the binary package for
|
||||||
|
Windows or the *.sh on Linux). You can obtain pre-built binaries
|
||||||
|
from The HDF Group's website at www.hdfgroup.org.
|
||||||
|
|
||||||
|
3. Set the HDF5_ROOT CMake variable, -DHDF5_ROOT=<install_path>
|
||||||
|
or environment variable, set(ENV{HDF5_ROOT} "<install_path>")
|
||||||
|
to the installed location of HDF5.
|
||||||
|
On Windows:
|
||||||
|
HDF5_ROOT=C:/Program Files/HDF_Group/HDF5/1.13.x/
|
||||||
|
On unix:
|
||||||
|
HDF5_ROOT=<install root folder>/HDF_Group/HDF5/1.13.x/
|
||||||
|
|
||||||
|
If you are using shared libraries, you may need to add to the path
|
||||||
|
environment variable. Set the path environment variable to the
|
||||||
|
installed location of the library files for HDF5.
|
||||||
|
On Windows (*.dll):
|
||||||
|
PATH=%PATH%;C:/Program Files/HDF_Group/HDF5/1.13.x/bin
|
||||||
|
On unix (*.so):
|
||||||
|
LD_LIBRARY_PATH=$LD_LIBRARY_PATH:<install root folder>/HDF_Group/HDF5/1.13.x/lib
|
||||||
|
|
||||||
|
If you are using filter plugin libraries, you will need to set the
|
||||||
|
HDF5_PLUGIN_PATH environment variable.
|
||||||
|
On Windows:
|
||||||
|
HDF5_PLUGIN_PATH=C:/Program Files/HDF_Group/HDF5/1.13.x/lib/plugin
|
||||||
|
On unix:
|
||||||
|
HDF5_PLUGIN_PATH=<install root folder>/HDF_Group/HDF5/1.13.x/lib/plugin
|
||||||
|
|
||||||
|
(Note there are no quote characters used on Windows and all platforms
|
||||||
|
use forward slashes)
|
||||||
|
|
||||||
|
4. Created separate source and build directories.
|
||||||
|
(CMake commands are executed in the build directory)
|
||||||
|
|
||||||
|
5. Created a CMakeLists.txt file(s) for your source. See Section III
|
||||||
|
below.
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
========================================================================
|
||||||
|
II. Building HDF5 Applications with CMake
|
||||||
|
========================================================================
|
||||||
|
|
||||||
|
Go through these steps to build HDF5 applications with CMake.
|
||||||
|
(The application must support building with CMake.)
|
||||||
|
|
||||||
|
1. Run CMake
|
||||||
|
2. Configure the cache settings
|
||||||
|
3. Build HDF5 Applications
|
||||||
|
4. Test HDF5 Applications
|
||||||
|
|
||||||
|
These steps are described in more detail below.
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
1. Run CMake
|
||||||
|
|
||||||
|
The visual CMake executable is named "cmake-gui.exe" on Windows and should be
|
||||||
|
available in your Start menu. For Linux, UNIX, and Mac users the
|
||||||
|
executable is named "cmake-gui" and can be found where CMake was
|
||||||
|
installed.
|
||||||
|
|
||||||
|
Specify the source and build directories. Make the build and source
|
||||||
|
directories different. For example on Windows, if the source is at
|
||||||
|
c:\MyHDFstuff\hdf5, then use c:\MyHDFstuff\hdf5\build or
|
||||||
|
c:\MyHDFstuff\build\hdf5 for the build directory.
|
||||||
|
|
||||||
|
PREFERRED:
|
||||||
|
Users can perform the configuration step without using the visual
|
||||||
|
cmake-gui program. The following is an example command line
|
||||||
|
configuration step executed within the build directory:
|
||||||
|
|
||||||
|
cmake -G "<generator>" [-D<options>] <sourcepath>
|
||||||
|
|
||||||
|
Where <generator> is
|
||||||
|
* MinGW Makefiles
|
||||||
|
* NMake Makefiles
|
||||||
|
* Unix Makefiles
|
||||||
|
* Visual Studio 14 2015
|
||||||
|
* Visual Studio 14 2015 Win64
|
||||||
|
* Visual Studio 15 2017
|
||||||
|
* Visual Studio 15 2017 Win64
|
||||||
|
* Visual Studio 16 2019
|
||||||
|
* ... in addition VS2019 will need to set the "-A" option,
|
||||||
|
* ... [Win32, x64, ARM, ARM64]
|
||||||
|
|
||||||
|
<options> is:
|
||||||
|
* BUILD_TESTING:BOOL=ON
|
||||||
|
* BUILD_SHARED_LIBS:BOOL=[ON | OFF]
|
||||||
|
|
||||||
|
2. Configure the cache settings
|
||||||
|
|
||||||
|
2.1 Visual CMake users, click the Configure button. If this is the first time you are
|
||||||
|
running cmake-gui in this directory, you will be prompted for the
|
||||||
|
generator you wish to use (for example on Windows, Visual Studio 14 2015 Win64).
|
||||||
|
CMake will read in the CMakeLists.txt files from the source directory and
|
||||||
|
display options for the HDF5 project. After the first configure you
|
||||||
|
can adjust the cache settings and/or specify locations of other programs.
|
||||||
|
|
||||||
|
Any conflicts or new values will be highlighted by the configure
|
||||||
|
process in red. Once you are happy with all the settings and there are no
|
||||||
|
more values in red, click the Generate button to produce the appropriate
|
||||||
|
build files.
|
||||||
|
|
||||||
|
On Windows, if you are using a Visual Studio generator, the solution and
|
||||||
|
project files will be created in the build folder.
|
||||||
|
|
||||||
|
On linux, if you are using the Unix Makefiles generator, the Makefiles will
|
||||||
|
be created in the build folder.
|
||||||
|
|
||||||
|
2.2 Alternative command line example on Windows in c:\MyHDFstuff\hdf5\build directory:
|
||||||
|
|
||||||
|
cmake -G "Visual Studio 14 2015 Win64" -DBUILD_TESTING:BOOL=ON ..
|
||||||
|
|
||||||
|
3. Build HDF5 Applications
|
||||||
|
|
||||||
|
On Windows, you can build HDF5 applications using either the Visual Studio Environment
|
||||||
|
or the command line. The command line is normally used on linux, Unix, and Mac.
|
||||||
|
|
||||||
|
To build from the command line, navigate to your build directory and
|
||||||
|
execute the following:
|
||||||
|
|
||||||
|
cmake --build . --config {Debug | Release}
|
||||||
|
|
||||||
|
NOTE: "--config {Debug | Release}" may be optional on your platform. We
|
||||||
|
recommend choosing either Debug or Release on Windows. If you are
|
||||||
|
using the pre-built binaries from HDF, use Release.
|
||||||
|
|
||||||
|
3.1 If you wish to use the Visual Studio environment, open the solution
|
||||||
|
file in your build directory. Be sure to select either Debug or
|
||||||
|
Release and build the solution.
|
||||||
|
|
||||||
|
4. Test HDF5 Applications
|
||||||
|
|
||||||
|
To test the build, navigate to your build directory and execute:
|
||||||
|
|
||||||
|
ctest . -C {Debug | Release}
|
||||||
|
|
||||||
|
NOTE: "-C {Debug | Release}" may be optional on your platform. We
|
||||||
|
recommend choosing either Debug or Release to match the build
|
||||||
|
step on Windows.
|
||||||
|
|
||||||
|
5. The files that support building with CMake are all of the files in the
|
||||||
|
config/cmake folder, the CMakeLists.txt files in each source folder, and
|
||||||
|
CTestConfig.cmake. CTestConfig.cmake is specific to the internal testing
|
||||||
|
performed by The HDF Group. It should be altered for the user's
|
||||||
|
installation and needs. The cacheinit.cmake file settings are used by
|
||||||
|
The HDF Group for daily testing. It should be altered/ignored for the user's
|
||||||
|
installation and needs.
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
========================================================================
|
||||||
|
III. Minimum C Project Files for CMake
|
||||||
|
========================================================================
|
||||||
|
|
||||||
|
Given the preconditions in section I, create a CMakeLists.txt file at the
|
||||||
|
source root. Include the following text in the file:
|
||||||
|
|
||||||
|
##########################################################
|
||||||
|
cmake_minimum_required (VERSION 3.12)
|
||||||
|
project (HDF5MyApp C CXX)
|
||||||
|
|
||||||
|
set (LIB_TYPE STATIC) # or SHARED
|
||||||
|
string(TOLOWER ${LIB_TYPE} SEARCH_TYPE)
|
||||||
|
|
||||||
|
find_package (HDF5 NAMES hdf5 COMPONENTS C ${SEARCH_TYPE})
|
||||||
|
# find_package (HDF5) # Find non-cmake built HDF5
|
||||||
|
set_directory_properties(PROPERTIES INCLUDE_DIRECTORIES "${HDF5_INCLUDE_DIR}")
|
||||||
|
set (LINK_LIBS ${LINK_LIBS} ${HDF5_C_${LIB_TYPE}_LIBRARY})
|
||||||
|
|
||||||
|
set (example hdf_example)
|
||||||
|
|
||||||
|
add_executable (${example} ${PROJECT_SOURCE_DIR}/${example}.c)
|
||||||
|
TARGET_C_PROPERTIES (${example} PRIVATE ${LIB_TYPE})
|
||||||
|
target_link_libraries (${example} ${LINK_LIBS})
|
||||||
|
|
||||||
|
enable_testing ()
|
||||||
|
include (CTest)
|
||||||
|
|
||||||
|
add_test (NAME test_example COMMAND ${example})
|
||||||
|
##########################################################
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
========================================================================
|
||||||
|
IV. APPENDIX
|
||||||
|
========================================================================
|
||||||
|
|
||||||
|
Below is an example of a ctest script that can be used to build the examples.
|
||||||
|
Adjust the values as necessary. Note that the defaults can be entered on the
|
||||||
|
command line and the build folder is created as a sub-folder. Windows should
|
||||||
|
adjust the forward slash to double backslashes, except for the HDF_DIR
|
||||||
|
environment variable.
|
||||||
|
|
||||||
|
NOTE: this file is available at the HDF web site:
|
||||||
|
https://portal.hdfgroup.org/display/support/Building+HDF5+with+CMake
|
||||||
|
|
||||||
|
HDF5_Examples.cmake
|
||||||
|
HDF5_Examples_options.cmake
|
||||||
|
|
||||||
|
Also available at the HDF web site is a CMake application framework template.
|
||||||
|
You can quickly add files to the framework and execute the script to compile
|
||||||
|
your application with an installed HDF5 binary.
|
||||||
|
|
||||||
|
|
||||||
|
========================================================================
|
||||||
|
For further assistance, send email to help@hdfgroup.org
|
||||||
|
========================================================================
|
||||||
|
|
||||||
|
|
||||||
|
|
@ -0,0 +1,87 @@
|
||||||
|
|
||||||
|
***********************************************************************
|
||||||
|
* HDF5 Build and Install Suggestions for Windows and Visual Studio *
|
||||||
|
* (Full Version) *
|
||||||
|
***********************************************************************
|
||||||
|
|
||||||
|
These suggestions are for Visual Studio users.
|
||||||
|
|
||||||
|
Instructions for building and testing HDF5 applications using CMake can
|
||||||
|
be found in the USING_HDF5_CMake.txt file found in this folder.
|
||||||
|
|
||||||
|
NOTE: Building applications with the dynamic/shared hdf5 libraries requires
|
||||||
|
that the "H5_BUILT_AS_DYNAMIC_LIB" compile definition be used.
|
||||||
|
|
||||||
|
The following two sections are helpful if you do not use CMake to build
|
||||||
|
your applications.
|
||||||
|
|
||||||
|
==============================================================================================
|
||||||
|
Using Visual Studio 2010 and above with HDF5 Libraries built with Visual Studio 2010 and above
|
||||||
|
==============================================================================================
|
||||||
|
|
||||||
|
1. Set up path for external libraries and headers
|
||||||
|
|
||||||
|
The path settings will need to be in the project property sheets per project.
|
||||||
|
Go to "Project" and select "Properties", find "Configuration Properties",
|
||||||
|
and then "VC++ Directories".
|
||||||
|
|
||||||
|
1.1 If you are building on 64-bit Windows, find the "Platform" dropdown
|
||||||
|
and select "x64".
|
||||||
|
|
||||||
|
1.2 Add the header path to the "Include Directories" setting.
|
||||||
|
|
||||||
|
1.3 Add the library path to the "Library Directories" setting.
|
||||||
|
|
||||||
|
1.4 Select Linker->Input and beginning with the
|
||||||
|
"Additional Dependencies" line, enter the library names. The
|
||||||
|
external libraries should be listed first, followed by the HDF5
|
||||||
|
library, and then optionally the HDF5 High Level, Fortran or C++
|
||||||
|
libraries. For example, to compile a C++ application, enter:
|
||||||
|
|
||||||
|
szip.lib zlib.lib hdf5.lib hdf5_cpp.lib
|
||||||
|
|
||||||
|
|
||||||
|
==========================================================================
|
||||||
|
Using Visual Studio 2008 with HDF5 Libraries built with Visual Studio 2008
|
||||||
|
==========================================================================
|
||||||
|
|
||||||
|
2. Set up the path for external libraries and headers
|
||||||
|
|
||||||
|
Invoke Microsoft Visual Studio and go to "Tools" and select "Options",
|
||||||
|
find "Projects", and then "VC++ Directories".
|
||||||
|
|
||||||
|
2.1 If you are building on 64-bit Windows, find the "Platform" dropdown
|
||||||
|
and select "x64".
|
||||||
|
|
||||||
|
2.2 Find the box "Show directories for", choose "Include files", add the
|
||||||
|
header path (i.e. c:\Program Files\HDF_Group\HDF5\1.13.x\include)
|
||||||
|
to the included directories.
|
||||||
|
|
||||||
|
2.3 Find the box "Show directories for", choose "Library files", add the
|
||||||
|
library path (i.e. c:\Program Files\HDF_Group\HDF5\1.13.x\lib)
|
||||||
|
to the library directories.
|
||||||
|
|
||||||
|
2.4 If using Fortran libraries, you will also need to setup the path
|
||||||
|
for the Intel Fortran compiler.
|
||||||
|
|
||||||
|
2.5 Select Project->Properties->Linker->Input and beginning with the
|
||||||
|
"Additional Dependencies" line, enter the library names. The
|
||||||
|
external libraries should be listed first, followed by the HDF5
|
||||||
|
library, and then optionally the HDF5 High Level, Fortran or C++
|
||||||
|
libraries. For example, to compile a C++ application, enter:
|
||||||
|
|
||||||
|
szip.lib zlib.lib hdf5.lib hdf5_cpp.lib
|
||||||
|
|
||||||
|
========================================================================
|
||||||
|
3. Helpful Pointers
|
||||||
|
========================================================================
|
||||||
|
|
||||||
|
3.1 FAQ
|
||||||
|
|
||||||
|
Many other common questions and hints are located online and being updated
|
||||||
|
in the HDF Knowledge Base, please see:
|
||||||
|
|
||||||
|
https://portal.hdfgroup.org/display/knowledge/HDF+Knowledge+Base
|
||||||
|
|
||||||
|
************************************************************************
|
||||||
|
Please send email to help@hdfgroup.org for further assistance.
|
||||||
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|
|
@ -0,0 +1,90 @@
|
||||||
|
# This is a basic version file for the Config-mode of find_package().
|
||||||
|
# It is used by write_basic_package_version_file() as input file for configure_file()
|
||||||
|
# to create a version-file which can be installed along a config.cmake file.
|
||||||
|
#
|
||||||
|
# The created file sets PACKAGE_VERSION_EXACT if the current version string and
|
||||||
|
# the requested version string are exactly the same and it sets
|
||||||
|
# PACKAGE_VERSION_COMPATIBLE if the current version is >= requested version,
|
||||||
|
# but only if the requested major and minor versions are the same as the current
|
||||||
|
# one.
|
||||||
|
# The variable CVF_VERSION must be set before calling configure_file().
|
||||||
|
|
||||||
|
|
||||||
|
set(PACKAGE_VERSION "1.13.1")
|
||||||
|
|
||||||
|
if(PACKAGE_VERSION VERSION_LESS PACKAGE_FIND_VERSION)
|
||||||
|
set(PACKAGE_VERSION_COMPATIBLE FALSE)
|
||||||
|
else()
|
||||||
|
|
||||||
|
if("1.13.1" MATCHES "^([0-9]+)\\.([0-9]+)")
|
||||||
|
set(CVF_VERSION_MAJOR "${CMAKE_MATCH_1}")
|
||||||
|
set(CVF_VERSION_MINOR "${CMAKE_MATCH_2}")
|
||||||
|
|
||||||
|
if(NOT CVF_VERSION_MAJOR VERSION_EQUAL 0)
|
||||||
|
string(REGEX REPLACE "^0+" "" CVF_VERSION_MAJOR "${CVF_VERSION_MAJOR}")
|
||||||
|
endif()
|
||||||
|
if(NOT CVF_VERSION_MINOR VERSION_EQUAL 0)
|
||||||
|
string(REGEX REPLACE "^0+" "" CVF_VERSION_MINOR "${CVF_VERSION_MINOR}")
|
||||||
|
endif()
|
||||||
|
else()
|
||||||
|
set(CVF_VERSION_MAJOR "1.13.1")
|
||||||
|
set(CVF_VERSION_MINOR "")
|
||||||
|
endif()
|
||||||
|
|
||||||
|
if(PACKAGE_FIND_VERSION_RANGE)
|
||||||
|
# both endpoints of the range must have the expected major and minor versions
|
||||||
|
math (EXPR CVF_VERSION_MINOR_NEXT "${CVF_VERSION_MINOR} + 1")
|
||||||
|
if (NOT (PACKAGE_FIND_VERSION_MIN_MAJOR STREQUAL CVF_VERSION_MAJOR
|
||||||
|
AND PACKAGE_FIND_VERSION_MIN_MINOR STREQUAL CVF_VERSION_MINOR)
|
||||||
|
OR ((PACKAGE_FIND_VERSION_RANGE_MAX STREQUAL "INCLUDE"
|
||||||
|
AND NOT (PACKAGE_FIND_VERSION_MAX_MAJOR STREQUAL CVF_VERSION_MAJOR
|
||||||
|
AND PACKAGE_FIND_VERSION_MAX_MINOR STREQUAL CVF_VERSION_MINOR))
|
||||||
|
OR (PACKAGE_FIND_VERSION_RANGE_MAX STREQUAL "EXCLUDE"
|
||||||
|
AND NOT PACKAGE_FIND_VERSION_MAX VERSION_LESS_EQUAL ${CVF_VERSION_MAJOR}.${CVF_VERSION_MINOR_NEXT})))
|
||||||
|
set(PACKAGE_VERSION_COMPATIBLE FALSE)
|
||||||
|
elseif(PACKAGE_FIND_VERSION_MIN_MAJOR STREQUAL CVF_VERSION_MAJOR
|
||||||
|
AND PACKAGE_FIND_VERSION_MIN_MINOR STREQUAL CVF_VERSION_MINOR
|
||||||
|
AND ((PACKAGE_FIND_VERSION_RANGE_MAX STREQUAL "INCLUDE" AND PACKAGE_VERSION VERSION_LESS_EQUAL PACKAGE_FIND_VERSION_MAX)
|
||||||
|
OR (PACKAGE_FIND_VERSION_RANGE_MAX STREQUAL "EXCLUDE" AND PACKAGE_VERSION VERSION_LESS PACKAGE_FIND_VERSION_MAX)))
|
||||||
|
set(PACKAGE_VERSION_COMPATIBLE TRUE)
|
||||||
|
else()
|
||||||
|
set(PACKAGE_VERSION_COMPATIBLE FALSE)
|
||||||
|
endif()
|
||||||
|
else()
|
||||||
|
if(NOT PACKAGE_FIND_VERSION_MAJOR VERSION_EQUAL 0)
|
||||||
|
string(REGEX REPLACE "^0+" "" PACKAGE_FIND_VERSION_MAJOR "${PACKAGE_FIND_VERSION_MAJOR}")
|
||||||
|
endif()
|
||||||
|
if(NOT PACKAGE_FIND_VERSION_MINOR VERSION_EQUAL 0)
|
||||||
|
string(REGEX REPLACE "^0+" "" PACKAGE_FIND_VERSION_MINOR "${PACKAGE_FIND_VERSION_MINOR}")
|
||||||
|
endif()
|
||||||
|
|
||||||
|
if((PACKAGE_FIND_VERSION_MAJOR STREQUAL CVF_VERSION_MAJOR) AND
|
||||||
|
(PACKAGE_FIND_VERSION_MINOR STREQUAL CVF_VERSION_MINOR))
|
||||||
|
set(PACKAGE_VERSION_COMPATIBLE TRUE)
|
||||||
|
else()
|
||||||
|
set(PACKAGE_VERSION_COMPATIBLE FALSE)
|
||||||
|
endif()
|
||||||
|
|
||||||
|
if(PACKAGE_FIND_VERSION STREQUAL PACKAGE_VERSION)
|
||||||
|
set(PACKAGE_VERSION_EXACT TRUE)
|
||||||
|
endif()
|
||||||
|
endif()
|
||||||
|
endif()
|
||||||
|
|
||||||
|
|
||||||
|
# if the installed project requested no architecture check, don't perform the check
|
||||||
|
if("FALSE")
|
||||||
|
return()
|
||||||
|
endif()
|
||||||
|
|
||||||
|
# if the installed or the using project don't have CMAKE_SIZEOF_VOID_P set, ignore it:
|
||||||
|
if("${CMAKE_SIZEOF_VOID_P}" STREQUAL "" OR "8" STREQUAL "")
|
||||||
|
return()
|
||||||
|
endif()
|
||||||
|
|
||||||
|
# check that the installed version has the same 32/64bit-ness as the one which is currently searching:
|
||||||
|
if(NOT CMAKE_SIZEOF_VOID_P STREQUAL "8")
|
||||||
|
math(EXPR installedBits "8 * 8")
|
||||||
|
set(PACKAGE_VERSION "${PACKAGE_VERSION} (${installedBits}bit)")
|
||||||
|
set(PACKAGE_VERSION_UNSUITABLE TRUE)
|
||||||
|
endif()
|
||||||
|
|
@ -0,0 +1,238 @@
|
||||||
|
#
|
||||||
|
# Copyright by The HDF Group.
|
||||||
|
# All rights reserved.
|
||||||
|
#
|
||||||
|
# This file is part of HDF5. The full HDF5 copyright notice, including
|
||||||
|
# terms governing use, modification, and redistribution, is contained in
|
||||||
|
# the COPYING file, which can be found at the root of the source code
|
||||||
|
# distribution tree, or in https://www.hdfgroup.org/licenses.
|
||||||
|
# If you do not have access to either file, you may request a copy from
|
||||||
|
# help@hdfgroup.org.
|
||||||
|
#
|
||||||
|
#-----------------------------------------------------------------------------
|
||||||
|
# HDF5 Config file for compiling against hdf5 build/install directory
|
||||||
|
#-----------------------------------------------------------------------------
|
||||||
|
|
||||||
|
####### Expanded from @PACKAGE_INIT@ by configure_package_config_file() #######
|
||||||
|
####### Any changes to this file will be overwritten by the next CMake run ####
|
||||||
|
####### The input file was hdf5-config.cmake.in ########
|
||||||
|
|
||||||
|
get_filename_component(PACKAGE_PREFIX_DIR "${CMAKE_CURRENT_LIST_DIR}/../" ABSOLUTE)
|
||||||
|
|
||||||
|
macro(set_and_check _var _file)
|
||||||
|
set(${_var} "${_file}")
|
||||||
|
if(NOT EXISTS "${_file}")
|
||||||
|
message(FATAL_ERROR "File or directory ${_file} referenced by variable ${_var} does not exist !")
|
||||||
|
endif()
|
||||||
|
endmacro()
|
||||||
|
|
||||||
|
macro(check_required_components _NAME)
|
||||||
|
foreach(comp ${${_NAME}_FIND_COMPONENTS})
|
||||||
|
if(NOT ${_NAME}_${comp}_FOUND)
|
||||||
|
if(${_NAME}_FIND_REQUIRED_${comp})
|
||||||
|
set(${_NAME}_FOUND FALSE)
|
||||||
|
endif()
|
||||||
|
endif()
|
||||||
|
endforeach()
|
||||||
|
endmacro()
|
||||||
|
|
||||||
|
####################################################################################
|
||||||
|
|
||||||
|
string(TOUPPER hdf5 HDF5_PACKAGE_NAME)
|
||||||
|
|
||||||
|
set (${HDF5_PACKAGE_NAME}_VALID_COMPONENTS
|
||||||
|
static
|
||||||
|
shared
|
||||||
|
C
|
||||||
|
CXX
|
||||||
|
Fortran
|
||||||
|
HL
|
||||||
|
CXX_HL
|
||||||
|
Fortran_HL
|
||||||
|
Java
|
||||||
|
Tools
|
||||||
|
)
|
||||||
|
|
||||||
|
#-----------------------------------------------------------------------------
|
||||||
|
# User Options
|
||||||
|
#-----------------------------------------------------------------------------
|
||||||
|
set (${HDF5_PACKAGE_NAME}_ENABLE_PARALLEL OFF)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_BUILD_FORTRAN OFF)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_BUILD_CPP_LIB ON)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_BUILD_JAVA OFF)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_BUILD_TOOLS ON)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_BUILD_HL_LIB ON)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_BUILD_HL_TOOLS ON)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_ENABLE_THREADSAFE OFF)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_ENABLE_PLUGIN_SUPPORT OFF)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_ENABLE_Z_LIB_SUPPORT OFF)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_ENABLE_SZIP_SUPPORT OFF)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_ENABLE_SZIP_ENCODING )
|
||||||
|
set (${HDF5_PACKAGE_NAME}_BUILD_SHARED_LIBS YES)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_BUILD_STATIC_LIBS YES)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_PACKAGE_EXTLIBS OFF)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_EXPORT_LIBRARIES hdf5-static;hdf5-shared;hdf5_tools-static;hdf5_tools-shared;hdf5_hl-static;hdf5_hl-shared;hdf5_cpp-static;hdf5_cpp-shared;hdf5_hl_cpp-static;hdf5_hl_cpp-shared)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_ARCHITECTURE "")
|
||||||
|
set (${HDF5_PACKAGE_NAME}_TOOLSET "")
|
||||||
|
set (${HDF5_PACKAGE_NAME}_DEFAULT_API_VERSION "v114")
|
||||||
|
set (${HDF5_PACKAGE_NAME}_PARALLEL_FILTERED_WRITES "")
|
||||||
|
|
||||||
|
#-----------------------------------------------------------------------------
|
||||||
|
# Dependencies
|
||||||
|
#-----------------------------------------------------------------------------
|
||||||
|
if (${HDF5_PACKAGE_NAME}_ENABLE_PARALLEL)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_MPI_C_INCLUDE_PATH "")
|
||||||
|
set (${HDF5_PACKAGE_NAME}_MPI_C_LIBRARIES "")
|
||||||
|
if (${HDF5_PACKAGE_NAME}_BUILD_FORTRAN)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_MPI_Fortran_INCLUDE_PATH "")
|
||||||
|
set (${HDF5_PACKAGE_NAME}_MPI_Fortran_LIBRARIES "")
|
||||||
|
endif ()
|
||||||
|
endif ()
|
||||||
|
|
||||||
|
if (${HDF5_PACKAGE_NAME}_BUILD_JAVA)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_JAVA_INCLUDE_DIRS
|
||||||
|
${PACKAGE_PREFIX_DIR}/lib/jarhdf5-1.13.1.jar
|
||||||
|
${PACKAGE_PREFIX_DIR}/lib/slf4j-api-1.7.33.jar
|
||||||
|
${PACKAGE_PREFIX_DIR}/lib/slf4j-nop-1.7.33.jar
|
||||||
|
)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_JAVA_LIBRARY "${PACKAGE_PREFIX_DIR}/lib")
|
||||||
|
set (${HDF5_PACKAGE_NAME}_JAVA_LIBRARIES "${${HDF5_PACKAGE_NAME}_JAVA_LIBRARY}")
|
||||||
|
endif ()
|
||||||
|
|
||||||
|
#-----------------------------------------------------------------------------
|
||||||
|
# Directories
|
||||||
|
#-----------------------------------------------------------------------------
|
||||||
|
set (${HDF5_PACKAGE_NAME}_INCLUDE_DIR "${PACKAGE_PREFIX_DIR}/include" "${${HDF5_PACKAGE_NAME}_MPI_C_INCLUDE_DIRS}")
|
||||||
|
|
||||||
|
set (${HDF5_PACKAGE_NAME}_SHARE_DIR "${PACKAGE_PREFIX_DIR}/cmake")
|
||||||
|
set_and_check (${HDF5_PACKAGE_NAME}_BUILD_DIR "${PACKAGE_PREFIX_DIR}")
|
||||||
|
|
||||||
|
if (${HDF5_PACKAGE_NAME}_BUILD_CPP_LIB)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_INCLUDE_DIR_CPP "${PACKAGE_PREFIX_DIR}/include")
|
||||||
|
endif ()
|
||||||
|
|
||||||
|
if (${HDF5_PACKAGE_NAME}_BUILD_HL_LIB)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_INCLUDE_DIR_HL "${PACKAGE_PREFIX_DIR}/include")
|
||||||
|
endif ()
|
||||||
|
|
||||||
|
if (${HDF5_PACKAGE_NAME}_BUILD_HL_LIB AND ${HDF5_PACKAGE_NAME}_BUILD_CPP_LIB)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_INCLUDE_DIR_HL_CPP "${PACKAGE_PREFIX_DIR}/include")
|
||||||
|
endif ()
|
||||||
|
|
||||||
|
if (${HDF5_PACKAGE_NAME}_BUILD_TOOLS)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_INCLUDE_DIR_TOOLS "${PACKAGE_PREFIX_DIR}/include")
|
||||||
|
set_and_check (${HDF5_PACKAGE_NAME}_TOOLS_DIR "${PACKAGE_PREFIX_DIR}/bin")
|
||||||
|
endif ()
|
||||||
|
|
||||||
|
#-----------------------------------------------------------------------------
|
||||||
|
# Version Strings
|
||||||
|
#-----------------------------------------------------------------------------
|
||||||
|
set (${HDF5_PACKAGE_NAME}_VERSION_STRING 1.13.1)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_VERSION_MAJOR 1.13)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_VERSION_MINOR 1)
|
||||||
|
|
||||||
|
#-----------------------------------------------------------------------------
|
||||||
|
# Don't include targets if this file is being picked up by another
|
||||||
|
# project which has already built hdf5 as a subproject
|
||||||
|
#-----------------------------------------------------------------------------
|
||||||
|
if (NOT TARGET "hdf5")
|
||||||
|
if (${HDF5_PACKAGE_NAME}_ENABLE_Z_LIB_SUPPORT AND ${HDF5_PACKAGE_NAME}_PACKAGE_EXTLIBS)
|
||||||
|
include (${PACKAGE_PREFIX_DIR}/cmake/-targets.cmake)
|
||||||
|
endif ()
|
||||||
|
if (${HDF5_PACKAGE_NAME}_ENABLE_SZIP_SUPPORT AND ${HDF5_PACKAGE_NAME}_PACKAGE_EXTLIBS)
|
||||||
|
include (${PACKAGE_PREFIX_DIR}/cmake/-targets.cmake)
|
||||||
|
endif ()
|
||||||
|
include (${PACKAGE_PREFIX_DIR}/cmake/hdf5-targets.cmake)
|
||||||
|
endif ()
|
||||||
|
|
||||||
|
# Handle default component(static) :
|
||||||
|
if (NOT ${HDF5_PACKAGE_NAME}_FIND_COMPONENTS)
|
||||||
|
if (${HDF5_PACKAGE_NAME}_BUILD_STATIC_LIBS)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_LIB_TYPE)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_FIND_COMPONENTS C HL static)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_FIND_REQUIRED_static_C true)
|
||||||
|
else ()
|
||||||
|
set (${HDF5_PACKAGE_NAME}_LIB_TYPE)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_FIND_COMPONENTS C HL shared)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_FIND_REQUIRED_shared_C true)
|
||||||
|
endif ()
|
||||||
|
endif ()
|
||||||
|
|
||||||
|
# Handle requested components:
|
||||||
|
list (REMOVE_DUPLICATES ${HDF5_PACKAGE_NAME}_FIND_COMPONENTS)
|
||||||
|
foreach (comp IN LISTS ${HDF5_PACKAGE_NAME}_FIND_COMPONENTS)
|
||||||
|
if (comp STREQUAL "shared")
|
||||||
|
list (REMOVE_ITEM ${HDF5_PACKAGE_NAME}_FIND_COMPONENTS ${comp})
|
||||||
|
set (${HDF5_PACKAGE_NAME}_LIB_TYPE ${${HDF5_PACKAGE_NAME}_LIB_TYPE} ${comp})
|
||||||
|
|
||||||
|
if (${HDF5_PACKAGE_NAME}_BUILD_FORTRAN)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_INCLUDE_DIR_FORTRAN "${PACKAGE_PREFIX_DIR}/include/shared")
|
||||||
|
endif ()
|
||||||
|
elseif (comp STREQUAL "static")
|
||||||
|
list (REMOVE_ITEM ${HDF5_PACKAGE_NAME}_FIND_COMPONENTS ${comp})
|
||||||
|
set (${HDF5_PACKAGE_NAME}_LIB_TYPE ${${HDF5_PACKAGE_NAME}_LIB_TYPE} ${comp})
|
||||||
|
|
||||||
|
if (${HDF5_PACKAGE_NAME}_BUILD_FORTRAN)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_INCLUDE_DIR_FORTRAN "${PACKAGE_PREFIX_DIR}/include/static")
|
||||||
|
endif ()
|
||||||
|
endif ()
|
||||||
|
endforeach ()
|
||||||
|
foreach (libtype IN LISTS ${HDF5_PACKAGE_NAME}_LIB_TYPE)
|
||||||
|
foreach (comp IN LISTS ${HDF5_PACKAGE_NAME}_FIND_COMPONENTS)
|
||||||
|
set (hdf5_comp2)
|
||||||
|
if (comp STREQUAL "C")
|
||||||
|
set (hdf5_comp "hdf5")
|
||||||
|
elseif (comp STREQUAL "CXX")
|
||||||
|
set (hdf5_comp "hdf5_cpp")
|
||||||
|
elseif (comp STREQUAL "HL")
|
||||||
|
set (hdf5_comp "hdf5_hl")
|
||||||
|
elseif (comp STREQUAL "CXX_HL")
|
||||||
|
set (hdf5_comp "hdf5_hl_cpp")
|
||||||
|
elseif (comp STREQUAL "Java")
|
||||||
|
set (hdf5_comp "hdf5_java")
|
||||||
|
elseif (comp STREQUAL "Tools")
|
||||||
|
set (hdf5_comp "hdf5_tools")
|
||||||
|
elseif (comp STREQUAL "Fortran")
|
||||||
|
set (hdf5_comp2 "hdf5_f90cstub")
|
||||||
|
set (hdf5_comp "hdf5_fortran")
|
||||||
|
elseif (comp STREQUAL "Fortran_HL")
|
||||||
|
set (hdf5_comp2 "hdf5_hl_f90cstub")
|
||||||
|
set (hdf5_comp "hdf5_hl_fortran")
|
||||||
|
endif ()
|
||||||
|
if (comp STREQUAL "Java")
|
||||||
|
list (FIND ${HDF5_PACKAGE_NAME}_EXPORT_LIBRARIES "${hdf5_comp}" HAVE_COMP)
|
||||||
|
else ()
|
||||||
|
list (FIND ${HDF5_PACKAGE_NAME}_EXPORT_LIBRARIES "${hdf5_comp}-${libtype}" HAVE_COMP)
|
||||||
|
endif ()
|
||||||
|
if (${HAVE_COMP} LESS 0)
|
||||||
|
if (comp STREQUAL "Java")
|
||||||
|
set (${HDF5_PACKAGE_NAME}_${comp}_FOUND 0)
|
||||||
|
else ()
|
||||||
|
set (${HDF5_PACKAGE_NAME}_${libtype}_${comp}_FOUND 0)
|
||||||
|
endif ()
|
||||||
|
else ()
|
||||||
|
if (hdf5_comp2)
|
||||||
|
list (FIND ${HDF5_PACKAGE_NAME}_EXPORT_LIBRARIES "${hdf5_comp2}-${libtype}" HAVE_COMP2)
|
||||||
|
if (${HAVE_COMP2} LESS 0)
|
||||||
|
set (${HDF5_PACKAGE_NAME}_${libtype}_${comp}_FOUND 0)
|
||||||
|
else ()
|
||||||
|
set (${HDF5_PACKAGE_NAME}_${libtype}_${comp}_FOUND 1)
|
||||||
|
string(TOUPPER ${HDF5_PACKAGE_NAME}_${comp}_${libtype}_LIBRARY COMP_LIBRARY)
|
||||||
|
set (${COMP_LIBRARY} ${${COMP_LIBRARY}} ${hdf5_comp2}-${libtype} ${hdf5_comp}-${libtype})
|
||||||
|
endif ()
|
||||||
|
elseif (comp STREQUAL "Java")
|
||||||
|
set (${HDF5_PACKAGE_NAME}_${comp}_FOUND 1)
|
||||||
|
string(TOUPPER ${HDF5_PACKAGE_NAME}_${comp}_LIBRARY COMP_LIBRARY)
|
||||||
|
set (${COMP_LIBRARY} ${${COMP_LIBRARY}} ${hdf5_comp})
|
||||||
|
else ()
|
||||||
|
set (${HDF5_PACKAGE_NAME}_${libtype}_${comp}_FOUND 1)
|
||||||
|
string(TOUPPER ${HDF5_PACKAGE_NAME}_${comp}_${libtype}_LIBRARY COMP_LIBRARY)
|
||||||
|
set (${COMP_LIBRARY} ${${COMP_LIBRARY}} ${hdf5_comp}-${libtype})
|
||||||
|
endif ()
|
||||||
|
endif ()
|
||||||
|
endforeach ()
|
||||||
|
endforeach ()
|
||||||
|
|
||||||
|
foreach (libtype IN LISTS ${HDF5_PACKAGE_NAME}_LIB_TYPE)
|
||||||
|
check_required_components(${HDF5_PACKAGE_NAME}_${libtype})
|
||||||
|
endforeach ()
|
||||||
|
|
@ -0,0 +1,460 @@
|
||||||
|
#----------------------------------------------------------------
|
||||||
|
# Generated CMake target import file for configuration "Release".
|
||||||
|
#----------------------------------------------------------------
|
||||||
|
|
||||||
|
# Commands may need to know the format version.
|
||||||
|
set(CMAKE_IMPORT_FILE_VERSION 1)
|
||||||
|
|
||||||
|
# Import target "hdf5-static" for configuration "Release"
|
||||||
|
set_property(TARGET hdf5-static APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(hdf5-static PROPERTIES
|
||||||
|
IMPORTED_LINK_INTERFACE_LANGUAGES_RELEASE "C"
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/lib/libhdf5.lib"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS hdf5-static )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_hdf5-static "${_IMPORT_PREFIX}/lib/libhdf5.lib" )
|
||||||
|
|
||||||
|
# Import target "hdf5-shared" for configuration "Release"
|
||||||
|
set_property(TARGET hdf5-shared APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(hdf5-shared PROPERTIES
|
||||||
|
IMPORTED_IMPLIB_RELEASE "${_IMPORT_PREFIX}/lib/hdf5.lib"
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/hdf5.dll"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS hdf5-shared )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_hdf5-shared "${_IMPORT_PREFIX}/lib/hdf5.lib" "${_IMPORT_PREFIX}/bin/hdf5.dll" )
|
||||||
|
|
||||||
|
# Import target "mirror_server" for configuration "Release"
|
||||||
|
set_property(TARGET mirror_server APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(mirror_server PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/mirror_server.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS mirror_server )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_mirror_server "${_IMPORT_PREFIX}/bin/mirror_server.exe" )
|
||||||
|
|
||||||
|
# Import target "mirror_server_stop" for configuration "Release"
|
||||||
|
set_property(TARGET mirror_server_stop APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(mirror_server_stop PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/mirror_server_stop.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS mirror_server_stop )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_mirror_server_stop "${_IMPORT_PREFIX}/bin/mirror_server_stop.exe" )
|
||||||
|
|
||||||
|
# Import target "hdf5_tools-static" for configuration "Release"
|
||||||
|
set_property(TARGET hdf5_tools-static APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(hdf5_tools-static PROPERTIES
|
||||||
|
IMPORTED_LINK_INTERFACE_LANGUAGES_RELEASE "C"
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/lib/libhdf5_tools.lib"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS hdf5_tools-static )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_hdf5_tools-static "${_IMPORT_PREFIX}/lib/libhdf5_tools.lib" )
|
||||||
|
|
||||||
|
# Import target "hdf5_tools-shared" for configuration "Release"
|
||||||
|
set_property(TARGET hdf5_tools-shared APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(hdf5_tools-shared PROPERTIES
|
||||||
|
IMPORTED_IMPLIB_RELEASE "${_IMPORT_PREFIX}/lib/hdf5_tools.lib"
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/hdf5_tools.dll"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS hdf5_tools-shared )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_hdf5_tools-shared "${_IMPORT_PREFIX}/lib/hdf5_tools.lib" "${_IMPORT_PREFIX}/bin/hdf5_tools.dll" )
|
||||||
|
|
||||||
|
# Import target "h5diff" for configuration "Release"
|
||||||
|
set_property(TARGET h5diff APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5diff PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5diff.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5diff )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5diff "${_IMPORT_PREFIX}/bin/h5diff.exe" )
|
||||||
|
|
||||||
|
# Import target "h5diff-shared" for configuration "Release"
|
||||||
|
set_property(TARGET h5diff-shared APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5diff-shared PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5diff-shared.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5diff-shared )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5diff-shared "${_IMPORT_PREFIX}/bin/h5diff-shared.exe" )
|
||||||
|
|
||||||
|
# Import target "h5ls" for configuration "Release"
|
||||||
|
set_property(TARGET h5ls APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5ls PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5ls.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5ls )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5ls "${_IMPORT_PREFIX}/bin/h5ls.exe" )
|
||||||
|
|
||||||
|
# Import target "h5ls-shared" for configuration "Release"
|
||||||
|
set_property(TARGET h5ls-shared APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5ls-shared PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5ls-shared.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5ls-shared )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5ls-shared "${_IMPORT_PREFIX}/bin/h5ls-shared.exe" )
|
||||||
|
|
||||||
|
# Import target "h5debug" for configuration "Release"
|
||||||
|
set_property(TARGET h5debug APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5debug PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5debug.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5debug )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5debug "${_IMPORT_PREFIX}/bin/h5debug.exe" )
|
||||||
|
|
||||||
|
# Import target "h5repart" for configuration "Release"
|
||||||
|
set_property(TARGET h5repart APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5repart PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5repart.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5repart )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5repart "${_IMPORT_PREFIX}/bin/h5repart.exe" )
|
||||||
|
|
||||||
|
# Import target "h5mkgrp" for configuration "Release"
|
||||||
|
set_property(TARGET h5mkgrp APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5mkgrp PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5mkgrp.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5mkgrp )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5mkgrp "${_IMPORT_PREFIX}/bin/h5mkgrp.exe" )
|
||||||
|
|
||||||
|
# Import target "h5clear" for configuration "Release"
|
||||||
|
set_property(TARGET h5clear APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5clear PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5clear.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5clear )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5clear "${_IMPORT_PREFIX}/bin/h5clear.exe" )
|
||||||
|
|
||||||
|
# Import target "h5delete" for configuration "Release"
|
||||||
|
set_property(TARGET h5delete APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5delete PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5delete.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5delete )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5delete "${_IMPORT_PREFIX}/bin/h5delete.exe" )
|
||||||
|
|
||||||
|
# Import target "h5debug-shared" for configuration "Release"
|
||||||
|
set_property(TARGET h5debug-shared APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5debug-shared PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5debug-shared.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5debug-shared )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5debug-shared "${_IMPORT_PREFIX}/bin/h5debug-shared.exe" )
|
||||||
|
|
||||||
|
# Import target "h5repart-shared" for configuration "Release"
|
||||||
|
set_property(TARGET h5repart-shared APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5repart-shared PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5repart-shared.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5repart-shared )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5repart-shared "${_IMPORT_PREFIX}/bin/h5repart-shared.exe" )
|
||||||
|
|
||||||
|
# Import target "h5mkgrp-shared" for configuration "Release"
|
||||||
|
set_property(TARGET h5mkgrp-shared APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5mkgrp-shared PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5mkgrp-shared.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5mkgrp-shared )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5mkgrp-shared "${_IMPORT_PREFIX}/bin/h5mkgrp-shared.exe" )
|
||||||
|
|
||||||
|
# Import target "h5clear-shared" for configuration "Release"
|
||||||
|
set_property(TARGET h5clear-shared APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5clear-shared PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5clear-shared.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5clear-shared )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5clear-shared "${_IMPORT_PREFIX}/bin/h5clear-shared.exe" )
|
||||||
|
|
||||||
|
# Import target "h5delete-shared" for configuration "Release"
|
||||||
|
set_property(TARGET h5delete-shared APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5delete-shared PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5delete-shared.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5delete-shared )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5delete-shared "${_IMPORT_PREFIX}/bin/h5delete-shared.exe" )
|
||||||
|
|
||||||
|
# Import target "h5import" for configuration "Release"
|
||||||
|
set_property(TARGET h5import APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5import PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5import.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5import )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5import "${_IMPORT_PREFIX}/bin/h5import.exe" )
|
||||||
|
|
||||||
|
# Import target "h5import-shared" for configuration "Release"
|
||||||
|
set_property(TARGET h5import-shared APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5import-shared PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5import-shared.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5import-shared )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5import-shared "${_IMPORT_PREFIX}/bin/h5import-shared.exe" )
|
||||||
|
|
||||||
|
# Import target "h5repack" for configuration "Release"
|
||||||
|
set_property(TARGET h5repack APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5repack PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5repack.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5repack )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5repack "${_IMPORT_PREFIX}/bin/h5repack.exe" )
|
||||||
|
|
||||||
|
# Import target "h5repack-shared" for configuration "Release"
|
||||||
|
set_property(TARGET h5repack-shared APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5repack-shared PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5repack-shared.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5repack-shared )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5repack-shared "${_IMPORT_PREFIX}/bin/h5repack-shared.exe" )
|
||||||
|
|
||||||
|
# Import target "h5jam" for configuration "Release"
|
||||||
|
set_property(TARGET h5jam APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5jam PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5jam.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5jam )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5jam "${_IMPORT_PREFIX}/bin/h5jam.exe" )
|
||||||
|
|
||||||
|
# Import target "h5unjam" for configuration "Release"
|
||||||
|
set_property(TARGET h5unjam APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5unjam PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5unjam.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5unjam )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5unjam "${_IMPORT_PREFIX}/bin/h5unjam.exe" )
|
||||||
|
|
||||||
|
# Import target "h5jam-shared" for configuration "Release"
|
||||||
|
set_property(TARGET h5jam-shared APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5jam-shared PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5jam-shared.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5jam-shared )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5jam-shared "${_IMPORT_PREFIX}/bin/h5jam-shared.exe" )
|
||||||
|
|
||||||
|
# Import target "h5unjam-shared" for configuration "Release"
|
||||||
|
set_property(TARGET h5unjam-shared APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5unjam-shared PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5unjam-shared.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5unjam-shared )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5unjam-shared "${_IMPORT_PREFIX}/bin/h5unjam-shared.exe" )
|
||||||
|
|
||||||
|
# Import target "h5copy" for configuration "Release"
|
||||||
|
set_property(TARGET h5copy APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5copy PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5copy.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5copy )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5copy "${_IMPORT_PREFIX}/bin/h5copy.exe" )
|
||||||
|
|
||||||
|
# Import target "h5copy-shared" for configuration "Release"
|
||||||
|
set_property(TARGET h5copy-shared APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5copy-shared PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5copy-shared.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5copy-shared )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5copy-shared "${_IMPORT_PREFIX}/bin/h5copy-shared.exe" )
|
||||||
|
|
||||||
|
# Import target "h5stat" for configuration "Release"
|
||||||
|
set_property(TARGET h5stat APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5stat PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5stat.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5stat )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5stat "${_IMPORT_PREFIX}/bin/h5stat.exe" )
|
||||||
|
|
||||||
|
# Import target "h5stat-shared" for configuration "Release"
|
||||||
|
set_property(TARGET h5stat-shared APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5stat-shared PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5stat-shared.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5stat-shared )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5stat-shared "${_IMPORT_PREFIX}/bin/h5stat-shared.exe" )
|
||||||
|
|
||||||
|
# Import target "h5dump" for configuration "Release"
|
||||||
|
set_property(TARGET h5dump APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5dump PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5dump.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5dump )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5dump "${_IMPORT_PREFIX}/bin/h5dump.exe" )
|
||||||
|
|
||||||
|
# Import target "h5dump-shared" for configuration "Release"
|
||||||
|
set_property(TARGET h5dump-shared APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5dump-shared PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5dump-shared.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5dump-shared )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5dump-shared "${_IMPORT_PREFIX}/bin/h5dump-shared.exe" )
|
||||||
|
|
||||||
|
# Import target "h5format_convert" for configuration "Release"
|
||||||
|
set_property(TARGET h5format_convert APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5format_convert PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5format_convert.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5format_convert )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5format_convert "${_IMPORT_PREFIX}/bin/h5format_convert.exe" )
|
||||||
|
|
||||||
|
# Import target "h5format_convert-shared" for configuration "Release"
|
||||||
|
set_property(TARGET h5format_convert-shared APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5format_convert-shared PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5format_convert-shared.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5format_convert-shared )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5format_convert-shared "${_IMPORT_PREFIX}/bin/h5format_convert-shared.exe" )
|
||||||
|
|
||||||
|
# Import target "h5perf_serial" for configuration "Release"
|
||||||
|
set_property(TARGET h5perf_serial APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5perf_serial PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5perf_serial.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5perf_serial )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5perf_serial "${_IMPORT_PREFIX}/bin/h5perf_serial.exe" )
|
||||||
|
|
||||||
|
# Import target "hdf5_hl-static" for configuration "Release"
|
||||||
|
set_property(TARGET hdf5_hl-static APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(hdf5_hl-static PROPERTIES
|
||||||
|
IMPORTED_LINK_INTERFACE_LANGUAGES_RELEASE "C"
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/lib/libhdf5_hl.lib"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS hdf5_hl-static )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_hdf5_hl-static "${_IMPORT_PREFIX}/lib/libhdf5_hl.lib" )
|
||||||
|
|
||||||
|
# Import target "hdf5_hl-shared" for configuration "Release"
|
||||||
|
set_property(TARGET hdf5_hl-shared APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(hdf5_hl-shared PROPERTIES
|
||||||
|
IMPORTED_IMPLIB_RELEASE "${_IMPORT_PREFIX}/lib/hdf5_hl.lib"
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/hdf5_hl.dll"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS hdf5_hl-shared )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_hdf5_hl-shared "${_IMPORT_PREFIX}/lib/hdf5_hl.lib" "${_IMPORT_PREFIX}/bin/hdf5_hl.dll" )
|
||||||
|
|
||||||
|
# Import target "gif2h5" for configuration "Release"
|
||||||
|
set_property(TARGET gif2h5 APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(gif2h5 PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/gif2h5.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS gif2h5 )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_gif2h5 "${_IMPORT_PREFIX}/bin/gif2h5.exe" )
|
||||||
|
|
||||||
|
# Import target "gif2h5-shared" for configuration "Release"
|
||||||
|
set_property(TARGET gif2h5-shared APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(gif2h5-shared PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/gif2h5-shared.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS gif2h5-shared )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_gif2h5-shared "${_IMPORT_PREFIX}/bin/gif2h5-shared.exe" )
|
||||||
|
|
||||||
|
# Import target "h52gif" for configuration "Release"
|
||||||
|
set_property(TARGET h52gif APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h52gif PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h52gif.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h52gif )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h52gif "${_IMPORT_PREFIX}/bin/h52gif.exe" )
|
||||||
|
|
||||||
|
# Import target "h52gif-shared" for configuration "Release"
|
||||||
|
set_property(TARGET h52gif-shared APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h52gif-shared PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h52gif-shared.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h52gif-shared )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h52gif-shared "${_IMPORT_PREFIX}/bin/h52gif-shared.exe" )
|
||||||
|
|
||||||
|
# Import target "h5watch" for configuration "Release"
|
||||||
|
set_property(TARGET h5watch APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5watch PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5watch.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5watch )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5watch "${_IMPORT_PREFIX}/bin/h5watch.exe" )
|
||||||
|
|
||||||
|
# Import target "h5watch-shared" for configuration "Release"
|
||||||
|
set_property(TARGET h5watch-shared APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(h5watch-shared PROPERTIES
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/h5watch-shared.exe"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS h5watch-shared )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_h5watch-shared "${_IMPORT_PREFIX}/bin/h5watch-shared.exe" )
|
||||||
|
|
||||||
|
# Import target "hdf5_cpp-static" for configuration "Release"
|
||||||
|
set_property(TARGET hdf5_cpp-static APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(hdf5_cpp-static PROPERTIES
|
||||||
|
IMPORTED_LINK_INTERFACE_LANGUAGES_RELEASE "CXX"
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/lib/libhdf5_cpp.lib"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS hdf5_cpp-static )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_hdf5_cpp-static "${_IMPORT_PREFIX}/lib/libhdf5_cpp.lib" )
|
||||||
|
|
||||||
|
# Import target "hdf5_cpp-shared" for configuration "Release"
|
||||||
|
set_property(TARGET hdf5_cpp-shared APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(hdf5_cpp-shared PROPERTIES
|
||||||
|
IMPORTED_IMPLIB_RELEASE "${_IMPORT_PREFIX}/lib/hdf5_cpp.lib"
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/hdf5_cpp.dll"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS hdf5_cpp-shared )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_hdf5_cpp-shared "${_IMPORT_PREFIX}/lib/hdf5_cpp.lib" "${_IMPORT_PREFIX}/bin/hdf5_cpp.dll" )
|
||||||
|
|
||||||
|
# Import target "hdf5_hl_cpp-static" for configuration "Release"
|
||||||
|
set_property(TARGET hdf5_hl_cpp-static APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(hdf5_hl_cpp-static PROPERTIES
|
||||||
|
IMPORTED_LINK_INTERFACE_LANGUAGES_RELEASE "CXX"
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/lib/libhdf5_hl_cpp.lib"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS hdf5_hl_cpp-static )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_hdf5_hl_cpp-static "${_IMPORT_PREFIX}/lib/libhdf5_hl_cpp.lib" )
|
||||||
|
|
||||||
|
# Import target "hdf5_hl_cpp-shared" for configuration "Release"
|
||||||
|
set_property(TARGET hdf5_hl_cpp-shared APPEND PROPERTY IMPORTED_CONFIGURATIONS RELEASE)
|
||||||
|
set_target_properties(hdf5_hl_cpp-shared PROPERTIES
|
||||||
|
IMPORTED_IMPLIB_RELEASE "${_IMPORT_PREFIX}/lib/hdf5_hl_cpp.lib"
|
||||||
|
IMPORTED_LOCATION_RELEASE "${_IMPORT_PREFIX}/bin/hdf5_hl_cpp.dll"
|
||||||
|
)
|
||||||
|
|
||||||
|
list(APPEND _IMPORT_CHECK_TARGETS hdf5_hl_cpp-shared )
|
||||||
|
list(APPEND _IMPORT_CHECK_FILES_FOR_hdf5_hl_cpp-shared "${_IMPORT_PREFIX}/lib/hdf5_hl_cpp.lib" "${_IMPORT_PREFIX}/bin/hdf5_hl_cpp.dll" )
|
||||||
|
|
||||||
|
# Commands beyond this point should not need to know the version.
|
||||||
|
set(CMAKE_IMPORT_FILE_VERSION)
|
||||||
|
|
@ -0,0 +1,291 @@
|
||||||
|
# Generated by CMake
|
||||||
|
|
||||||
|
if("${CMAKE_MAJOR_VERSION}.${CMAKE_MINOR_VERSION}" LESS 2.6)
|
||||||
|
message(FATAL_ERROR "CMake >= 2.6.0 required")
|
||||||
|
endif()
|
||||||
|
cmake_policy(PUSH)
|
||||||
|
cmake_policy(VERSION 2.6...3.21)
|
||||||
|
#----------------------------------------------------------------
|
||||||
|
# Generated CMake target import file.
|
||||||
|
#----------------------------------------------------------------
|
||||||
|
|
||||||
|
# Commands may need to know the format version.
|
||||||
|
set(CMAKE_IMPORT_FILE_VERSION 1)
|
||||||
|
|
||||||
|
# Protect against multiple inclusion, which would fail when already imported targets are added once more.
|
||||||
|
set(_targetsDefined)
|
||||||
|
set(_targetsNotDefined)
|
||||||
|
set(_expectedTargets)
|
||||||
|
foreach(_expectedTarget hdf5-static hdf5-shared mirror_server mirror_server_stop hdf5_tools-static hdf5_tools-shared h5diff h5diff-shared h5ls h5ls-shared h5debug h5repart h5mkgrp h5clear h5delete h5debug-shared h5repart-shared h5mkgrp-shared h5clear-shared h5delete-shared h5import h5import-shared h5repack h5repack-shared h5jam h5unjam h5jam-shared h5unjam-shared h5copy h5copy-shared h5stat h5stat-shared h5dump h5dump-shared h5format_convert h5format_convert-shared h5perf_serial hdf5_hl-static hdf5_hl-shared gif2h5 gif2h5-shared h52gif h52gif-shared h5watch h5watch-shared hdf5_cpp-static hdf5_cpp-shared hdf5_hl_cpp-static hdf5_hl_cpp-shared)
|
||||||
|
list(APPEND _expectedTargets ${_expectedTarget})
|
||||||
|
if(NOT TARGET ${_expectedTarget})
|
||||||
|
list(APPEND _targetsNotDefined ${_expectedTarget})
|
||||||
|
endif()
|
||||||
|
if(TARGET ${_expectedTarget})
|
||||||
|
list(APPEND _targetsDefined ${_expectedTarget})
|
||||||
|
endif()
|
||||||
|
endforeach()
|
||||||
|
if("${_targetsDefined}" STREQUAL "${_expectedTargets}")
|
||||||
|
unset(_targetsDefined)
|
||||||
|
unset(_targetsNotDefined)
|
||||||
|
unset(_expectedTargets)
|
||||||
|
set(CMAKE_IMPORT_FILE_VERSION)
|
||||||
|
cmake_policy(POP)
|
||||||
|
return()
|
||||||
|
endif()
|
||||||
|
if(NOT "${_targetsDefined}" STREQUAL "")
|
||||||
|
message(FATAL_ERROR "Some (but not all) targets in this export set were already defined.\nTargets Defined: ${_targetsDefined}\nTargets not yet defined: ${_targetsNotDefined}\n")
|
||||||
|
endif()
|
||||||
|
unset(_targetsDefined)
|
||||||
|
unset(_targetsNotDefined)
|
||||||
|
unset(_expectedTargets)
|
||||||
|
|
||||||
|
|
||||||
|
# Compute the installation prefix relative to this file.
|
||||||
|
get_filename_component(_IMPORT_PREFIX "${CMAKE_CURRENT_LIST_FILE}" PATH)
|
||||||
|
get_filename_component(_IMPORT_PREFIX "${_IMPORT_PREFIX}" PATH)
|
||||||
|
if(_IMPORT_PREFIX STREQUAL "/")
|
||||||
|
set(_IMPORT_PREFIX "")
|
||||||
|
endif()
|
||||||
|
|
||||||
|
# Create imported target hdf5-static
|
||||||
|
add_library(hdf5-static STATIC IMPORTED)
|
||||||
|
|
||||||
|
set_target_properties(hdf5-static PROPERTIES
|
||||||
|
INTERFACE_INCLUDE_DIRECTORIES "${_IMPORT_PREFIX}/include;${_IMPORT_PREFIX}/include"
|
||||||
|
INTERFACE_LINK_LIBRARIES "\$<LINK_ONLY:\$<\$<BOOL:OFF>:>>;\$<\$<NOT:\$<PLATFORM_ID:Windows>>:>"
|
||||||
|
)
|
||||||
|
|
||||||
|
# Create imported target hdf5-shared
|
||||||
|
add_library(hdf5-shared SHARED IMPORTED)
|
||||||
|
|
||||||
|
set_target_properties(hdf5-shared PROPERTIES
|
||||||
|
INTERFACE_COMPILE_DEFINITIONS "H5_BUILT_AS_DYNAMIC_LIB"
|
||||||
|
INTERFACE_INCLUDE_DIRECTORIES "\$<\$<BOOL:OFF>:>;${_IMPORT_PREFIX}/include;${_IMPORT_PREFIX}/include"
|
||||||
|
INTERFACE_LINK_LIBRARIES "\$<\$<NOT:\$<PLATFORM_ID:Windows>>:>"
|
||||||
|
)
|
||||||
|
|
||||||
|
# Create imported target mirror_server
|
||||||
|
add_executable(mirror_server IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target mirror_server_stop
|
||||||
|
add_executable(mirror_server_stop IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target hdf5_tools-static
|
||||||
|
add_library(hdf5_tools-static STATIC IMPORTED)
|
||||||
|
|
||||||
|
set_target_properties(hdf5_tools-static PROPERTIES
|
||||||
|
INTERFACE_INCLUDE_DIRECTORIES "${_IMPORT_PREFIX}/include;${_IMPORT_PREFIX}/include"
|
||||||
|
INTERFACE_LINK_LIBRARIES "hdf5-static;\$<LINK_ONLY:\$<\$<BOOL:OFF>:>>"
|
||||||
|
)
|
||||||
|
|
||||||
|
# Create imported target hdf5_tools-shared
|
||||||
|
add_library(hdf5_tools-shared SHARED IMPORTED)
|
||||||
|
|
||||||
|
set_target_properties(hdf5_tools-shared PROPERTIES
|
||||||
|
INTERFACE_COMPILE_DEFINITIONS "H5_BUILT_AS_DYNAMIC_LIB"
|
||||||
|
INTERFACE_INCLUDE_DIRECTORIES "${_IMPORT_PREFIX}/include;${_IMPORT_PREFIX}/include"
|
||||||
|
INTERFACE_LINK_LIBRARIES "hdf5-shared"
|
||||||
|
)
|
||||||
|
|
||||||
|
# Create imported target h5diff
|
||||||
|
add_executable(h5diff IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5diff-shared
|
||||||
|
add_executable(h5diff-shared IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5ls
|
||||||
|
add_executable(h5ls IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5ls-shared
|
||||||
|
add_executable(h5ls-shared IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5debug
|
||||||
|
add_executable(h5debug IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5repart
|
||||||
|
add_executable(h5repart IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5mkgrp
|
||||||
|
add_executable(h5mkgrp IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5clear
|
||||||
|
add_executable(h5clear IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5delete
|
||||||
|
add_executable(h5delete IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5debug-shared
|
||||||
|
add_executable(h5debug-shared IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5repart-shared
|
||||||
|
add_executable(h5repart-shared IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5mkgrp-shared
|
||||||
|
add_executable(h5mkgrp-shared IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5clear-shared
|
||||||
|
add_executable(h5clear-shared IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5delete-shared
|
||||||
|
add_executable(h5delete-shared IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5import
|
||||||
|
add_executable(h5import IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5import-shared
|
||||||
|
add_executable(h5import-shared IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5repack
|
||||||
|
add_executable(h5repack IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5repack-shared
|
||||||
|
add_executable(h5repack-shared IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5jam
|
||||||
|
add_executable(h5jam IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5unjam
|
||||||
|
add_executable(h5unjam IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5jam-shared
|
||||||
|
add_executable(h5jam-shared IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5unjam-shared
|
||||||
|
add_executable(h5unjam-shared IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5copy
|
||||||
|
add_executable(h5copy IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5copy-shared
|
||||||
|
add_executable(h5copy-shared IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5stat
|
||||||
|
add_executable(h5stat IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5stat-shared
|
||||||
|
add_executable(h5stat-shared IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5dump
|
||||||
|
add_executable(h5dump IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5dump-shared
|
||||||
|
add_executable(h5dump-shared IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5format_convert
|
||||||
|
add_executable(h5format_convert IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5format_convert-shared
|
||||||
|
add_executable(h5format_convert-shared IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5perf_serial
|
||||||
|
add_executable(h5perf_serial IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target hdf5_hl-static
|
||||||
|
add_library(hdf5_hl-static STATIC IMPORTED)
|
||||||
|
|
||||||
|
set_target_properties(hdf5_hl-static PROPERTIES
|
||||||
|
INTERFACE_INCLUDE_DIRECTORIES "${_IMPORT_PREFIX}/include;${_IMPORT_PREFIX}/include"
|
||||||
|
INTERFACE_LINK_LIBRARIES "hdf5-static"
|
||||||
|
)
|
||||||
|
|
||||||
|
# Create imported target hdf5_hl-shared
|
||||||
|
add_library(hdf5_hl-shared SHARED IMPORTED)
|
||||||
|
|
||||||
|
set_target_properties(hdf5_hl-shared PROPERTIES
|
||||||
|
INTERFACE_COMPILE_DEFINITIONS "H5_BUILT_AS_DYNAMIC_LIB"
|
||||||
|
INTERFACE_INCLUDE_DIRECTORIES "${_IMPORT_PREFIX}/include;${_IMPORT_PREFIX}/include"
|
||||||
|
INTERFACE_LINK_LIBRARIES "hdf5-shared"
|
||||||
|
)
|
||||||
|
|
||||||
|
# Create imported target gif2h5
|
||||||
|
add_executable(gif2h5 IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target gif2h5-shared
|
||||||
|
add_executable(gif2h5-shared IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h52gif
|
||||||
|
add_executable(h52gif IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h52gif-shared
|
||||||
|
add_executable(h52gif-shared IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5watch
|
||||||
|
add_executable(h5watch IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target h5watch-shared
|
||||||
|
add_executable(h5watch-shared IMPORTED)
|
||||||
|
|
||||||
|
# Create imported target hdf5_cpp-static
|
||||||
|
add_library(hdf5_cpp-static STATIC IMPORTED)
|
||||||
|
|
||||||
|
set_target_properties(hdf5_cpp-static PROPERTIES
|
||||||
|
INTERFACE_INCLUDE_DIRECTORIES "${_IMPORT_PREFIX}/include;${_IMPORT_PREFIX}/include"
|
||||||
|
INTERFACE_LINK_LIBRARIES "hdf5-static"
|
||||||
|
)
|
||||||
|
|
||||||
|
# Create imported target hdf5_cpp-shared
|
||||||
|
add_library(hdf5_cpp-shared SHARED IMPORTED)
|
||||||
|
|
||||||
|
set_target_properties(hdf5_cpp-shared PROPERTIES
|
||||||
|
INTERFACE_COMPILE_DEFINITIONS "H5_BUILT_AS_DYNAMIC_LIB"
|
||||||
|
INTERFACE_INCLUDE_DIRECTORIES "${_IMPORT_PREFIX}/include;${_IMPORT_PREFIX}/include"
|
||||||
|
INTERFACE_LINK_LIBRARIES "hdf5-shared"
|
||||||
|
)
|
||||||
|
|
||||||
|
# Create imported target hdf5_hl_cpp-static
|
||||||
|
add_library(hdf5_hl_cpp-static STATIC IMPORTED)
|
||||||
|
|
||||||
|
set_target_properties(hdf5_hl_cpp-static PROPERTIES
|
||||||
|
INTERFACE_INCLUDE_DIRECTORIES "${_IMPORT_PREFIX}/include;${_IMPORT_PREFIX}/include"
|
||||||
|
INTERFACE_LINK_LIBRARIES "hdf5_hl-static;hdf5-static"
|
||||||
|
)
|
||||||
|
|
||||||
|
# Create imported target hdf5_hl_cpp-shared
|
||||||
|
add_library(hdf5_hl_cpp-shared SHARED IMPORTED)
|
||||||
|
|
||||||
|
set_target_properties(hdf5_hl_cpp-shared PROPERTIES
|
||||||
|
INTERFACE_COMPILE_DEFINITIONS "H5_BUILT_AS_DYNAMIC_LIB"
|
||||||
|
INTERFACE_INCLUDE_DIRECTORIES "${_IMPORT_PREFIX}/include;${_IMPORT_PREFIX}/include"
|
||||||
|
INTERFACE_LINK_LIBRARIES "hdf5_hl-shared;hdf5-shared"
|
||||||
|
)
|
||||||
|
|
||||||
|
if(CMAKE_VERSION VERSION_LESS 2.8.12)
|
||||||
|
message(FATAL_ERROR "This file relies on consumers using CMake 2.8.12 or greater.")
|
||||||
|
endif()
|
||||||
|
|
||||||
|
# Load information for each installed configuration.
|
||||||
|
get_filename_component(_DIR "${CMAKE_CURRENT_LIST_FILE}" PATH)
|
||||||
|
file(GLOB CONFIG_FILES "${_DIR}/hdf5-targets-*.cmake")
|
||||||
|
foreach(f ${CONFIG_FILES})
|
||||||
|
include(${f})
|
||||||
|
endforeach()
|
||||||
|
|
||||||
|
# Cleanup temporary variables.
|
||||||
|
set(_IMPORT_PREFIX)
|
||||||
|
|
||||||
|
# Loop over all imported files and verify that they actually exist
|
||||||
|
foreach(target ${_IMPORT_CHECK_TARGETS} )
|
||||||
|
foreach(file ${_IMPORT_CHECK_FILES_FOR_${target}} )
|
||||||
|
if(NOT EXISTS "${file}" )
|
||||||
|
message(FATAL_ERROR "The imported target \"${target}\" references the file
|
||||||
|
\"${file}\"
|
||||||
|
but this file does not exist. Possible reasons include:
|
||||||
|
* The file was deleted, renamed, or moved to another location.
|
||||||
|
* An install or uninstall procedure did not complete successfully.
|
||||||
|
* The installation package was faulty and contained
|
||||||
|
\"${CMAKE_CURRENT_LIST_FILE}\"
|
||||||
|
but not all the files it references.
|
||||||
|
")
|
||||||
|
endif()
|
||||||
|
endforeach()
|
||||||
|
unset(_IMPORT_CHECK_FILES_FOR_${target})
|
||||||
|
endforeach()
|
||||||
|
unset(_IMPORT_CHECK_TARGETS)
|
||||||
|
|
||||||
|
# This file does not depend on other imported targets which have
|
||||||
|
# been exported from the same project but in a separate export set.
|
||||||
|
|
||||||
|
# Commands beyond this point should not need to know the version.
|
||||||
|
set(CMAKE_IMPORT_FILE_VERSION)
|
||||||
|
cmake_policy(POP)
|
||||||
|
|
@ -0,0 +1,789 @@
|
||||||
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
|
||||||
|
* Copyright by The HDF Group. *
|
||||||
|
* Copyright by the Board of Trustees of the University of Illinois. *
|
||||||
|
* All rights reserved. *
|
||||||
|
* *
|
||||||
|
* This file is part of HDF5. The full HDF5 copyright notice, including *
|
||||||
|
* terms governing use, modification, and redistribution, is contained in *
|
||||||
|
* the COPYING file, which can be found at the root of the source code *
|
||||||
|
* distribution tree, or in https://www.hdfgroup.org/licenses. *
|
||||||
|
* If you do not have access to either file, you may request a copy from *
|
||||||
|
* help@hdfgroup.org. *
|
||||||
|
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
|
||||||
|
|
||||||
|
/*-------------------------------------------------------------------------
|
||||||
|
*
|
||||||
|
* Created: H5ACpublic.h
|
||||||
|
* Jul 10 1997
|
||||||
|
* Robb Matzke
|
||||||
|
*
|
||||||
|
* Purpose: Public include file for cache functions.
|
||||||
|
*
|
||||||
|
*-------------------------------------------------------------------------
|
||||||
|
*/
|
||||||
|
#ifndef H5ACpublic_H
|
||||||
|
#define H5ACpublic_H
|
||||||
|
|
||||||
|
/* Public headers needed by this file */
|
||||||
|
#include "H5public.h"
|
||||||
|
#include "H5Cpublic.h"
|
||||||
|
|
||||||
|
#ifdef __cplusplus
|
||||||
|
extern "C" {
|
||||||
|
#endif
|
||||||
|
|
||||||
|
/****************************************************************************
|
||||||
|
*
|
||||||
|
* structure H5AC_cache_config_t
|
||||||
|
*
|
||||||
|
* H5AC_cache_config_t is a public structure intended for use in public APIs.
|
||||||
|
* At least in its initial incarnation, it is basically a copy of struct
|
||||||
|
* H5C_auto_size_ctl_t, minus the report_fcn field, and plus the
|
||||||
|
* dirty_bytes_threshold field.
|
||||||
|
*
|
||||||
|
* The report_fcn field is omitted, as including it would require us to
|
||||||
|
* make H5C_t structure public.
|
||||||
|
*
|
||||||
|
* The dirty_bytes_threshold field does not appear in H5C_auto_size_ctl_t,
|
||||||
|
* as synchronization between caches on different processes is handled at
|
||||||
|
* the H5AC level, not at the level of H5C. Note however that there is
|
||||||
|
* considerable interaction between this value and the other fields in this
|
||||||
|
* structure.
|
||||||
|
*
|
||||||
|
* Similarly, the open_trace_file, close_trace_file, and trace_file_name
|
||||||
|
* fields do not appear in H5C_auto_size_ctl_t, as most trace file
|
||||||
|
* issues are handled at the H5AC level. The one exception is storage of
|
||||||
|
* the pointer to the trace file, which is handled by H5C.
|
||||||
|
*
|
||||||
|
* The structure is in H5ACpublic.h as we may wish to allow different
|
||||||
|
* configuration options for metadata and raw data caches.
|
||||||
|
*
|
||||||
|
* The fields of the structure are discussed individually below:
|
||||||
|
*
|
||||||
|
* version: Integer field containing the version number of this version
|
||||||
|
* of the H5AC_cache_config_t structure. Any instance of
|
||||||
|
* H5AC_cache_config_t passed to the cache must have a known
|
||||||
|
* version number, or an error will be flagged.
|
||||||
|
*
|
||||||
|
* rpt_fcn_enabled: Boolean field used to enable and disable the default
|
||||||
|
* reporting function. This function is invoked every time the
|
||||||
|
* automatic cache resize code is run, and reports on its activities.
|
||||||
|
*
|
||||||
|
* This is a debugging function, and should normally be turned off.
|
||||||
|
*
|
||||||
|
* open_trace_file: Boolean field indicating whether the trace_file_name
|
||||||
|
* field should be used to open a trace file for the cache.
|
||||||
|
*
|
||||||
|
* *** DEPRECATED *** Use H5Fstart/stop logging functions instead
|
||||||
|
*
|
||||||
|
* The trace file is a debugging feature that allow the capture of
|
||||||
|
* top level metadata cache requests for purposes of debugging and/or
|
||||||
|
* optimization. This field should normally be set to FALSE, as
|
||||||
|
* trace file collection imposes considerable overhead.
|
||||||
|
*
|
||||||
|
* This field should only be set to TRUE when the trace_file_name
|
||||||
|
* contains the full path of the desired trace file, and either
|
||||||
|
* there is no open trace file on the cache, or the close_trace_file
|
||||||
|
* field is also TRUE.
|
||||||
|
*
|
||||||
|
* close_trace_file: Boolean field indicating whether the current trace
|
||||||
|
* file (if any) should be closed.
|
||||||
|
*
|
||||||
|
* *** DEPRECATED *** Use H5Fstart/stop logging functions instead
|
||||||
|
*
|
||||||
|
* See the above comments on the open_trace_file field. This field
|
||||||
|
* should be set to FALSE unless there is an open trace file on the
|
||||||
|
* cache that you wish to close.
|
||||||
|
*
|
||||||
|
* trace_file_name: Full path of the trace file to be opened if the
|
||||||
|
* open_trace_file field is TRUE.
|
||||||
|
*
|
||||||
|
* *** DEPRECATED *** Use H5Fstart/stop logging functions instead
|
||||||
|
*
|
||||||
|
* In the parallel case, an ascii representation of the mpi rank of
|
||||||
|
* the process will be appended to the file name to yield a unique
|
||||||
|
* trace file name for each process.
|
||||||
|
*
|
||||||
|
* The length of the path must not exceed H5AC__MAX_TRACE_FILE_NAME_LEN
|
||||||
|
* characters.
|
||||||
|
*
|
||||||
|
* evictions_enabled: Boolean field used to either report the current
|
||||||
|
* evictions enabled status of the cache, or to set the cache's
|
||||||
|
* evictions enabled status.
|
||||||
|
*
|
||||||
|
* In general, the metadata cache should always be allowed to
|
||||||
|
* evict entries. However, in some cases it is advantageous to
|
||||||
|
* disable evictions briefly, and thereby postpone metadata
|
||||||
|
* writes. However, this must be done with care, as the cache
|
||||||
|
* can grow quickly. If you do this, re-enable evictions as
|
||||||
|
* soon as possible and monitor cache size.
|
||||||
|
*
|
||||||
|
* At present, evictions can only be disabled if automatic
|
||||||
|
* cache resizing is also disabled (that is, ( incr_mode ==
|
||||||
|
* H5C_incr__off ) && ( decr_mode == H5C_decr__off )). There
|
||||||
|
* is no logical reason why this should be so, but it simplifies
|
||||||
|
* implementation and testing, and I can't think of any reason
|
||||||
|
* why it would be desirable. If you can think of one, I'll
|
||||||
|
* revisit the issue.
|
||||||
|
*
|
||||||
|
* set_initial_size: Boolean flag indicating whether the size of the
|
||||||
|
* initial size of the cache is to be set to the value given in
|
||||||
|
* the initial_size field. If set_initial_size is FALSE, the
|
||||||
|
* initial_size field is ignored.
|
||||||
|
*
|
||||||
|
* initial_size: If enabled, this field contain the size the cache is
|
||||||
|
* to be set to upon receipt of this structure. Needless to say,
|
||||||
|
* initial_size must lie in the closed interval [min_size, max_size].
|
||||||
|
*
|
||||||
|
* min_clean_fraction: double in the range 0 to 1 indicating the fraction
|
||||||
|
* of the cache that is to be kept clean. This field is only used
|
||||||
|
* in parallel mode. Typical values are 0.1 to 0.5.
|
||||||
|
*
|
||||||
|
* max_size: Maximum size to which the cache can be adjusted. The
|
||||||
|
* supplied value must fall in the closed interval
|
||||||
|
* [MIN_MAX_CACHE_SIZE, MAX_MAX_CACHE_SIZE]. Also, max_size must
|
||||||
|
* be greater than or equal to min_size.
|
||||||
|
*
|
||||||
|
* min_size: Minimum size to which the cache can be adjusted. The
|
||||||
|
* supplied value must fall in the closed interval
|
||||||
|
* [H5C__MIN_MAX_CACHE_SIZE, H5C__MAX_MAX_CACHE_SIZE]. Also, min_size
|
||||||
|
* must be less than or equal to max_size.
|
||||||
|
*
|
||||||
|
* epoch_length: Number of accesses on the cache over which to collect
|
||||||
|
* hit rate stats before running the automatic cache resize code,
|
||||||
|
* if it is enabled.
|
||||||
|
*
|
||||||
|
* At the end of an epoch, we discard prior hit rate data and start
|
||||||
|
* collecting afresh. The epoch_length must lie in the closed
|
||||||
|
* interval [H5C__MIN_AR_EPOCH_LENGTH, H5C__MAX_AR_EPOCH_LENGTH].
|
||||||
|
*
|
||||||
|
*
|
||||||
|
* Cache size increase control fields:
|
||||||
|
*
|
||||||
|
* incr_mode: Instance of the H5C_cache_incr_mode enumerated type whose
|
||||||
|
* value indicates how we determine whether the cache size should be
|
||||||
|
* increased. At present there are two possible values:
|
||||||
|
*
|
||||||
|
* H5C_incr__off: Don't attempt to increase the size of the cache
|
||||||
|
* automatically.
|
||||||
|
*
|
||||||
|
* When this increment mode is selected, the remaining fields
|
||||||
|
* in the cache size increase section ar ignored.
|
||||||
|
*
|
||||||
|
* H5C_incr__threshold: Attempt to increase the size of the cache
|
||||||
|
* whenever the average hit rate over the last epoch drops
|
||||||
|
* below the value supplied in the lower_hr_threshold
|
||||||
|
* field.
|
||||||
|
*
|
||||||
|
* Note that this attempt will fail if the cache is already
|
||||||
|
* at its maximum size, or if the cache is not already using
|
||||||
|
* all available space.
|
||||||
|
*
|
||||||
|
* Note that you must set decr_mode to H5C_incr__off if you
|
||||||
|
* disable metadata cache entry evictions.
|
||||||
|
*
|
||||||
|
* lower_hr_threshold: Lower hit rate threshold. If the increment mode
|
||||||
|
* (incr_mode) is H5C_incr__threshold and the hit rate drops below the
|
||||||
|
* value supplied in this field in an epoch, increment the cache size by
|
||||||
|
* size_increment. Note that cache size may not be incremented above
|
||||||
|
* max_size, and that the increment may be further restricted by the
|
||||||
|
* max_increment field if it is enabled.
|
||||||
|
*
|
||||||
|
* When enabled, this field must contain a value in the range [0.0, 1.0].
|
||||||
|
* Depending on the incr_mode selected, it may also have to be less than
|
||||||
|
* upper_hr_threshold.
|
||||||
|
*
|
||||||
|
* increment: Double containing the multiplier used to derive the new
|
||||||
|
* cache size from the old if a cache size increment is triggered.
|
||||||
|
* The increment must be greater than 1.0, and should not exceed 2.0.
|
||||||
|
*
|
||||||
|
* The new cache size is obtained my multiplying the current max cache
|
||||||
|
* size by the increment, and then clamping to max_size and to stay
|
||||||
|
* within the max_increment as necessary.
|
||||||
|
*
|
||||||
|
* apply_max_increment: Boolean flag indicating whether the max_increment
|
||||||
|
* field should be used to limit the maximum cache size increment.
|
||||||
|
*
|
||||||
|
* max_increment: If enabled by the apply_max_increment field described
|
||||||
|
* above, this field contains the maximum number of bytes by which the
|
||||||
|
* cache size can be increased in a single re-size.
|
||||||
|
*
|
||||||
|
* flash_incr_mode: Instance of the H5C_cache_flash_incr_mode enumerated
|
||||||
|
* type whose value indicates whether and by which algorithm we should
|
||||||
|
* make flash increases in the size of the cache to accommodate insertion
|
||||||
|
* of large entries and large increases in the size of a single entry.
|
||||||
|
*
|
||||||
|
* The addition of the flash increment mode was occasioned by performance
|
||||||
|
* problems that appear when a local heap is increased to a size in excess
|
||||||
|
* of the current cache size. While the existing re-size code dealt with
|
||||||
|
* this eventually, performance was very bad for the remainder of the
|
||||||
|
* epoch.
|
||||||
|
*
|
||||||
|
* At present, there are two possible values for the flash_incr_mode:
|
||||||
|
*
|
||||||
|
* H5C_flash_incr__off: Don't perform flash increases in the size of
|
||||||
|
* the cache.
|
||||||
|
*
|
||||||
|
* H5C_flash_incr__add_space: Let x be either the size of a newly
|
||||||
|
* newly inserted entry, or the number of bytes by which the
|
||||||
|
* size of an existing entry has been increased.
|
||||||
|
*
|
||||||
|
* If
|
||||||
|
* x > flash_threshold * current max cache size,
|
||||||
|
*
|
||||||
|
* increase the current maximum cache size by x * flash_multiple
|
||||||
|
* less any free space in the cache, and star a new epoch. For
|
||||||
|
* now at least, pay no attention to the maximum increment.
|
||||||
|
*
|
||||||
|
* In both of the above cases, the flash increment pays no attention to
|
||||||
|
* the maximum increment (at least in this first incarnation), but DOES
|
||||||
|
* stay within max_size.
|
||||||
|
*
|
||||||
|
* With a little thought, it should be obvious that the above flash
|
||||||
|
* cache size increase algorithm is not sufficient for all circumstances
|
||||||
|
* -- for example, suppose the user round robins through
|
||||||
|
* (1/flash_threshold) +1 groups, adding one data set to each on each
|
||||||
|
* pass. Then all will increase in size at about the same time, requiring
|
||||||
|
* the max cache size to at least double to maintain acceptable
|
||||||
|
* performance, however the above flash increment algorithm will not be
|
||||||
|
* triggered.
|
||||||
|
*
|
||||||
|
* Hopefully, the add space algorithms detailed above will be sufficient
|
||||||
|
* for the performance problems encountered to date. However, we should
|
||||||
|
* expect to revisit the issue.
|
||||||
|
*
|
||||||
|
* flash_multiple: Double containing the multiple described above in the
|
||||||
|
* H5C_flash_incr__add_space section of the discussion of the
|
||||||
|
* flash_incr_mode section. This field is ignored unless flash_incr_mode
|
||||||
|
* is H5C_flash_incr__add_space.
|
||||||
|
*
|
||||||
|
* flash_threshold: Double containing the factor by which current max cache
|
||||||
|
* size is multiplied to obtain the size threshold for the add_space flash
|
||||||
|
* increment algorithm. The field is ignored unless flash_incr_mode is
|
||||||
|
* H5C_flash_incr__add_space.
|
||||||
|
*
|
||||||
|
*
|
||||||
|
* Cache size decrease control fields:
|
||||||
|
*
|
||||||
|
* decr_mode: Instance of the H5C_cache_decr_mode enumerated type whose
|
||||||
|
* value indicates how we determine whether the cache size should be
|
||||||
|
* decreased. At present there are four possibilities.
|
||||||
|
*
|
||||||
|
* H5C_decr__off: Don't attempt to decrease the size of the cache
|
||||||
|
* automatically.
|
||||||
|
*
|
||||||
|
* When this increment mode is selected, the remaining fields
|
||||||
|
* in the cache size decrease section are ignored.
|
||||||
|
*
|
||||||
|
* H5C_decr__threshold: Attempt to decrease the size of the cache
|
||||||
|
* whenever the average hit rate over the last epoch rises
|
||||||
|
* above the value supplied in the upper_hr_threshold
|
||||||
|
* field.
|
||||||
|
*
|
||||||
|
* H5C_decr__age_out: At the end of each epoch, search the cache for
|
||||||
|
* entries that have not been accessed for at least the number
|
||||||
|
* of epochs specified in the epochs_before_eviction field, and
|
||||||
|
* evict these entries. Conceptually, the maximum cache size
|
||||||
|
* is then decreased to match the new actual cache size. However,
|
||||||
|
* this reduction may be modified by the min_size, the
|
||||||
|
* max_decrement, and/or the empty_reserve.
|
||||||
|
*
|
||||||
|
* H5C_decr__age_out_with_threshold: Same as age_out, but we only
|
||||||
|
* attempt to reduce the cache size when the hit rate observed
|
||||||
|
* over the last epoch exceeds the value provided in the
|
||||||
|
* upper_hr_threshold field.
|
||||||
|
*
|
||||||
|
* Note that you must set decr_mode to H5C_decr__off if you
|
||||||
|
* disable metadata cache entry evictions.
|
||||||
|
*
|
||||||
|
* upper_hr_threshold: Upper hit rate threshold. The use of this field
|
||||||
|
* varies according to the current decr_mode:
|
||||||
|
*
|
||||||
|
* H5C_decr__off or H5C_decr__age_out: The value of this field is
|
||||||
|
* ignored.
|
||||||
|
*
|
||||||
|
* H5C_decr__threshold: If the hit rate exceeds this threshold in any
|
||||||
|
* epoch, attempt to decrement the cache size by size_decrement.
|
||||||
|
*
|
||||||
|
* Note that cache size may not be decremented below min_size.
|
||||||
|
*
|
||||||
|
* Note also that if the upper_threshold is 1.0, the cache size
|
||||||
|
* will never be reduced.
|
||||||
|
*
|
||||||
|
* H5C_decr__age_out_with_threshold: If the hit rate exceeds this
|
||||||
|
* threshold in any epoch, attempt to reduce the cache size
|
||||||
|
* by evicting entries that have not been accessed for more
|
||||||
|
* than the specified number of epochs.
|
||||||
|
*
|
||||||
|
* decrement: This field is only used when the decr_mode is
|
||||||
|
* H5C_decr__threshold.
|
||||||
|
*
|
||||||
|
* The field is a double containing the multiplier used to derive the
|
||||||
|
* new cache size from the old if a cache size decrement is triggered.
|
||||||
|
* The decrement must be in the range 0.0 (in which case the cache will
|
||||||
|
* try to contract to its minimum size) to 1.0 (in which case the
|
||||||
|
* cache will never shrink).
|
||||||
|
*
|
||||||
|
* apply_max_decrement: Boolean flag used to determine whether decrements
|
||||||
|
* in cache size are to be limited by the max_decrement field.
|
||||||
|
*
|
||||||
|
* max_decrement: Maximum number of bytes by which the cache size can be
|
||||||
|
* decreased in a single re-size. Note that decrements may also be
|
||||||
|
* restricted by the min_size of the cache, and (in age out modes) by
|
||||||
|
* the empty_reserve field.
|
||||||
|
*
|
||||||
|
* epochs_before_eviction: Integer field used in H5C_decr__age_out and
|
||||||
|
* H5C_decr__age_out_with_threshold decrement modes.
|
||||||
|
*
|
||||||
|
* This field contains the number of epochs an entry must remain
|
||||||
|
* unaccessed before it is evicted in an attempt to reduce the
|
||||||
|
* cache size. If applicable, this field must lie in the range
|
||||||
|
* [1, H5C__MAX_EPOCH_MARKERS].
|
||||||
|
*
|
||||||
|
* apply_empty_reserve: Boolean field controlling whether the empty_reserve
|
||||||
|
* field is to be used in computing the new cache size when the
|
||||||
|
* decr_mode is H5C_decr__age_out or H5C_decr__age_out_with_threshold.
|
||||||
|
*
|
||||||
|
* empty_reserve: To avoid a constant racheting down of cache size by small
|
||||||
|
* amounts in the H5C_decr__age_out and H5C_decr__age_out_with_threshold
|
||||||
|
* modes, this field allows one to require that any cache size
|
||||||
|
* reductions leave the specified fraction of unused space in the cache.
|
||||||
|
*
|
||||||
|
* The value of this field must be in the range [0.0, 1.0]. I would
|
||||||
|
* expect typical values to be in the range of 0.01 to 0.1.
|
||||||
|
*
|
||||||
|
*
|
||||||
|
* Parallel Configuration Fields:
|
||||||
|
*
|
||||||
|
* In PHDF5, all operations that modify metadata must be executed collectively.
|
||||||
|
*
|
||||||
|
* We used to think that this was enough to ensure consistency across the
|
||||||
|
* metadata caches, but since we allow processes to read metadata individually,
|
||||||
|
* the order of dirty entries in the LRU list can vary across processes,
|
||||||
|
* which can result in inconsistencies between the caches.
|
||||||
|
*
|
||||||
|
* PHDF5 uses several strategies to prevent such inconsistencies in metadata,
|
||||||
|
* all of which use the fact that the same stream of dirty metadata is seen
|
||||||
|
* by all processes for purposes of synchronization. This is done by
|
||||||
|
* having each process count the number of bytes of dirty metadata generated,
|
||||||
|
* and then running a "sync point" whenever this count exceeds a user
|
||||||
|
* specified threshold (see dirty_bytes_threshold below).
|
||||||
|
*
|
||||||
|
* The current metadata write strategy is indicated by the
|
||||||
|
* metadata_write_strategy field. The possible values of this field, along
|
||||||
|
* with the associated metadata write strategies are discussed below.
|
||||||
|
*
|
||||||
|
* dirty_bytes_threshold: Threshold of dirty byte creation used to
|
||||||
|
* synchronize updates between caches. (See above for outline and
|
||||||
|
* motivation.)
|
||||||
|
*
|
||||||
|
* This value MUST be consistent across all processes accessing the
|
||||||
|
* file. This field is ignored unless HDF5 has been compiled for
|
||||||
|
* parallel.
|
||||||
|
*
|
||||||
|
* metadata_write_strategy: Integer field containing a code indicating the
|
||||||
|
* desired metadata write strategy. The valid values of this field
|
||||||
|
* are enumerated and discussed below:
|
||||||
|
*
|
||||||
|
*
|
||||||
|
* H5AC_METADATA_WRITE_STRATEGY__PROCESS_0_ONLY:
|
||||||
|
*
|
||||||
|
* When metadata_write_strategy is set to this value, only process
|
||||||
|
* zero is allowed to write dirty metadata to disk. All other
|
||||||
|
* processes must retain dirty metadata until they are informed at
|
||||||
|
* a sync point that the dirty metadata in question has been written
|
||||||
|
* to disk.
|
||||||
|
*
|
||||||
|
* When the sync point is reached (or when there is a user generated
|
||||||
|
* flush), process zero flushes sufficient entries to bring it into
|
||||||
|
* compliance with its min clean size (or flushes all dirty entries in
|
||||||
|
* the case of a user generated flush), broad casts the list of
|
||||||
|
* entries just cleaned to all the other processes, and then exits
|
||||||
|
* the sync point.
|
||||||
|
*
|
||||||
|
* Upon receipt of the broadcast, the other processes mark the indicated
|
||||||
|
* entries as clean, and leave the sync point as well.
|
||||||
|
*
|
||||||
|
*
|
||||||
|
* H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED:
|
||||||
|
*
|
||||||
|
* In the distributed metadata write strategy, process zero still makes
|
||||||
|
* the decisions as to what entries should be flushed, but the actual
|
||||||
|
* flushes are distributed across the processes in the computation to
|
||||||
|
* the extent possible.
|
||||||
|
*
|
||||||
|
* In this strategy, when a sync point is triggered (either by dirty
|
||||||
|
* metadata creation or manual flush), all processes enter a barrier.
|
||||||
|
*
|
||||||
|
* On the other side of the barrier, process 0 constructs an ordered
|
||||||
|
* list of the entries to be flushed, and then broadcasts this list
|
||||||
|
* to the caches in all the processes.
|
||||||
|
*
|
||||||
|
* All processes then scan the list of entries to be flushed, flushing
|
||||||
|
* some, and marking the rest as clean. The algorithm for this purpose
|
||||||
|
* ensures that each entry in the list is flushed exactly once, and
|
||||||
|
* all are marked clean in each cache.
|
||||||
|
*
|
||||||
|
* Note that in the case of a flush of the cache, no message passing
|
||||||
|
* is necessary, as all processes have the same list of dirty entries,
|
||||||
|
* and all of these entries must be flushed. Thus in this case it is
|
||||||
|
* sufficient for each process to sort its list of dirty entries after
|
||||||
|
* leaving the initial barrier, and use this list as if it had been
|
||||||
|
* received from process zero.
|
||||||
|
*
|
||||||
|
* To avoid possible messages from the past/future, all caches must
|
||||||
|
* wait until all caches are done before leaving the sync point.
|
||||||
|
*
|
||||||
|
****************************************************************************/
|
||||||
|
|
||||||
|
#define H5AC__CURR_CACHE_CONFIG_VERSION 1
|
||||||
|
#define H5AC__MAX_TRACE_FILE_NAME_LEN 1024
|
||||||
|
|
||||||
|
#define H5AC_METADATA_WRITE_STRATEGY__PROCESS_0_ONLY 0
|
||||||
|
#define H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED 1
|
||||||
|
|
||||||
|
/**
|
||||||
|
* H5AC_cache_config_t is a public structure intended for use in public APIs.
|
||||||
|
* At least in its initial incarnation, it is basically a copy of \c struct
|
||||||
|
* \c H5C_auto_size_ctl_t, minus the \c report_fcn field, and plus the
|
||||||
|
* \c dirty_bytes_threshold field.
|
||||||
|
*
|
||||||
|
* The \c report_fcn field is omitted, as including it would require us to make
|
||||||
|
* \c H5C_t structure public.
|
||||||
|
*
|
||||||
|
* The \c dirty_bytes_threshold field does not appear in \c H5C_auto_size_ctl_t,
|
||||||
|
* as synchronization between caches on different processes is handled at the \c
|
||||||
|
* H5AC level, not at the level of \c H5C. Note however that there is
|
||||||
|
* considerable interaction between this value and the other fields in this
|
||||||
|
* structure.
|
||||||
|
*
|
||||||
|
* Similarly, the \c open_trace_file, \c close_trace_file, and \c
|
||||||
|
* trace_file_name fields do not appear in \c H5C_auto_size_ctl_t, as most trace
|
||||||
|
* file issues are handled at the \c H5AC level. The one exception is storage
|
||||||
|
* of the pointer to the trace file, which is handled by \c H5C.
|
||||||
|
*
|
||||||
|
* The structure is in H5ACpublic.h as we may wish to allow different
|
||||||
|
* configuration options for metadata and raw data caches.
|
||||||
|
*/
|
||||||
|
|
||||||
|
//! <!-- [H5AC_cache_config_t_snip] -->
|
||||||
|
typedef struct H5AC_cache_config_t {
|
||||||
|
/* general configuration fields: */
|
||||||
|
//! <!-- [H5AC_cache_config_t_general_snip] -->
|
||||||
|
int version;
|
||||||
|
/**< Integer field indicating the the version of the H5AC_cache_config_t
|
||||||
|
* in use. This field should be set to #H5AC__CURR_CACHE_CONFIG_VERSION
|
||||||
|
* (defined in H5ACpublic.h). */
|
||||||
|
|
||||||
|
hbool_t rpt_fcn_enabled;
|
||||||
|
/**< Boolean flag indicating whether the adaptive cache resize report
|
||||||
|
* function is enabled. This field should almost always be set to disabled
|
||||||
|
* (0). Since resize algorithm activity is reported via stdout, it MUST be
|
||||||
|
* set to disabled (0) on Windows machines.\n
|
||||||
|
* The report function is not supported code, and can be expected to change
|
||||||
|
* between versions of the library. Use it at your own risk. */
|
||||||
|
|
||||||
|
hbool_t open_trace_file;
|
||||||
|
/**< Boolean field indicating whether the
|
||||||
|
* \ref H5AC_cache_config_t.trace_file_name "trace_file_name"
|
||||||
|
* field should be used to open a trace file for the cache.\n
|
||||||
|
* The trace file is a debugging feature that allows the capture
|
||||||
|
* of top level metadata cache requests for purposes of debugging
|
||||||
|
* and/or optimization. This field should normally be set to 0, as
|
||||||
|
* trace file collection imposes considerable overhead.\n
|
||||||
|
* This field should only be set to 1 when the
|
||||||
|
* \ref H5AC_cache_config_t.trace_file_name "trace_file_name"
|
||||||
|
* contains the full path of the desired trace file, and either
|
||||||
|
* there is no open trace file on the cache, or the
|
||||||
|
* \ref H5AC_cache_config_t.close_trace_file "close_trace_file"
|
||||||
|
* field is also 1.\n
|
||||||
|
* The trace file feature is unsupported unless used at the
|
||||||
|
* direction of The HDF Group. It is intended to allow The HDF
|
||||||
|
* Group to collect a trace of cache activity in cases of occult
|
||||||
|
* failures and/or poor performance seen in the field, so as to aid
|
||||||
|
* in reproduction in the lab. If you use it absent the direction
|
||||||
|
* of The HDF Group, you are on your own. */
|
||||||
|
|
||||||
|
hbool_t close_trace_file;
|
||||||
|
/**< Boolean field indicating whether the current trace file
|
||||||
|
*(if any) should be closed.\n
|
||||||
|
* See the above comments on the \ref H5AC_cache_config_t.open_trace_file
|
||||||
|
* "open_trace_file" field. This field should be set to 0 unless there is
|
||||||
|
* an open trace file on the cache that you wish to close.\n
|
||||||
|
* The trace file feature is unsupported unless used at the direction of
|
||||||
|
* The HDF Group. It is intended to allow The HDF Group to collect a trace
|
||||||
|
* of cache activity in cases of occult failures and/or poor performance
|
||||||
|
* seen in the field, so as to aid in reproduction in the lab. If you use
|
||||||
|
* it absent the direction of The HDF Group, you are on your own. */
|
||||||
|
|
||||||
|
char trace_file_name[H5AC__MAX_TRACE_FILE_NAME_LEN + 1];
|
||||||
|
/**< Full path of the trace file to be opened if the
|
||||||
|
* \ref H5AC_cache_config_t.open_trace_file "open_trace_file" field is set
|
||||||
|
* to 1.\n
|
||||||
|
* In the parallel case, an ascii representation of the MPI rank of the
|
||||||
|
* process will be appended to the file name to yield a unique trace file
|
||||||
|
* name for each process.\n
|
||||||
|
* The length of the path must not exceed #H5AC__MAX_TRACE_FILE_NAME_LEN
|
||||||
|
* characters.\n
|
||||||
|
* The trace file feature is unsupported unless used at the direction of
|
||||||
|
* The HDF Group. It is intended to allow The HDF Group to collect a trace
|
||||||
|
* of cache activity in cases of occult failures and/or poor performance
|
||||||
|
* seen in the field, so as to aid in reproduction in the lab. If you use
|
||||||
|
* it absent the direction of The HDF Group, you are on your own. */
|
||||||
|
|
||||||
|
hbool_t evictions_enabled;
|
||||||
|
/**< A boolean flag indicating whether evictions from the metadata cache
|
||||||
|
* are enabled. This flag is initially set to enabled (1).\n
|
||||||
|
* In rare circumstances, the raw data throughput quirements may be so high
|
||||||
|
* that the user wishes to postpone metadata writes so as to reserve I/O
|
||||||
|
* throughput for raw data. The \p evictions_enabled field exists to allow
|
||||||
|
* this. However, this is an extreme step, and you have no business doing
|
||||||
|
* it unless you have read the User Guide section on metadata caching, and
|
||||||
|
* have considered all other options carefully.\n
|
||||||
|
* The \p evictions_enabled field may not be set to disabled (0)
|
||||||
|
* unless all adaptive cache resizing code is disabled via the
|
||||||
|
* \ref H5AC_cache_config_t.incr_mode "incr_mode",
|
||||||
|
* \ref H5AC_cache_config_t.flash_incr_mode "flash_incr_mode",
|
||||||
|
* \ref H5AC_cache_config_t.decr_mode "decr_mode" fields.\n
|
||||||
|
* When this flag is set to disabled (\c 0), the metadata cache will not
|
||||||
|
* attempt to evict entries to make space for new entries, and thus will
|
||||||
|
* grow without bound.\n
|
||||||
|
* Evictions will be re-enabled when this field is set back to \c 1.
|
||||||
|
* This should be done as soon as possible. */
|
||||||
|
|
||||||
|
hbool_t set_initial_size;
|
||||||
|
/**< Boolean flag indicating whether the cache should be created
|
||||||
|
* with a user specified initial size. */
|
||||||
|
|
||||||
|
size_t initial_size;
|
||||||
|
/**< If \ref H5AC_cache_config_t.set_initial_size "set_initial_size"
|
||||||
|
* is set to 1, \p initial_size must contain he desired initial size in
|
||||||
|
* bytes. This value must lie in the closed interval
|
||||||
|
* [ \p min_size, \p max_size ]. (see below) */
|
||||||
|
|
||||||
|
double min_clean_fraction;
|
||||||
|
/**< This field specifies the minimum fraction of the cache
|
||||||
|
* that must be kept either clean or empty.\n
|
||||||
|
* The value must lie in the interval [0.0, 1.0]. 0.01 is a good place to
|
||||||
|
* start in the serial case. In the parallel case, a larger value is needed
|
||||||
|
* -- see the overview of the metadata cache in the
|
||||||
|
* “Metadata Caching in HDF5” section of the -- <em>HDF5 User’s Guide</em>
|
||||||
|
* for details. */
|
||||||
|
|
||||||
|
size_t max_size;
|
||||||
|
/**< Upper bound (in bytes) on the range of values that the
|
||||||
|
* adaptive cache resize code can select as the maximum cache size. */
|
||||||
|
|
||||||
|
size_t min_size;
|
||||||
|
/**< Lower bound (in bytes) on the range of values that the
|
||||||
|
* adaptive cache resize code can select as the minimum cache * size. */
|
||||||
|
|
||||||
|
long int epoch_length;
|
||||||
|
/**< Number of cache accesses between runs of the adaptive cache resize
|
||||||
|
* code. 50,000 is a good starting number. */
|
||||||
|
//! <!-- [H5AC_cache_config_t_general_snip] -->
|
||||||
|
|
||||||
|
/* size increase control fields: */
|
||||||
|
//! <!-- [H5AC_cache_config_t_incr_snip] -->
|
||||||
|
enum H5C_cache_incr_mode incr_mode;
|
||||||
|
/**< Enumerated value indicating the operational mode of the automatic
|
||||||
|
* cache size increase code. At present, only two values listed in
|
||||||
|
* #H5C_cache_incr_mode are legal. */
|
||||||
|
|
||||||
|
double lower_hr_threshold;
|
||||||
|
/**< Hit rate threshold used by the hit rate threshold cache size
|
||||||
|
* increment algorithm.\n
|
||||||
|
* When the hit rate over an epoch is below this threshold and the cache
|
||||||
|
* is full, the maximum size of the cache is multiplied by increment
|
||||||
|
* (below), and then clipped as necessary to stay within \p max_size, and
|
||||||
|
* possibly \p max_increment.\n
|
||||||
|
* This field must lie in the interval [0.0, 1.0]. 0.8 or 0.9 is a good
|
||||||
|
* place to start. */
|
||||||
|
|
||||||
|
double increment;
|
||||||
|
/**< Factor by which the hit rate threshold cache size increment
|
||||||
|
* algorithm multiplies the current cache max size to obtain a tentative
|
||||||
|
* new cache size.\n
|
||||||
|
* The actual cache size increase will be clipped to satisfy the \p max_size
|
||||||
|
* specified in the general configuration, and possibly max_increment
|
||||||
|
* below.\n
|
||||||
|
* The parameter must be greater than or equal to 1.0 -- 2.0 is a reasonable
|
||||||
|
* value.\n
|
||||||
|
* If you set it to 1.0, you will effectively disable cache size increases.
|
||||||
|
*/
|
||||||
|
|
||||||
|
hbool_t apply_max_increment;
|
||||||
|
/**< Boolean flag indicating whether an upper limit should be applied to
|
||||||
|
* the size of cache size increases. */
|
||||||
|
|
||||||
|
size_t max_increment;
|
||||||
|
/**< Maximum number of bytes by which cache size can be increased in a
|
||||||
|
* single step -- if applicable. */
|
||||||
|
|
||||||
|
enum H5C_cache_flash_incr_mode flash_incr_mode;
|
||||||
|
/**< Enumerated value indicating the operational mode of the flash cache
|
||||||
|
* size increase code. At present, only two listed values in
|
||||||
|
* #H5C_cache_flash_incr_mode are legal.*/
|
||||||
|
|
||||||
|
double flash_multiple;
|
||||||
|
/**< The factor by which the size of the triggering entry / entry size
|
||||||
|
* increase is multiplied to obtain the initial cache size increment. This
|
||||||
|
* increment may be reduced to reflect existing free space in the cache and
|
||||||
|
* the \p max_size field above.\n
|
||||||
|
* The parameter must lie in the interval [0.0, 1.0]. 0.1 or 0.05 is a good
|
||||||
|
* place to start.\n
|
||||||
|
* At present, this field must lie in the range [0.1, 10.0]. */
|
||||||
|
|
||||||
|
double flash_threshold;
|
||||||
|
/**< The factor by which the current maximum cache size is multiplied to
|
||||||
|
* obtain the minimum size entry / entry size increase which may trigger a
|
||||||
|
* flash cache size increase. \n
|
||||||
|
* At present, this value must lie in the range [0.1, 1.0]. */
|
||||||
|
//! <!-- [H5AC_cache_config_t_incr_snip] -->
|
||||||
|
|
||||||
|
/* size decrease control fields: */
|
||||||
|
//! <!-- [H5AC_cache_config_t_decr_snip] -->
|
||||||
|
enum H5C_cache_decr_mode decr_mode;
|
||||||
|
/**< Enumerated value indicating the operational mode of the tomatic
|
||||||
|
* cache size decrease code. At present, the values listed in
|
||||||
|
* #H5C_cache_decr_mode are legal.*/
|
||||||
|
|
||||||
|
double upper_hr_threshold;
|
||||||
|
/**< Hit rate threshold for the hit rate threshold and ageout with hit
|
||||||
|
* rate threshold cache size decrement algorithms.\n
|
||||||
|
* When \p decr_mode is #H5C_decr__threshold, and the hit rate over a given
|
||||||
|
* epoch exceeds the supplied threshold, the current maximum cache
|
||||||
|
* size is multiplied by decrement to obtain a tentative new (and smaller)
|
||||||
|
* maximum cache size.\n
|
||||||
|
* When \p decr_mode is #H5C_decr__age_out_with_threshold, there is
|
||||||
|
* no attempt to find and evict aged out entries unless the hit rate in
|
||||||
|
* the previous epoch exceeded the supplied threshold.\n
|
||||||
|
* This field must lie in the interval [0.0, 1.0].\n
|
||||||
|
* For #H5C_incr__threshold, .9995 or .99995 is a good place to start.\n
|
||||||
|
* For #H5C_decr__age_out_with_threshold, .999 might be more useful.*/
|
||||||
|
|
||||||
|
double decrement;
|
||||||
|
/**< In the hit rate threshold cache size decrease algorithm, this
|
||||||
|
* parameter contains the factor by which the current max cache size is
|
||||||
|
* multiplied to produce a tentative new cache size.\n
|
||||||
|
* The actual cache size decrease will be clipped to satisfy the
|
||||||
|
* \ref H5AC_cache_config_t.min_size "min_size" specified in the general
|
||||||
|
* configuration, and possibly \ref H5AC_cache_config_t.max_decrement
|
||||||
|
* "max_decrement".\n
|
||||||
|
* The parameter must be be in the interval [0.0, 1.0].\n
|
||||||
|
* If you set it to 1.0, you will effectively
|
||||||
|
* disable cache size decreases. 0.9 is a reasonable starting point. */
|
||||||
|
|
||||||
|
hbool_t apply_max_decrement;
|
||||||
|
/**< Boolean flag indicating ether an upper limit should be applied to
|
||||||
|
* the size of cache size decreases. */
|
||||||
|
|
||||||
|
size_t max_decrement;
|
||||||
|
/**< Maximum number of bytes by which the maximum cache size can be
|
||||||
|
* decreased in any single step -- if applicable.*/
|
||||||
|
|
||||||
|
int epochs_before_eviction;
|
||||||
|
/**< In the ageout based cache size reduction algorithms, this field
|
||||||
|
* contains the minimum number of epochs an entry must remain unaccessed in
|
||||||
|
* cache before the cache size reduction algorithm tries to evict it. 3 is a
|
||||||
|
* reasonable value. */
|
||||||
|
|
||||||
|
hbool_t apply_empty_reserve;
|
||||||
|
/**< Boolean flag indicating whether the ageout based decrement
|
||||||
|
* algorithms will maintain a empty reserve when decreasing cache size. */
|
||||||
|
|
||||||
|
double empty_reserve;
|
||||||
|
/**< Empty reserve as a fraction maximum cache size if applicable.\n When
|
||||||
|
* so directed, the ageout based algorithms will not decrease the maximum
|
||||||
|
* cache size unless the empty reserve can be met.\n The parameter must lie
|
||||||
|
* in the interval [0.0, 1.0]. 0.1 or 0.05 is a good place to start. */
|
||||||
|
//! <!-- [H5AC_cache_config_t_decr_snip] -->
|
||||||
|
|
||||||
|
/* parallel configuration fields: */
|
||||||
|
//! <!-- [H5AC_cache_config_t_parallel_snip] -->
|
||||||
|
size_t dirty_bytes_threshold;
|
||||||
|
/**< Threshold number of bytes of dirty metadata generation for
|
||||||
|
* triggering synchronizations of the metadata caches serving the target
|
||||||
|
* file in the parallel case.\n Synchronization occurs whenever the number
|
||||||
|
* of bytes of dirty metadata created since the last synchronization exceeds
|
||||||
|
* this limit.\n This field only applies to the parallel case. While it is
|
||||||
|
* ignored elsewhere, it can still draw a value out of bounds error.\n It
|
||||||
|
* must be consistent across all caches on any given file.\n By default,
|
||||||
|
* this field is set to 256 KB. It shouldn't be more than half the current
|
||||||
|
* max cache size times the min clean fraction. */
|
||||||
|
|
||||||
|
int metadata_write_strategy;
|
||||||
|
/**< Desired metadata write strategy. The valid values for this field
|
||||||
|
* are:\n #H5AC_METADATA_WRITE_STRATEGY__PROCESS_0_ONLY: Specifies the only
|
||||||
|
* process zero is allowed to write dirty metadata to disk.\n
|
||||||
|
* #H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED: Specifies that process zero
|
||||||
|
* still makes the decisions as to what entries should be flushed, but the
|
||||||
|
* actual flushes are distributed across the processes in the computation to
|
||||||
|
* the extent possible.\n The src/H5ACpublic.h include file in the HDF5
|
||||||
|
* library has detailed information on each strategy. */
|
||||||
|
//! <!-- [H5AC_cache_config_t_parallel_snip] -->
|
||||||
|
} H5AC_cache_config_t;
|
||||||
|
//! <!-- [H5AC_cache_config_t_snip] -->
|
||||||
|
|
||||||
|
#define H5AC__CURR_CACHE_IMAGE_CONFIG_VERSION 1
|
||||||
|
|
||||||
|
#define H5AC__CACHE_IMAGE__ENTRY_AGEOUT__NONE -1
|
||||||
|
#define H5AC__CACHE_IMAGE__ENTRY_AGEOUT__MAX 100
|
||||||
|
|
||||||
|
//! <!-- [H5AC_cache_image_config_t_snip] -->
|
||||||
|
/**
|
||||||
|
* H5AC_cache_image_config_t is a public structure intended for use in public
|
||||||
|
* APIs. At least in its initial incarnation, it is a copy of \c struct \c
|
||||||
|
* H5C_cache_image_ctl_t.
|
||||||
|
*/
|
||||||
|
|
||||||
|
typedef struct H5AC_cache_image_config_t {
|
||||||
|
int version;
|
||||||
|
/**< Integer field containing the version number of this version of the \c
|
||||||
|
* H5C_image_ctl_t structure. Any instance of \c H5C_image_ctl_t passed
|
||||||
|
* to the cache must have a known version number, or an error will be
|
||||||
|
* flagged.
|
||||||
|
*/
|
||||||
|
hbool_t generate_image;
|
||||||
|
/**< Boolean flag indicating whether a cache image should be created on file
|
||||||
|
* close.
|
||||||
|
*/
|
||||||
|
hbool_t save_resize_status;
|
||||||
|
/**< Boolean flag indicating whether the cache image should include the
|
||||||
|
* adaptive cache resize configuration and status. Note that this field
|
||||||
|
* is ignored at present.
|
||||||
|
*/
|
||||||
|
int entry_ageout;
|
||||||
|
/**< Integer field indicating the maximum number of times a
|
||||||
|
* prefetched entry can appear in subsequent cache images. This field
|
||||||
|
* exists to allow the user to avoid the buildup of infrequently used
|
||||||
|
* entries in long sequences of cache images.
|
||||||
|
*
|
||||||
|
* The value of this field must lie in the range \ref
|
||||||
|
* H5AC__CACHE_IMAGE__ENTRY_AGEOUT__NONE (-1) to \ref
|
||||||
|
* H5AC__CACHE_IMAGE__ENTRY_AGEOUT__MAX (100).
|
||||||
|
*
|
||||||
|
* \ref H5AC__CACHE_IMAGE__ENTRY_AGEOUT__NONE means that no limit is
|
||||||
|
* imposed on number of times a prefeteched entry can appear in subsequent
|
||||||
|
* cache images.
|
||||||
|
*
|
||||||
|
* A value of 0 prevents prefetched entries from being included in cache
|
||||||
|
* images.
|
||||||
|
*
|
||||||
|
* Positive integers restrict prefetched entries to the specified number
|
||||||
|
* of appearances.
|
||||||
|
*
|
||||||
|
* Note that the number of subsequent cache images that a prefetched entry
|
||||||
|
* has appeared in is tracked in an 8 bit field. Thus, while \ref
|
||||||
|
* H5AC__CACHE_IMAGE__ENTRY_AGEOUT__MAX can be increased from its current
|
||||||
|
* value, any value in excess of 255 will be the functional equivalent of
|
||||||
|
* \ref H5AC__CACHE_IMAGE__ENTRY_AGEOUT__NONE.
|
||||||
|
*/
|
||||||
|
} H5AC_cache_image_config_t;
|
||||||
|
|
||||||
|
//! <!-- [H5AC_cache_image_config_t_snip] -->
|
||||||
|
|
||||||
|
#ifdef __cplusplus
|
||||||
|
}
|
||||||
|
#endif
|
||||||
|
#endif
|
||||||
|
|
@ -0,0 +1,84 @@
|
||||||
|
// C++ informative line for the emacs editor: -*- C++ -*-
|
||||||
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
|
||||||
|
* Copyright by The HDF Group. *
|
||||||
|
* Copyright by the Board of Trustees of the University of Illinois. *
|
||||||
|
* All rights reserved. *
|
||||||
|
* *
|
||||||
|
* This file is part of HDF5. The full HDF5 copyright notice, including *
|
||||||
|
* terms governing use, modification, and redistribution, is contained in *
|
||||||
|
* the COPYING file, which can be found at the root of the source code *
|
||||||
|
* distribution tree, or in https://www.hdfgroup.org/licenses. *
|
||||||
|
* If you do not have access to either file, you may request a copy from *
|
||||||
|
* help@hdfgroup.org. *
|
||||||
|
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
|
||||||
|
|
||||||
|
#ifndef H5AbstractDs_H
|
||||||
|
#define H5AbstractDs_H
|
||||||
|
|
||||||
|
namespace H5 {
|
||||||
|
|
||||||
|
class ArrayType;
|
||||||
|
class CompType;
|
||||||
|
class EnumType;
|
||||||
|
class FloatType;
|
||||||
|
class IntType;
|
||||||
|
class StrType;
|
||||||
|
class VarLenType;
|
||||||
|
class DataSpace;
|
||||||
|
|
||||||
|
/*! \class AbstractDs
|
||||||
|
\brief AbstractDs is an abstract base class, inherited by Attribute
|
||||||
|
and DataSet.
|
||||||
|
|
||||||
|
It provides a collection of services that are common to both Attribute
|
||||||
|
and DataSet.
|
||||||
|
*/
|
||||||
|
class H5_DLLCPP AbstractDs {
|
||||||
|
public:
|
||||||
|
// Gets a copy the datatype of that this abstract dataset uses.
|
||||||
|
// Note that this datatype is a generic one and can only be accessed
|
||||||
|
// via generic member functions, i.e., member functions belong
|
||||||
|
// to DataType. To get specific datatype, i.e. EnumType, FloatType,
|
||||||
|
// etc..., use the specific functions, that follow, instead.
|
||||||
|
DataType getDataType() const;
|
||||||
|
|
||||||
|
// Gets a copy of the specific datatype of this abstract dataset.
|
||||||
|
ArrayType getArrayType() const;
|
||||||
|
CompType getCompType() const;
|
||||||
|
EnumType getEnumType() const;
|
||||||
|
IntType getIntType() const;
|
||||||
|
FloatType getFloatType() const;
|
||||||
|
StrType getStrType() const;
|
||||||
|
VarLenType getVarLenType() const;
|
||||||
|
|
||||||
|
///\brief Gets the size in memory of this abstract dataset.
|
||||||
|
virtual size_t getInMemDataSize() const = 0;
|
||||||
|
|
||||||
|
///\brief Gets the dataspace of this abstract dataset - pure virtual.
|
||||||
|
virtual DataSpace getSpace() const = 0;
|
||||||
|
|
||||||
|
// Gets the class of the datatype that is used by this abstract
|
||||||
|
// dataset.
|
||||||
|
H5T_class_t getTypeClass() const;
|
||||||
|
|
||||||
|
///\brief Returns the amount of storage size required - pure virtual.
|
||||||
|
virtual hsize_t getStorageSize() const = 0;
|
||||||
|
|
||||||
|
// Returns this class name - pure virtual.
|
||||||
|
virtual H5std_string fromClass() const = 0;
|
||||||
|
|
||||||
|
// Destructor
|
||||||
|
virtual ~AbstractDs();
|
||||||
|
|
||||||
|
protected:
|
||||||
|
// Default constructor
|
||||||
|
AbstractDs();
|
||||||
|
|
||||||
|
private:
|
||||||
|
// This member function is implemented by DataSet and Attribute - pure virtual.
|
||||||
|
virtual hid_t p_get_type() const = 0;
|
||||||
|
|
||||||
|
}; // end of AbstractDs
|
||||||
|
} // namespace H5
|
||||||
|
|
||||||
|
#endif // H5AbstractDs_H
|
||||||
|
|
@ -0,0 +1,27 @@
|
||||||
|
// C++ informative line for the emacs editor: -*- C++ -*-
|
||||||
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
|
||||||
|
* Copyright by The HDF Group. *
|
||||||
|
* Copyright by the Board of Trustees of the University of Illinois. *
|
||||||
|
* All rights reserved. *
|
||||||
|
* *
|
||||||
|
* This file is part of HDF5. The full HDF5 copyright notice, including *
|
||||||
|
* terms governing use, modification, and redistribution, is contained in *
|
||||||
|
* the COPYING file, which can be found at the root of the source code *
|
||||||
|
* distribution tree, or in https://www.hdfgroup.org/licenses. *
|
||||||
|
* If you do not have access to either file, you may request a copy from *
|
||||||
|
* help@hdfgroup.org. *
|
||||||
|
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
|
||||||
|
|
||||||
|
// This header file simply serves as a container to hold the
|
||||||
|
// header files of all datatypes. It simplifies the header
|
||||||
|
// file including in the code.
|
||||||
|
|
||||||
|
#include "H5DataType.h"
|
||||||
|
#include "H5AtomType.h"
|
||||||
|
#include "H5EnumType.h"
|
||||||
|
#include "H5IntType.h"
|
||||||
|
#include "H5FloatType.h"
|
||||||
|
#include "H5StrType.h"
|
||||||
|
#include "H5ArrayType.h"
|
||||||
|
#include "H5VarLenType.h"
|
||||||
|
#include "H5CompType.h"
|
||||||
File diff suppressed because it is too large
Load Diff
|
|
@ -0,0 +1,72 @@
|
||||||
|
// C++ informative line for the emacs editor: -*- C++ -*-
|
||||||
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
|
||||||
|
* Copyright by The HDF Group. *
|
||||||
|
* Copyright by the Board of Trustees of the University of Illinois. *
|
||||||
|
* All rights reserved. *
|
||||||
|
* *
|
||||||
|
* This file is part of HDF5. The full HDF5 copyright notice, including *
|
||||||
|
* terms governing use, modification, and redistribution, is contained in *
|
||||||
|
* the COPYING file, which can be found at the root of the source code *
|
||||||
|
* distribution tree, or in https://www.hdfgroup.org/licenses. *
|
||||||
|
* If you do not have access to either file, you may request a copy from *
|
||||||
|
* help@hdfgroup.org. *
|
||||||
|
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
|
||||||
|
|
||||||
|
#ifndef H5ArrayType_H
|
||||||
|
#define H5ArrayType_H
|
||||||
|
|
||||||
|
namespace H5 {
|
||||||
|
|
||||||
|
/*! \class ArrayType
|
||||||
|
\brief Class ArrayType inherits from DataType and provides wrappers for
|
||||||
|
the HDF5's Array Datatypes.
|
||||||
|
*/
|
||||||
|
// Inheritance: DataType -> H5Object -> H5Location -> IdComponent
|
||||||
|
class H5_DLLCPP ArrayType : public DataType {
|
||||||
|
public:
|
||||||
|
// Constructor that creates a new array data type based on the
|
||||||
|
// specified base type.
|
||||||
|
ArrayType(const DataType &base_type, int ndims, const hsize_t *dims);
|
||||||
|
|
||||||
|
// Assignment operator
|
||||||
|
ArrayType &operator=(const ArrayType &rhs);
|
||||||
|
|
||||||
|
// Constructors that open an array datatype, given a location.
|
||||||
|
ArrayType(const H5Location &loc, const char *name);
|
||||||
|
ArrayType(const H5Location &loc, const H5std_string &name);
|
||||||
|
|
||||||
|
// Returns an ArrayType object via DataType* by decoding the
|
||||||
|
// binary object description of this type.
|
||||||
|
virtual DataType *decode() const override;
|
||||||
|
|
||||||
|
// Returns the number of dimensions of this array datatype.
|
||||||
|
int getArrayNDims() const;
|
||||||
|
// int getArrayNDims(); // removed 1.8.18 and 1.10.1
|
||||||
|
|
||||||
|
// Returns the sizes of dimensions of this array datatype.
|
||||||
|
int getArrayDims(hsize_t *dims) const;
|
||||||
|
// int getArrayDims(hsize_t* dims); // removed 1.8.18 and 1.10.1
|
||||||
|
|
||||||
|
///\brief Returns this class name.
|
||||||
|
virtual H5std_string
|
||||||
|
fromClass() const override
|
||||||
|
{
|
||||||
|
return ("ArrayType");
|
||||||
|
}
|
||||||
|
|
||||||
|
// Copy constructor: same as the original ArrayType.
|
||||||
|
ArrayType(const ArrayType &original);
|
||||||
|
|
||||||
|
// Constructor that takes an existing id
|
||||||
|
ArrayType(const hid_t existing_id);
|
||||||
|
|
||||||
|
// Noop destructor
|
||||||
|
virtual ~ArrayType() override;
|
||||||
|
|
||||||
|
// Default constructor
|
||||||
|
ArrayType();
|
||||||
|
|
||||||
|
}; // end of ArrayType
|
||||||
|
} // namespace H5
|
||||||
|
|
||||||
|
#endif // H5ArrayType_H
|
||||||
|
|
@ -0,0 +1,86 @@
|
||||||
|
// C++ informative line for the emacs editor: -*- C++ -*-
|
||||||
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
|
||||||
|
* Copyright by The HDF Group. *
|
||||||
|
* Copyright by the Board of Trustees of the University of Illinois. *
|
||||||
|
* All rights reserved. *
|
||||||
|
* *
|
||||||
|
* This file is part of HDF5. The full HDF5 copyright notice, including *
|
||||||
|
* terms governing use, modification, and redistribution, is contained in *
|
||||||
|
* the COPYING file, which can be found at the root of the source code *
|
||||||
|
* distribution tree, or in https://www.hdfgroup.org/licenses. *
|
||||||
|
* If you do not have access to either file, you may request a copy from *
|
||||||
|
* help@hdfgroup.org. *
|
||||||
|
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
|
||||||
|
|
||||||
|
#ifndef H5AtomType_H
|
||||||
|
#define H5AtomType_H
|
||||||
|
|
||||||
|
namespace H5 {
|
||||||
|
|
||||||
|
/*! \class AtomType
|
||||||
|
\brief AtomType is a base class, inherited by IntType, FloatType,
|
||||||
|
StrType, and PredType.
|
||||||
|
|
||||||
|
AtomType provides operations on HDF5 atomic datatypes. It also inherits
|
||||||
|
from DataType.
|
||||||
|
*/
|
||||||
|
// Inheritance: DataType -> H5Object -> H5Location -> IdComponent
|
||||||
|
class H5_DLLCPP AtomType : public DataType {
|
||||||
|
public:
|
||||||
|
// Returns the byte order of an atomic datatype.
|
||||||
|
H5T_order_t getOrder() const;
|
||||||
|
H5T_order_t getOrder(H5std_string &order_string) const;
|
||||||
|
|
||||||
|
// Sets the byte ordering of an atomic datatype.
|
||||||
|
void setOrder(H5T_order_t order) const;
|
||||||
|
|
||||||
|
// Retrieves the bit offset of the first significant bit.
|
||||||
|
// 12/05/00 - changed return type to int from size_t - C API
|
||||||
|
int getOffset() const;
|
||||||
|
|
||||||
|
// Sets the bit offset of the first significant bit.
|
||||||
|
void setOffset(size_t offset) const;
|
||||||
|
|
||||||
|
// Retrieves the padding type of the least and most-significant bit padding.
|
||||||
|
void getPad(H5T_pad_t &lsb, H5T_pad_t &msb) const;
|
||||||
|
|
||||||
|
// Sets the least and most-significant bits padding types
|
||||||
|
void setPad(H5T_pad_t lsb, H5T_pad_t msb) const;
|
||||||
|
|
||||||
|
// Returns the precision of an atomic datatype.
|
||||||
|
size_t getPrecision() const;
|
||||||
|
|
||||||
|
// Sets the precision of an atomic datatype.
|
||||||
|
void setPrecision(size_t precision) const;
|
||||||
|
|
||||||
|
// Sets the total size for an atomic datatype.
|
||||||
|
void setSize(size_t size) const;
|
||||||
|
|
||||||
|
///\brief Returns this class name.
|
||||||
|
virtual H5std_string
|
||||||
|
fromClass() const override
|
||||||
|
{
|
||||||
|
return ("AtomType");
|
||||||
|
}
|
||||||
|
|
||||||
|
#ifndef DOXYGEN_SHOULD_SKIP_THIS
|
||||||
|
// Copy constructor: same as the original AtomType.
|
||||||
|
AtomType(const AtomType &original);
|
||||||
|
|
||||||
|
// Noop destructor
|
||||||
|
virtual ~AtomType() override;
|
||||||
|
#endif // DOXYGEN_SHOULD_SKIP_THIS
|
||||||
|
|
||||||
|
protected:
|
||||||
|
#ifndef DOXYGEN_SHOULD_SKIP_THIS
|
||||||
|
// Default constructor
|
||||||
|
AtomType();
|
||||||
|
|
||||||
|
// Constructor that takes an existing id
|
||||||
|
AtomType(const hid_t existing_id);
|
||||||
|
#endif // DOXYGEN_SHOULD_SKIP_THIS
|
||||||
|
|
||||||
|
}; // end of AtomType
|
||||||
|
} // namespace H5
|
||||||
|
|
||||||
|
#endif // H5AtomType_H
|
||||||
|
|
@ -0,0 +1,107 @@
|
||||||
|
// C++ informative line for the emacs editor: -*- C++ -*-
|
||||||
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
|
||||||
|
* Copyright by The HDF Group. *
|
||||||
|
* Copyright by the Board of Trustees of the University of Illinois. *
|
||||||
|
* All rights reserved. *
|
||||||
|
* *
|
||||||
|
* This file is part of HDF5. The full HDF5 copyright notice, including *
|
||||||
|
* terms governing use, modification, and redistribution, is contained in *
|
||||||
|
* the COPYING file, which can be found at the root of the source code *
|
||||||
|
* distribution tree, or in https://www.hdfgroup.org/licenses. *
|
||||||
|
* If you do not have access to either file, you may request a copy from *
|
||||||
|
* help@hdfgroup.org. *
|
||||||
|
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
|
||||||
|
|
||||||
|
#ifndef H5Attribute_H
|
||||||
|
#define H5Attribute_H
|
||||||
|
|
||||||
|
namespace H5 {
|
||||||
|
|
||||||
|
/*! \class Attribute
|
||||||
|
\brief Class Attribute operates on HDF5 attributes.
|
||||||
|
|
||||||
|
An attribute has many characteristics similar to a dataset, thus both
|
||||||
|
Attribute and DataSet are derivatives of AbstractDs. Attribute also
|
||||||
|
inherits from H5Location because an attribute can be used to specify
|
||||||
|
a location.
|
||||||
|
*/
|
||||||
|
// Inheritance: multiple H5Location/AbstractDs -> IdComponent
|
||||||
|
class H5_DLLCPP Attribute : public AbstractDs, public H5Location {
|
||||||
|
public:
|
||||||
|
// Copy constructor: same as the original Attribute.
|
||||||
|
Attribute(const Attribute &original);
|
||||||
|
|
||||||
|
// Default constructor
|
||||||
|
Attribute();
|
||||||
|
|
||||||
|
// Creates a copy of an existing attribute using the attribute id
|
||||||
|
Attribute(const hid_t attr_id);
|
||||||
|
|
||||||
|
// Closes this attribute.
|
||||||
|
virtual void close() override;
|
||||||
|
|
||||||
|
// Gets the name of this attribute.
|
||||||
|
ssize_t getName(char *attr_name, size_t buf_size = 0) const;
|
||||||
|
H5std_string getName(size_t len) const;
|
||||||
|
H5std_string getName() const;
|
||||||
|
ssize_t getName(H5std_string &attr_name, size_t len = 0) const;
|
||||||
|
// The overloaded function below is replaced by the one above and it
|
||||||
|
// is kept for backward compatibility purpose.
|
||||||
|
ssize_t getName(size_t buf_size, H5std_string &attr_name) const;
|
||||||
|
|
||||||
|
// Gets a copy of the dataspace for this attribute.
|
||||||
|
virtual DataSpace getSpace() const override;
|
||||||
|
|
||||||
|
// Returns the amount of storage size required for this attribute.
|
||||||
|
virtual hsize_t getStorageSize() const override;
|
||||||
|
|
||||||
|
// Returns the in memory size of this attribute's data.
|
||||||
|
virtual size_t getInMemDataSize() const override;
|
||||||
|
|
||||||
|
// Reads data from this attribute.
|
||||||
|
void read(const DataType &mem_type, void *buf) const;
|
||||||
|
void read(const DataType &mem_type, H5std_string &strg) const;
|
||||||
|
|
||||||
|
// Writes data to this attribute.
|
||||||
|
void write(const DataType &mem_type, const void *buf) const;
|
||||||
|
void write(const DataType &mem_type, const H5std_string &strg) const;
|
||||||
|
|
||||||
|
///\brief Returns this class name.
|
||||||
|
virtual H5std_string
|
||||||
|
fromClass() const override
|
||||||
|
{
|
||||||
|
return ("Attribute");
|
||||||
|
}
|
||||||
|
|
||||||
|
// Gets the attribute id.
|
||||||
|
virtual hid_t getId() const override;
|
||||||
|
|
||||||
|
// Destructor: properly terminates access to this attribute.
|
||||||
|
virtual ~Attribute() override;
|
||||||
|
|
||||||
|
#ifndef DOXYGEN_SHOULD_SKIP_THIS
|
||||||
|
protected:
|
||||||
|
// Sets the attribute id.
|
||||||
|
virtual void p_setId(const hid_t new_id) override;
|
||||||
|
#endif // DOXYGEN_SHOULD_SKIP_THIS
|
||||||
|
|
||||||
|
private:
|
||||||
|
hid_t id; // HDF5 attribute id
|
||||||
|
|
||||||
|
// This function contains the common code that is used by
|
||||||
|
// getTypeClass and various API functions getXxxType
|
||||||
|
// defined in AbstractDs for generic datatype and specific
|
||||||
|
// sub-types
|
||||||
|
virtual hid_t p_get_type() const override;
|
||||||
|
|
||||||
|
// Reads variable or fixed len strings from this attribute.
|
||||||
|
void p_read_variable_len(const DataType &mem_type, H5std_string &strg) const;
|
||||||
|
void p_read_fixed_len(const DataType &mem_type, H5std_string &strg) const;
|
||||||
|
|
||||||
|
// Friend function to set Attribute id. For library use only.
|
||||||
|
friend void f_Attribute_setId(Attribute *attr, hid_t new_id);
|
||||||
|
|
||||||
|
}; // end of Attribute
|
||||||
|
} // namespace H5
|
||||||
|
|
||||||
|
#endif // H5Attribute_H
|
||||||
|
|
@ -0,0 +1,46 @@
|
||||||
|
// C++ informative line for the emacs editor: -*- C++ -*-
|
||||||
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
|
||||||
|
* Copyright by The HDF Group. *
|
||||||
|
* Copyright by the Board of Trustees of the University of Illinois. *
|
||||||
|
* All rights reserved. *
|
||||||
|
* *
|
||||||
|
* This file is part of HDF5. The full HDF5 copyright notice, including *
|
||||||
|
* terms governing use, modification, and redistribution, is contained in *
|
||||||
|
* the COPYING file, which can be found at the root of the source code *
|
||||||
|
* distribution tree, or in https://www.hdfgroup.org/licenses. *
|
||||||
|
* If you do not have access to either file, you may request a copy from *
|
||||||
|
* help@hdfgroup.org. *
|
||||||
|
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
|
||||||
|
|
||||||
|
#ifndef H5Classes_H
|
||||||
|
#define H5Classes_H
|
||||||
|
|
||||||
|
namespace H5 {
|
||||||
|
class Exception;
|
||||||
|
class IdComponent;
|
||||||
|
class H5Location;
|
||||||
|
class H5Object;
|
||||||
|
class PropList;
|
||||||
|
class FileCreatPropList;
|
||||||
|
class FileAccPropList;
|
||||||
|
class LinkAccPropList;
|
||||||
|
class DSetCreatPropList;
|
||||||
|
class DSetMemXferPropList;
|
||||||
|
class DTypePropList;
|
||||||
|
class DataType;
|
||||||
|
class DataSpace;
|
||||||
|
class AtomType;
|
||||||
|
class PredType;
|
||||||
|
class IntType;
|
||||||
|
class FloatType;
|
||||||
|
class StrType;
|
||||||
|
class EnumType;
|
||||||
|
class CompType;
|
||||||
|
class AbstractDs;
|
||||||
|
class DataSet;
|
||||||
|
class Group;
|
||||||
|
class H5File;
|
||||||
|
class Attribute;
|
||||||
|
class H5Library;
|
||||||
|
} // namespace H5
|
||||||
|
#endif // H5Classes_H
|
||||||
|
|
@ -0,0 +1,96 @@
|
||||||
|
// C++ informative line for the emacs editor: -*- C++ -*-
|
||||||
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
|
||||||
|
* Copyright by The HDF Group. *
|
||||||
|
* Copyright by the Board of Trustees of the University of Illinois. *
|
||||||
|
* All rights reserved. *
|
||||||
|
* *
|
||||||
|
* This file is part of HDF5. The full HDF5 copyright notice, including *
|
||||||
|
* terms governing use, modification, and redistribution, is contained in *
|
||||||
|
* the COPYING file, which can be found at the root of the source code *
|
||||||
|
* distribution tree, or in https://www.hdfgroup.org/licenses. *
|
||||||
|
* If you do not have access to either file, you may request a copy from *
|
||||||
|
* help@hdfgroup.org. *
|
||||||
|
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
|
||||||
|
|
||||||
|
#ifndef H5CommonFG_H
|
||||||
|
#define H5CommonFG_H
|
||||||
|
|
||||||
|
namespace H5 {
|
||||||
|
|
||||||
|
// Class forwarding
|
||||||
|
class Group;
|
||||||
|
class H5File;
|
||||||
|
class ArrayType;
|
||||||
|
class VarLenType;
|
||||||
|
|
||||||
|
/*! \class CommonFG
|
||||||
|
\brief \a CommonFG is an abstract base class of H5Group.
|
||||||
|
*/
|
||||||
|
/* Note: This class is being deprecated gradually. */
|
||||||
|
class H5_DLLCPP CommonFG {
|
||||||
|
public:
|
||||||
|
// Opens a generic named datatype in this location.
|
||||||
|
DataType openDataType(const char *name) const;
|
||||||
|
DataType openDataType(const H5std_string &name) const;
|
||||||
|
|
||||||
|
// Opens a named array datatype in this location.
|
||||||
|
ArrayType openArrayType(const char *name) const;
|
||||||
|
ArrayType openArrayType(const H5std_string &name) const;
|
||||||
|
|
||||||
|
// Opens a named compound datatype in this location.
|
||||||
|
CompType openCompType(const char *name) const;
|
||||||
|
CompType openCompType(const H5std_string &name) const;
|
||||||
|
|
||||||
|
// Opens a named enumeration datatype in this location.
|
||||||
|
EnumType openEnumType(const char *name) const;
|
||||||
|
EnumType openEnumType(const H5std_string &name) const;
|
||||||
|
|
||||||
|
// Opens a named integer datatype in this location.
|
||||||
|
IntType openIntType(const char *name) const;
|
||||||
|
IntType openIntType(const H5std_string &name) const;
|
||||||
|
|
||||||
|
// Opens a named floating-point datatype in this location.
|
||||||
|
FloatType openFloatType(const char *name) const;
|
||||||
|
FloatType openFloatType(const H5std_string &name) const;
|
||||||
|
|
||||||
|
// Opens a named string datatype in this location.
|
||||||
|
StrType openStrType(const char *name) const;
|
||||||
|
StrType openStrType(const H5std_string &name) const;
|
||||||
|
|
||||||
|
// Opens a named variable length datatype in this location.
|
||||||
|
VarLenType openVarLenType(const char *name) const;
|
||||||
|
VarLenType openVarLenType(const H5std_string &name) const;
|
||||||
|
|
||||||
|
#ifndef DOXYGEN_SHOULD_SKIP_THIS
|
||||||
|
/// For subclasses, H5File and Group, to return the correct
|
||||||
|
/// object id, i.e. file or group id.
|
||||||
|
virtual hid_t getLocId() const = 0;
|
||||||
|
|
||||||
|
/// For subclasses, H5File and Group, to throw appropriate exception.
|
||||||
|
virtual void throwException(const H5std_string &func_name, const H5std_string &msg) const = 0;
|
||||||
|
|
||||||
|
// Default constructor.
|
||||||
|
CommonFG();
|
||||||
|
|
||||||
|
// Noop destructor.
|
||||||
|
virtual ~CommonFG();
|
||||||
|
|
||||||
|
protected:
|
||||||
|
virtual void p_setId(const hid_t new_id) = 0;
|
||||||
|
|
||||||
|
#endif // DOXYGEN_SHOULD_SKIP_THIS
|
||||||
|
|
||||||
|
}; // end of CommonFG
|
||||||
|
} // namespace H5
|
||||||
|
|
||||||
|
#endif // H5CommonFG_H
|
||||||
|
|
||||||
|
/***************************************************************************
|
||||||
|
Design Note
|
||||||
|
===========
|
||||||
|
|
||||||
|
September 2017:
|
||||||
|
|
||||||
|
This class used to be base class of H5File as well, until the
|
||||||
|
restructure that moved H5File to be subclass of H5Group.
|
||||||
|
*/
|
||||||
|
|
@ -0,0 +1,127 @@
|
||||||
|
// C++ informative line for the emacs editor: -*- C++ -*-
|
||||||
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
|
||||||
|
* Copyright by The HDF Group. *
|
||||||
|
* Copyright by the Board of Trustees of the University of Illinois. *
|
||||||
|
* All rights reserved. *
|
||||||
|
* *
|
||||||
|
* This file is part of HDF5. The full HDF5 copyright notice, including *
|
||||||
|
* terms governing use, modification, and redistribution, is contained in *
|
||||||
|
* the COPYING file, which can be found at the root of the source code *
|
||||||
|
* distribution tree, or in https://www.hdfgroup.org/licenses. *
|
||||||
|
* If you do not have access to either file, you may request a copy from *
|
||||||
|
* help@hdfgroup.org. *
|
||||||
|
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
|
||||||
|
|
||||||
|
#ifndef H5CompType_H
|
||||||
|
#define H5CompType_H
|
||||||
|
|
||||||
|
namespace H5 {
|
||||||
|
|
||||||
|
/*! \class CompType
|
||||||
|
\brief CompType is a derivative of a DataType and operates on HDF5
|
||||||
|
compound datatypes.
|
||||||
|
*/
|
||||||
|
// Inheritance: DataType -> H5Object -> H5Location -> IdComponent
|
||||||
|
class H5_DLLCPP CompType : public DataType {
|
||||||
|
public:
|
||||||
|
// Default constructor
|
||||||
|
CompType();
|
||||||
|
|
||||||
|
// Creates a compound datatype using an existing id
|
||||||
|
CompType(const hid_t existing_id);
|
||||||
|
|
||||||
|
// Creates a new compound datatype, given the type's size
|
||||||
|
CompType(size_t size); // H5Tcreate
|
||||||
|
|
||||||
|
// Gets the compound datatype of the specified dataset
|
||||||
|
CompType(const DataSet &dataset); // H5Dget_type
|
||||||
|
|
||||||
|
// Copy constructor - same as the original CompType.
|
||||||
|
CompType(const CompType &original);
|
||||||
|
|
||||||
|
// Constructors that open a compound datatype, given a location.
|
||||||
|
CompType(const H5Location &loc, const char *name);
|
||||||
|
CompType(const H5Location &loc, const H5std_string &name);
|
||||||
|
|
||||||
|
// Returns a CompType object via DataType* by decoding the binary
|
||||||
|
// object description of this type.
|
||||||
|
virtual DataType *decode() const override;
|
||||||
|
|
||||||
|
// Returns the type class of the specified member of this compound
|
||||||
|
// datatype. It provides to the user a way of knowing what type
|
||||||
|
// to create another datatype of the same class
|
||||||
|
H5T_class_t getMemberClass(unsigned member_num) const;
|
||||||
|
|
||||||
|
// Returns the index of a member in this compound data type.
|
||||||
|
int getMemberIndex(const char *name) const;
|
||||||
|
int getMemberIndex(const H5std_string &name) const;
|
||||||
|
|
||||||
|
// Returns the offset of a member of this compound datatype.
|
||||||
|
size_t getMemberOffset(unsigned memb_no) const;
|
||||||
|
|
||||||
|
// Returns the name of a member of this compound datatype.
|
||||||
|
H5std_string getMemberName(unsigned member_num) const;
|
||||||
|
|
||||||
|
// Returns the generic datatype of the specified member in
|
||||||
|
// this compound datatype.
|
||||||
|
DataType getMemberDataType(unsigned member_num) const;
|
||||||
|
|
||||||
|
// Returns the array datatype of the specified member in
|
||||||
|
// this compound datatype.
|
||||||
|
ArrayType getMemberArrayType(unsigned member_num) const;
|
||||||
|
|
||||||
|
// Returns the compound datatype of the specified member in
|
||||||
|
// this compound datatype.
|
||||||
|
CompType getMemberCompType(unsigned member_num) const;
|
||||||
|
|
||||||
|
// Returns the enumeration datatype of the specified member in
|
||||||
|
// this compound datatype.
|
||||||
|
EnumType getMemberEnumType(unsigned member_num) const;
|
||||||
|
|
||||||
|
// Returns the integer datatype of the specified member in
|
||||||
|
// this compound datatype.
|
||||||
|
IntType getMemberIntType(unsigned member_num) const;
|
||||||
|
|
||||||
|
// Returns the floating-point datatype of the specified member in
|
||||||
|
// this compound datatype.
|
||||||
|
FloatType getMemberFloatType(unsigned member_num) const;
|
||||||
|
|
||||||
|
// Returns the string datatype of the specified member in
|
||||||
|
// this compound datatype.
|
||||||
|
StrType getMemberStrType(unsigned member_num) const;
|
||||||
|
|
||||||
|
// Returns the variable length datatype of the specified member in
|
||||||
|
// this compound datatype.
|
||||||
|
VarLenType getMemberVarLenType(unsigned member_num) const;
|
||||||
|
|
||||||
|
// Returns the number of members in this compound datatype.
|
||||||
|
int getNmembers() const;
|
||||||
|
|
||||||
|
// Adds a new member to this compound datatype.
|
||||||
|
void insertMember(const H5std_string &name, size_t offset, const DataType &new_member) const;
|
||||||
|
|
||||||
|
// Recursively removes padding from within this compound datatype.
|
||||||
|
void pack() const;
|
||||||
|
|
||||||
|
// Sets the total size for this compound datatype.
|
||||||
|
void setSize(size_t size) const;
|
||||||
|
|
||||||
|
///\brief Returns this class name.
|
||||||
|
virtual H5std_string
|
||||||
|
fromClass() const override
|
||||||
|
{
|
||||||
|
return ("CompType");
|
||||||
|
}
|
||||||
|
|
||||||
|
// Noop destructor.
|
||||||
|
virtual ~CompType() override;
|
||||||
|
|
||||||
|
private:
|
||||||
|
// Contains common code that is used by the member functions
|
||||||
|
// getMemberXxxType
|
||||||
|
hid_t p_get_member_type(unsigned member_num) const;
|
||||||
|
|
||||||
|
}; // end of CompType
|
||||||
|
} // namespace H5
|
||||||
|
|
||||||
|
#endif // H5CompType_H
|
||||||
|
|
@ -0,0 +1,51 @@
|
||||||
|
// C++ informative line for the emacs editor: -*- C++ -*-
|
||||||
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
|
||||||
|
* Copyright by The HDF Group. *
|
||||||
|
* Copyright by the Board of Trustees of the University of Illinois. *
|
||||||
|
* All rights reserved. *
|
||||||
|
* *
|
||||||
|
* This file is part of HDF5. The full HDF5 copyright notice, including *
|
||||||
|
* terms governing use, modification, and redistribution, is contained in *
|
||||||
|
* the COPYING file, which can be found at the root of the source code *
|
||||||
|
* distribution tree, or in https://www.hdfgroup.org/licenses. *
|
||||||
|
* If you do not have access to either file, you may request a copy from *
|
||||||
|
* help@hdfgroup.org. *
|
||||||
|
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
|
||||||
|
|
||||||
|
#ifndef H5Cpp_H
|
||||||
|
#define H5Cpp_H
|
||||||
|
|
||||||
|
#include "H5Include.h"
|
||||||
|
#include "H5Exception.h"
|
||||||
|
#include "H5IdComponent.h"
|
||||||
|
#include "H5DataSpace.h"
|
||||||
|
#include "H5PropList.h"
|
||||||
|
#include "H5FaccProp.h"
|
||||||
|
#include "H5FcreatProp.h"
|
||||||
|
#include "H5OcreatProp.h"
|
||||||
|
#include "H5DcreatProp.h"
|
||||||
|
#include "H5DxferProp.h"
|
||||||
|
#include "H5LcreatProp.h"
|
||||||
|
#include "H5LaccProp.h"
|
||||||
|
#include "H5DaccProp.h"
|
||||||
|
#include "H5Location.h"
|
||||||
|
#include "H5Object.h"
|
||||||
|
#include "H5AbstractDs.h"
|
||||||
|
#include "H5Attribute.h"
|
||||||
|
#include "H5DataType.h"
|
||||||
|
#include "H5AtomType.h"
|
||||||
|
#include "H5PredType.h"
|
||||||
|
#include "H5EnumType.h"
|
||||||
|
#include "H5IntType.h"
|
||||||
|
#include "H5FloatType.h"
|
||||||
|
#include "H5StrType.h"
|
||||||
|
#include "H5CompType.h"
|
||||||
|
#include "H5ArrayType.h"
|
||||||
|
#include "H5VarLenType.h"
|
||||||
|
#include "H5DataSet.h"
|
||||||
|
#include "H5CommonFG.h"
|
||||||
|
#include "H5Group.h"
|
||||||
|
#include "H5File.h"
|
||||||
|
#include "H5Library.h"
|
||||||
|
|
||||||
|
#endif // H5Cpp_H
|
||||||
|
|
@ -0,0 +1,95 @@
|
||||||
|
// C++ informative line for the emacs editor: -*- C++ -*-
|
||||||
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
|
||||||
|
* Copyright by The HDF Group. *
|
||||||
|
* Copyright by the Board of Trustees of the University of Illinois. *
|
||||||
|
* All rights reserved. *
|
||||||
|
* *
|
||||||
|
* This file is part of HDF5. The full HDF5 copyright notice, including *
|
||||||
|
* terms governing use, modification, and redistribution, is contained in *
|
||||||
|
* the COPYING file, which can be found at the root of the source code *
|
||||||
|
* distribution tree, or in https://www.hdfgroup.org/licenses. *
|
||||||
|
* If you do not have access to either file, you may request a copy from *
|
||||||
|
* help@hdfgroup.org. *
|
||||||
|
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
|
||||||
|
|
||||||
|
#ifndef H5CppDoc_H
|
||||||
|
#define H5CppDoc_H
|
||||||
|
|
||||||
|
//-------------------------------------------------------------------------
|
||||||
|
// The following section will be used to generate the 'Mainpage'
|
||||||
|
// and the 'Examples' for the RM.
|
||||||
|
// ------------------------------------------------------------------------
|
||||||
|
|
||||||
|
/*! \mainpage notitle
|
||||||
|
* <br />
|
||||||
|
* \section intro_sec Introduction
|
||||||
|
*
|
||||||
|
* The C++ API provides C++ wrappers for the HDF5 C Library.
|
||||||
|
*
|
||||||
|
* It is assumed that the user has knowledge of the HDF5 file format and its
|
||||||
|
* components. For more information on the HDF5 C Library, please refer to
|
||||||
|
* the HDF5 Software Documentation page.
|
||||||
|
*
|
||||||
|
* Because the HDF5 C Library maps very well to
|
||||||
|
* the object oriented design approach, classes in the C++ API can
|
||||||
|
* closely represent the interfaces of the C APIs as follows:
|
||||||
|
*
|
||||||
|
* \verbatim
|
||||||
|
HDF5 C APIs C++ Classes
|
||||||
|
----------- -----------
|
||||||
|
Attribute Interface (H5A) Attribute
|
||||||
|
Datasets Interface (H5D) DataSet
|
||||||
|
Error Interface (H5E) Exception
|
||||||
|
File Interface (H5F) H5File
|
||||||
|
Group Interface (H5G) Group
|
||||||
|
Identifier Interface (H5I) IdComponent
|
||||||
|
Property List Interface (H5P) PropList and subclasses
|
||||||
|
Dataspace Interface (H5S) DataSpace
|
||||||
|
Datatype Interface (H5T) DataType and subclasses
|
||||||
|
\endverbatim
|
||||||
|
*
|
||||||
|
* This <a href="./C2Cppfunction_map.htm">
|
||||||
|
* table </a> provides a map from the C APIs to the C++ member functions.
|
||||||
|
* <br />
|
||||||
|
* \section install_sec Installation
|
||||||
|
*
|
||||||
|
* The HDF5 C++ API is included with the HDF5 source code.
|
||||||
|
*
|
||||||
|
* Please refer to the release_docs/INSTALL file under the top directory
|
||||||
|
* of the HDF5 source code for information about installing, building,
|
||||||
|
* and testing the C++ API.
|
||||||
|
*
|
||||||
|
* <br />
|
||||||
|
*/
|
||||||
|
|
||||||
|
/// This example shows how to create datasets.
|
||||||
|
///\par
|
||||||
|
///\example create.cpp
|
||||||
|
|
||||||
|
///\par
|
||||||
|
/// This example shows how to write datasets.
|
||||||
|
///\example writedata.cpp
|
||||||
|
|
||||||
|
///\par
|
||||||
|
/// This example shows how to read datasets.
|
||||||
|
///\example readdata.cpp
|
||||||
|
|
||||||
|
///\par
|
||||||
|
/// This example shows how to create a compound datatype,
|
||||||
|
/// write an array which has the compound datatype to the file,
|
||||||
|
/// and read back fields' subsets.
|
||||||
|
///\example compound.cpp
|
||||||
|
|
||||||
|
///\par
|
||||||
|
/// This example shows how to work with extendible datasets.
|
||||||
|
///\example extend_ds.cpp
|
||||||
|
|
||||||
|
///\par
|
||||||
|
/// This example shows how to read data from a chunked dataset.
|
||||||
|
///\example chunks.cpp
|
||||||
|
|
||||||
|
///\par
|
||||||
|
/// This example shows how to work with groups.
|
||||||
|
///\example h5group.cpp
|
||||||
|
|
||||||
|
#endif // H5CppDoc_H
|
||||||
|
|
@ -0,0 +1,67 @@
|
||||||
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
|
||||||
|
* Copyright by The HDF Group. *
|
||||||
|
* Copyright by the Board of Trustees of the University of Illinois. *
|
||||||
|
* All rights reserved. *
|
||||||
|
* *
|
||||||
|
* This file is part of HDF5. The full HDF5 copyright notice, including *
|
||||||
|
* terms governing use, modification, and redistribution, is contained in *
|
||||||
|
* the COPYING file, which can be found at the root of the source code *
|
||||||
|
* distribution tree, or in https://www.hdfgroup.org/licenses. *
|
||||||
|
* If you do not have access to either file, you may request a copy from *
|
||||||
|
* help@hdfgroup.org. *
|
||||||
|
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
|
||||||
|
|
||||||
|
/*-------------------------------------------------------------------------
|
||||||
|
*
|
||||||
|
* Created: H5Cpublic.h
|
||||||
|
* June 4, 2005
|
||||||
|
* John Mainzer
|
||||||
|
*
|
||||||
|
* Purpose: Public include file for cache functions.
|
||||||
|
*
|
||||||
|
*-------------------------------------------------------------------------
|
||||||
|
*/
|
||||||
|
#ifndef H5Cpublic_H
|
||||||
|
#define H5Cpublic_H
|
||||||
|
|
||||||
|
/* Public headers needed by this file */
|
||||||
|
#include "H5public.h"
|
||||||
|
|
||||||
|
#ifdef __cplusplus
|
||||||
|
extern "C" {
|
||||||
|
#endif
|
||||||
|
|
||||||
|
enum H5C_cache_incr_mode {
|
||||||
|
H5C_incr__off,
|
||||||
|
/**<Automatic cache size increase is disabled, and the remaining increment fields are ignored.*/
|
||||||
|
|
||||||
|
H5C_incr__threshold
|
||||||
|
/**<Automatic cache size increase is enabled using the hit rate threshold algorithm.*/
|
||||||
|
};
|
||||||
|
|
||||||
|
enum H5C_cache_flash_incr_mode {
|
||||||
|
H5C_flash_incr__off,
|
||||||
|
/**<Flash cache size increase is disabled.*/
|
||||||
|
|
||||||
|
H5C_flash_incr__add_space
|
||||||
|
/**<Flash cache size increase is enabled using the add space algorithm.*/
|
||||||
|
};
|
||||||
|
|
||||||
|
enum H5C_cache_decr_mode {
|
||||||
|
H5C_decr__off,
|
||||||
|
/**<Automatic cache size decrease is disabled.*/
|
||||||
|
|
||||||
|
H5C_decr__threshold,
|
||||||
|
/**<Automatic cache size decrease is enabled using the hit rate threshold algorithm.*/
|
||||||
|
|
||||||
|
H5C_decr__age_out,
|
||||||
|
/**<Automatic cache size decrease is enabled using the ageout algorithm. */
|
||||||
|
|
||||||
|
H5C_decr__age_out_with_threshold
|
||||||
|
/**<Automatic cache size decrease is enabled using the ageout with hit rate threshold algorithm.*/
|
||||||
|
};
|
||||||
|
|
||||||
|
#ifdef __cplusplus
|
||||||
|
}
|
||||||
|
#endif
|
||||||
|
#endif
|
||||||
|
|
@ -0,0 +1,49 @@
|
||||||
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
|
||||||
|
* Copyright by The HDF Group. *
|
||||||
|
* Copyright by the Board of Trustees of the University of Illinois. *
|
||||||
|
* All rights reserved. *
|
||||||
|
* *
|
||||||
|
* This file is part of HDF5. The full HDF5 copyright notice, including *
|
||||||
|
* terms governing use, modification, and redistribution, is contained in *
|
||||||
|
* the COPYING file, which can be found at the root of the source code *
|
||||||
|
* distribution tree, or in https://www.hdfgroup.org/licenses. *
|
||||||
|
* If you do not have access to either file, you may request a copy from *
|
||||||
|
* help@hdfgroup.org. *
|
||||||
|
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
|
||||||
|
|
||||||
|
#ifndef H5DOpublic_H
|
||||||
|
#define H5DOpublic_H
|
||||||
|
|
||||||
|
#ifdef __cplusplus
|
||||||
|
extern "C" {
|
||||||
|
#endif
|
||||||
|
|
||||||
|
/*-------------------------------------------------------------------------
|
||||||
|
*
|
||||||
|
* "Optimized dataset" routines.
|
||||||
|
*
|
||||||
|
*-------------------------------------------------------------------------
|
||||||
|
*/
|
||||||
|
|
||||||
|
H5_HLDLL herr_t H5DOappend(hid_t dset_id, hid_t dxpl_id, unsigned axis, size_t extension, hid_t memtype,
|
||||||
|
const void *buf);
|
||||||
|
|
||||||
|
/* Symbols defined for compatibility with previous versions of the HDF5 API.
|
||||||
|
*
|
||||||
|
* Use of these symbols is deprecated.
|
||||||
|
*/
|
||||||
|
#ifndef H5_NO_DEPRECATED_SYMBOLS
|
||||||
|
|
||||||
|
/* Compatibility wrappers for functionality moved to H5D */
|
||||||
|
H5_HLDLL herr_t H5DOwrite_chunk(hid_t dset_id, hid_t dxpl_id, uint32_t filters, const hsize_t *offset,
|
||||||
|
size_t data_size, const void *buf);
|
||||||
|
H5_HLDLL herr_t H5DOread_chunk(hid_t dset_id, hid_t dxpl_id, const hsize_t *offset, uint32_t *filters /*out*/,
|
||||||
|
void *buf /*out*/);
|
||||||
|
|
||||||
|
#endif /* H5_NO_DEPRECATED_SYMBOLS */
|
||||||
|
|
||||||
|
#ifdef __cplusplus
|
||||||
|
}
|
||||||
|
#endif
|
||||||
|
|
||||||
|
#endif
|
||||||
|
|
@ -0,0 +1,55 @@
|
||||||
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
|
||||||
|
* Copyright by The HDF Group. *
|
||||||
|
* Copyright by the Board of Trustees of the University of Illinois. *
|
||||||
|
* All rights reserved. *
|
||||||
|
* *
|
||||||
|
* This file is part of HDF5. The full HDF5 copyright notice, including *
|
||||||
|
* terms governing use, modification, and redistribution, is contained in *
|
||||||
|
* the COPYING file, which can be found at the root of the source code *
|
||||||
|
* distribution tree, or in https://www.hdfgroup.org/licenses. *
|
||||||
|
* If you do not have access to either file, you may request a copy from *
|
||||||
|
* help@hdfgroup.org. *
|
||||||
|
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
|
||||||
|
|
||||||
|
#ifndef H5DSpublic_H
|
||||||
|
#define H5DSpublic_H
|
||||||
|
|
||||||
|
#define DIMENSION_SCALE_CLASS "DIMENSION_SCALE"
|
||||||
|
#define DIMENSION_LIST "DIMENSION_LIST"
|
||||||
|
#define REFERENCE_LIST "REFERENCE_LIST"
|
||||||
|
#define DIMENSION_LABELS "DIMENSION_LABELS"
|
||||||
|
|
||||||
|
typedef herr_t (*H5DS_iterate_t)(hid_t dset, unsigned dim, hid_t scale, void *visitor_data);
|
||||||
|
|
||||||
|
#ifdef __cplusplus
|
||||||
|
extern "C" {
|
||||||
|
#endif
|
||||||
|
|
||||||
|
H5_HLDLL herr_t H5DSwith_new_ref(hid_t obj_id, hbool_t *with_new_ref);
|
||||||
|
|
||||||
|
H5_HLDLL herr_t H5DSattach_scale(hid_t did, hid_t dsid, unsigned int idx);
|
||||||
|
|
||||||
|
H5_HLDLL herr_t H5DSdetach_scale(hid_t did, hid_t dsid, unsigned int idx);
|
||||||
|
|
||||||
|
H5_HLDLL herr_t H5DSset_scale(hid_t dsid, const char *dimname);
|
||||||
|
|
||||||
|
H5_HLDLL int H5DSget_num_scales(hid_t did, unsigned int dim);
|
||||||
|
|
||||||
|
H5_HLDLL herr_t H5DSset_label(hid_t did, unsigned int idx, const char *label);
|
||||||
|
|
||||||
|
H5_HLDLL ssize_t H5DSget_label(hid_t did, unsigned int idx, char *label, size_t size);
|
||||||
|
|
||||||
|
H5_HLDLL ssize_t H5DSget_scale_name(hid_t did, char *name, size_t size);
|
||||||
|
|
||||||
|
H5_HLDLL htri_t H5DSis_scale(hid_t did);
|
||||||
|
|
||||||
|
H5_HLDLL herr_t H5DSiterate_scales(hid_t did, unsigned int dim, int *idx, H5DS_iterate_t visitor,
|
||||||
|
void *visitor_data);
|
||||||
|
|
||||||
|
H5_HLDLL htri_t H5DSis_attached(hid_t did, hid_t dsid, unsigned int idx);
|
||||||
|
|
||||||
|
#ifdef __cplusplus
|
||||||
|
}
|
||||||
|
#endif
|
||||||
|
|
||||||
|
#endif
|
||||||
|
|
@ -0,0 +1,72 @@
|
||||||
|
// C++ informative line for the emacs editor: -*- C++ -*-
|
||||||
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
|
||||||
|
* Copyright by The HDF Group. *
|
||||||
|
* Copyright by the Board of Trustees of the University of Illinois. *
|
||||||
|
* All rights reserved. *
|
||||||
|
* *
|
||||||
|
* This file is part of HDF5. The full HDF5 copyright notice, including *
|
||||||
|
* terms governing use, modification, and redistribution, is contained in *
|
||||||
|
* the COPYING file, which can be found at the root of the source code *
|
||||||
|
* distribution tree, or in https://www.hdfgroup.org/licenses. *
|
||||||
|
* If you do not have access to either file, you may request a copy from *
|
||||||
|
* help@hdfgroup.org. *
|
||||||
|
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
|
||||||
|
|
||||||
|
#ifndef H5DSetAccPropList_H
|
||||||
|
#define H5DSetAccPropList_H
|
||||||
|
|
||||||
|
namespace H5 {
|
||||||
|
|
||||||
|
/*! \class DSetAccPropList
|
||||||
|
\brief Class DSetAccPropList inherits from LinkAccPropList and provides
|
||||||
|
wrappers for the HDF5 dataset access property functions.
|
||||||
|
*/
|
||||||
|
// Inheritance: LinkAccPropList -> PropList -> IdComponent
|
||||||
|
class H5_DLLCPP DSetAccPropList : public LinkAccPropList {
|
||||||
|
public:
|
||||||
|
///\brief Default dataset creation property list.
|
||||||
|
static const DSetAccPropList &DEFAULT;
|
||||||
|
|
||||||
|
// Creates a dataset creation property list.
|
||||||
|
DSetAccPropList();
|
||||||
|
|
||||||
|
// Sets the raw data chunk cache parameters.
|
||||||
|
void setChunkCache(size_t rdcc_nslots, size_t rdcc_nbytes, double rdcc_w0) const;
|
||||||
|
|
||||||
|
// Retrieves the raw data chunk cache parameters.
|
||||||
|
void getChunkCache(size_t &rdcc_nslots, size_t &rdcc_nbytes, double &rdcc_w0) const;
|
||||||
|
|
||||||
|
///\brief Returns this class name.
|
||||||
|
virtual H5std_string
|
||||||
|
fromClass() const override
|
||||||
|
{
|
||||||
|
return ("DSetAccPropList");
|
||||||
|
}
|
||||||
|
|
||||||
|
// Copy constructor - same as the original DSetAccPropList.
|
||||||
|
DSetAccPropList(const DSetAccPropList &orig);
|
||||||
|
|
||||||
|
// Creates a copy of an existing dataset creation property list
|
||||||
|
// using the property list id.
|
||||||
|
DSetAccPropList(const hid_t plist_id);
|
||||||
|
|
||||||
|
// Noop destructor.
|
||||||
|
virtual ~DSetAccPropList() override;
|
||||||
|
|
||||||
|
#ifndef DOXYGEN_SHOULD_SKIP_THIS
|
||||||
|
|
||||||
|
// Deletes the global constant, should only be used by the library
|
||||||
|
static void deleteConstants();
|
||||||
|
|
||||||
|
private:
|
||||||
|
static DSetAccPropList *DEFAULT_;
|
||||||
|
|
||||||
|
// Creates the global constant, should only be used by the library
|
||||||
|
static DSetAccPropList *getConstant();
|
||||||
|
|
||||||
|
#endif // DOXYGEN_SHOULD_SKIP_THIS
|
||||||
|
|
||||||
|
}; // end of DSetAccPropList
|
||||||
|
} // namespace H5
|
||||||
|
|
||||||
|
#endif // H5DSetAccPropList_H
|
||||||
|
|
@ -0,0 +1,159 @@
|
||||||
|
// C++ informative line for the emacs editor: -*- C++ -*-
|
||||||
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
|
||||||
|
* Copyright by The HDF Group. *
|
||||||
|
* Copyright by the Board of Trustees of the University of Illinois. *
|
||||||
|
* All rights reserved. *
|
||||||
|
* *
|
||||||
|
* This file is part of HDF5. The full HDF5 copyright notice, including *
|
||||||
|
* terms governing use, modification, and redistribution, is contained in *
|
||||||
|
* the COPYING file, which can be found at the root of the source code *
|
||||||
|
* distribution tree, or in https://www.hdfgroup.org/licenses. *
|
||||||
|
* If you do not have access to either file, you may request a copy from *
|
||||||
|
* help@hdfgroup.org. *
|
||||||
|
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
|
||||||
|
|
||||||
|
#ifndef H5DataSet_H
|
||||||
|
#define H5DataSet_H
|
||||||
|
|
||||||
|
namespace H5 {
|
||||||
|
|
||||||
|
/*! \class DataSet
|
||||||
|
\brief Class DataSet operates on HDF5 datasets.
|
||||||
|
|
||||||
|
An datasets has many characteristics similar to an attribute, thus both
|
||||||
|
Attribute and DataSet are derivatives of AbstractDs. DataSet also
|
||||||
|
inherits from H5Object because a dataset is an HDF5 object.
|
||||||
|
*/
|
||||||
|
// Inheritance: multiple H5Object/AbstractDs -> H5Location -> IdComponent
|
||||||
|
class H5_DLLCPP DataSet : public H5Object, public AbstractDs {
|
||||||
|
public:
|
||||||
|
// Close this dataset.
|
||||||
|
virtual void close() override;
|
||||||
|
|
||||||
|
// Extends the dataset with unlimited dimension.
|
||||||
|
void extend(const hsize_t *size) const;
|
||||||
|
|
||||||
|
// Fills a selection in memory with a value
|
||||||
|
void fillMemBuf(const void *fill, const DataType &fill_type, void *buf, const DataType &buf_type,
|
||||||
|
const DataSpace &space) const;
|
||||||
|
// void fillMemBuf(const void *fill, DataType& fill_type, void *buf, DataType& buf_type, DataSpace&
|
||||||
|
// space); // removed from 1.8.18 and 1.10.1
|
||||||
|
|
||||||
|
// Fills a selection in memory with zero
|
||||||
|
void fillMemBuf(void *buf, const DataType &buf_type, const DataSpace &space) const;
|
||||||
|
// void fillMemBuf(void *buf, DataType& buf_type, DataSpace& space); // removed from 1.8.18 and 1.10.1
|
||||||
|
|
||||||
|
// Gets the creation property list of this dataset.
|
||||||
|
DSetCreatPropList getCreatePlist() const;
|
||||||
|
|
||||||
|
// Gets the access property list of this dataset.
|
||||||
|
DSetAccPropList getAccessPlist() const;
|
||||||
|
|
||||||
|
// Returns the address of this dataset in the file.
|
||||||
|
haddr_t getOffset() const;
|
||||||
|
|
||||||
|
// Gets the dataspace of this dataset.
|
||||||
|
virtual DataSpace getSpace() const override;
|
||||||
|
|
||||||
|
// Determines whether space has been allocated for a dataset.
|
||||||
|
void getSpaceStatus(H5D_space_status_t &status) const;
|
||||||
|
|
||||||
|
// Returns the amount of storage size required for this dataset.
|
||||||
|
virtual hsize_t getStorageSize() const override;
|
||||||
|
|
||||||
|
// Returns the in memory size of this attribute's data.
|
||||||
|
virtual size_t getInMemDataSize() const override;
|
||||||
|
|
||||||
|
// Returns the number of bytes required to store VL data.
|
||||||
|
hsize_t getVlenBufSize(const DataType &type, const DataSpace &space) const;
|
||||||
|
// hsize_t getVlenBufSize(DataType& type, DataSpace& space) const; // removed from 1.8.18 and 1.10.1
|
||||||
|
|
||||||
|
// Reclaims VL datatype memory buffers.
|
||||||
|
static void vlenReclaim(const DataType &type, const DataSpace &space,
|
||||||
|
const DSetMemXferPropList &xfer_plist, void *buf);
|
||||||
|
static void vlenReclaim(void *buf, const DataType &type, const DataSpace &space = DataSpace::ALL,
|
||||||
|
const DSetMemXferPropList &xfer_plist = DSetMemXferPropList::DEFAULT);
|
||||||
|
|
||||||
|
// Reads the data of this dataset and stores it in the provided buffer.
|
||||||
|
// The memory and file dataspaces and the transferring property list
|
||||||
|
// can be defaults.
|
||||||
|
void read(void *buf, const DataType &mem_type, const DataSpace &mem_space = DataSpace::ALL,
|
||||||
|
const DataSpace & file_space = DataSpace::ALL,
|
||||||
|
const DSetMemXferPropList &xfer_plist = DSetMemXferPropList::DEFAULT) const;
|
||||||
|
void read(H5std_string &buf, const DataType &mem_type, const DataSpace &mem_space = DataSpace::ALL,
|
||||||
|
const DataSpace & file_space = DataSpace::ALL,
|
||||||
|
const DSetMemXferPropList &xfer_plist = DSetMemXferPropList::DEFAULT) const;
|
||||||
|
|
||||||
|
// Writes the buffered data to this dataset.
|
||||||
|
// The memory and file dataspaces and the transferring property list
|
||||||
|
// can be defaults.
|
||||||
|
void write(const void *buf, const DataType &mem_type, const DataSpace &mem_space = DataSpace::ALL,
|
||||||
|
const DataSpace & file_space = DataSpace::ALL,
|
||||||
|
const DSetMemXferPropList &xfer_plist = DSetMemXferPropList::DEFAULT) const;
|
||||||
|
void write(const H5std_string &buf, const DataType &mem_type, const DataSpace &mem_space = DataSpace::ALL,
|
||||||
|
const DataSpace & file_space = DataSpace::ALL,
|
||||||
|
const DSetMemXferPropList &xfer_plist = DSetMemXferPropList::DEFAULT) const;
|
||||||
|
|
||||||
|
// Iterates the selected elements in the specified dataspace - not implemented in C++ style yet
|
||||||
|
int iterateElems(void *buf, const DataType &type, const DataSpace &space, H5D_operator_t op,
|
||||||
|
void *op_data = NULL);
|
||||||
|
|
||||||
|
///\brief Returns this class name.
|
||||||
|
virtual H5std_string
|
||||||
|
fromClass() const override
|
||||||
|
{
|
||||||
|
return ("DataSet");
|
||||||
|
}
|
||||||
|
|
||||||
|
// Creates a dataset by way of dereference.
|
||||||
|
DataSet(const H5Location &loc, const void *ref, H5R_type_t ref_type = H5R_OBJECT,
|
||||||
|
const PropList &plist = PropList::DEFAULT);
|
||||||
|
DataSet(const Attribute &attr, const void *ref, H5R_type_t ref_type = H5R_OBJECT,
|
||||||
|
const PropList &plist = PropList::DEFAULT);
|
||||||
|
|
||||||
|
// Default constructor.
|
||||||
|
DataSet();
|
||||||
|
|
||||||
|
// Copy constructor - same as the original DataSet.
|
||||||
|
DataSet(const DataSet &original);
|
||||||
|
|
||||||
|
// Assignment operator
|
||||||
|
DataSet &operator=(const DataSet &original);
|
||||||
|
|
||||||
|
// Creates a copy of an existing DataSet using its id.
|
||||||
|
DataSet(const hid_t existing_id);
|
||||||
|
|
||||||
|
// Gets the dataset id.
|
||||||
|
virtual hid_t getId() const override;
|
||||||
|
|
||||||
|
// Destructor: properly terminates access to this dataset.
|
||||||
|
virtual ~DataSet() override;
|
||||||
|
|
||||||
|
protected:
|
||||||
|
#ifndef DOXYGEN_SHOULD_SKIP_THIS
|
||||||
|
// Sets the dataset id.
|
||||||
|
virtual void p_setId(const hid_t new_id) override;
|
||||||
|
#endif // DOXYGEN_SHOULD_SKIP_THIS
|
||||||
|
|
||||||
|
private:
|
||||||
|
hid_t id; // HDF5 dataset id
|
||||||
|
|
||||||
|
// This function contains the common code that is used by
|
||||||
|
// getTypeClass and various API functions getXxxType
|
||||||
|
// defined in AbstractDs for generic datatype and specific
|
||||||
|
// sub-types
|
||||||
|
virtual hid_t p_get_type() const override;
|
||||||
|
|
||||||
|
// Reads variable or fixed len strings from this dataset.
|
||||||
|
void p_read_fixed_len(const hid_t mem_type_id, const hid_t mem_space_id, const hid_t file_space_id,
|
||||||
|
const hid_t xfer_plist_id, H5std_string &strg) const;
|
||||||
|
void p_read_variable_len(const hid_t mem_type_id, const hid_t mem_space_id, const hid_t file_space_id,
|
||||||
|
const hid_t xfer_plist_id, H5std_string &strg) const;
|
||||||
|
|
||||||
|
// Friend function to set DataSet id. For library use only.
|
||||||
|
friend void f_DataSet_setId(DataSet *dset, hid_t new_id);
|
||||||
|
|
||||||
|
}; // end of DataSet
|
||||||
|
} // namespace H5
|
||||||
|
|
||||||
|
#endif // H5DataSet_H
|
||||||
|
|
@ -0,0 +1,158 @@
|
||||||
|
// C++ informative line for the emacs editor: -*- C++ -*-
|
||||||
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
|
||||||
|
* Copyright by The HDF Group. *
|
||||||
|
* Copyright by the Board of Trustees of the University of Illinois. *
|
||||||
|
* All rights reserved. *
|
||||||
|
* *
|
||||||
|
* This file is part of HDF5. The full HDF5 copyright notice, including *
|
||||||
|
* terms governing use, modification, and redistribution, is contained in *
|
||||||
|
* the COPYING file, which can be found at the root of the source code *
|
||||||
|
* distribution tree, or in https://www.hdfgroup.org/licenses. *
|
||||||
|
* If you do not have access to either file, you may request a copy from *
|
||||||
|
* help@hdfgroup.org. *
|
||||||
|
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
|
||||||
|
|
||||||
|
#ifndef H5DataSpace_H
|
||||||
|
#define H5DataSpace_H
|
||||||
|
|
||||||
|
namespace H5 {
|
||||||
|
|
||||||
|
/*! \class DataSpace
|
||||||
|
\brief Class DataSpace inherits from IdComponent and provides wrappers for
|
||||||
|
the HDF5's dataspaces.
|
||||||
|
*/
|
||||||
|
// Inheritance: IdComponent
|
||||||
|
class H5_DLLCPP DataSpace : public IdComponent {
|
||||||
|
public:
|
||||||
|
///\brief Default DataSpace objects
|
||||||
|
static const DataSpace &ALL;
|
||||||
|
|
||||||
|
// Creates a dataspace object given the space type
|
||||||
|
DataSpace(H5S_class_t type = H5S_SCALAR);
|
||||||
|
|
||||||
|
// Creates a simple dataspace
|
||||||
|
DataSpace(int rank, const hsize_t *dims, const hsize_t *maxdims = NULL);
|
||||||
|
|
||||||
|
// Creates a DataSpace object using an existing dataspace id.
|
||||||
|
DataSpace(const hid_t space_id);
|
||||||
|
|
||||||
|
// Copy constructor - same as the original DataSpace.
|
||||||
|
DataSpace(const DataSpace &original);
|
||||||
|
|
||||||
|
// Assignment operator
|
||||||
|
DataSpace &operator=(const DataSpace &rhs);
|
||||||
|
|
||||||
|
// Closes this dataspace.
|
||||||
|
virtual void close() override;
|
||||||
|
|
||||||
|
// Makes copy of an existing dataspace.
|
||||||
|
void copy(const DataSpace &like_space);
|
||||||
|
|
||||||
|
// Copies the extent of this dataspace.
|
||||||
|
void extentCopy(const DataSpace &dest_space) const;
|
||||||
|
// removed from 1.8.18 and 1.10.1
|
||||||
|
// void extentCopy(DataSpace& dest_space) const;
|
||||||
|
|
||||||
|
// Gets the bounding box containing the current selection.
|
||||||
|
void getSelectBounds(hsize_t *start, hsize_t *end) const;
|
||||||
|
|
||||||
|
// Gets the number of element points in the current selection.
|
||||||
|
hssize_t getSelectElemNpoints() const;
|
||||||
|
|
||||||
|
// Retrieves the list of element points currently selected.
|
||||||
|
void getSelectElemPointlist(hsize_t startpoint, hsize_t numpoints, hsize_t *buf) const;
|
||||||
|
|
||||||
|
// Gets the list of hyperslab blocks currently selected.
|
||||||
|
void getSelectHyperBlocklist(hsize_t startblock, hsize_t numblocks, hsize_t *buf) const;
|
||||||
|
|
||||||
|
// Get number of hyperslab blocks.
|
||||||
|
hssize_t getSelectHyperNblocks() const;
|
||||||
|
|
||||||
|
// Gets the number of elements in this dataspace selection.
|
||||||
|
hssize_t getSelectNpoints() const;
|
||||||
|
|
||||||
|
// Retrieves dataspace dimension size and maximum size.
|
||||||
|
int getSimpleExtentDims(hsize_t *dims, hsize_t *maxdims = NULL) const;
|
||||||
|
|
||||||
|
// Gets the dimensionality of this dataspace.
|
||||||
|
int getSimpleExtentNdims() const;
|
||||||
|
|
||||||
|
// Gets the number of elements in this dataspace.
|
||||||
|
// 12/05/00 - changed return type to hssize_t from hsize_t - C API
|
||||||
|
hssize_t getSimpleExtentNpoints() const;
|
||||||
|
|
||||||
|
// Gets the current class of this dataspace.
|
||||||
|
H5S_class_t getSimpleExtentType() const;
|
||||||
|
|
||||||
|
// Determines if this dataspace is a simple one.
|
||||||
|
bool isSimple() const;
|
||||||
|
|
||||||
|
// Sets the offset of this simple dataspace.
|
||||||
|
void offsetSimple(const hssize_t *offset) const;
|
||||||
|
|
||||||
|
// Selects the entire dataspace.
|
||||||
|
void selectAll() const;
|
||||||
|
|
||||||
|
// Selects array elements to be included in the selection for
|
||||||
|
// this dataspace.
|
||||||
|
void selectElements(H5S_seloper_t op, const size_t num_elements, const hsize_t *coord) const;
|
||||||
|
|
||||||
|
// Selects a hyperslab region to add to the current selected region.
|
||||||
|
void selectHyperslab(H5S_seloper_t op, const hsize_t *count, const hsize_t *start,
|
||||||
|
const hsize_t *stride = NULL, const hsize_t *block = NULL) const;
|
||||||
|
|
||||||
|
// Resets the selection region to include no elements.
|
||||||
|
void selectNone() const;
|
||||||
|
|
||||||
|
// Verifies that the selection is within the extent of the dataspace.
|
||||||
|
bool selectValid() const;
|
||||||
|
|
||||||
|
// Removes the extent from this dataspace.
|
||||||
|
void setExtentNone() const;
|
||||||
|
|
||||||
|
// Sets or resets the size of this dataspace.
|
||||||
|
void setExtentSimple(int rank, const hsize_t *current_size, const hsize_t *maximum_size = NULL) const;
|
||||||
|
|
||||||
|
///\brief Returns this class name.
|
||||||
|
virtual H5std_string
|
||||||
|
fromClass() const override
|
||||||
|
{
|
||||||
|
return ("DataSpace");
|
||||||
|
}
|
||||||
|
|
||||||
|
// Gets the dataspace id.
|
||||||
|
virtual hid_t getId() const override;
|
||||||
|
|
||||||
|
// Deletes the global constant
|
||||||
|
static void deleteConstants();
|
||||||
|
|
||||||
|
// Destructor: properly terminates access to this dataspace.
|
||||||
|
virtual ~DataSpace() override;
|
||||||
|
|
||||||
|
#ifndef DOXYGEN_SHOULD_SKIP_THIS
|
||||||
|
|
||||||
|
protected:
|
||||||
|
// Sets the dataspace id.
|
||||||
|
virtual void p_setId(const hid_t new_id) override;
|
||||||
|
|
||||||
|
#endif // DOXYGEN_SHOULD_SKIP_THIS
|
||||||
|
|
||||||
|
private:
|
||||||
|
hid_t id; // HDF5 dataspace id
|
||||||
|
|
||||||
|
#ifndef DOXYGEN_SHOULD_SKIP_THIS
|
||||||
|
|
||||||
|
static DataSpace *ALL_;
|
||||||
|
|
||||||
|
// Creates the global constant
|
||||||
|
static DataSpace *getConstant();
|
||||||
|
|
||||||
|
// Friend function to set DataSpace id. For library use only.
|
||||||
|
friend void f_DataSpace_setId(DataSpace *dspace, hid_t new_id);
|
||||||
|
|
||||||
|
#endif // DOXYGEN_SHOULD_SKIP_THIS
|
||||||
|
|
||||||
|
}; // end of DataSpace
|
||||||
|
} // namespace H5
|
||||||
|
|
||||||
|
#endif // H5DataSpace_H
|
||||||
|
|
@ -0,0 +1,186 @@
|
||||||
|
// C++ informative line for the emacs editor: -*- C++ -*-
|
||||||
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
|
||||||
|
* Copyright by The HDF Group. *
|
||||||
|
* Copyright by the Board of Trustees of the University of Illinois. *
|
||||||
|
* All rights reserved. *
|
||||||
|
* *
|
||||||
|
* This file is part of HDF5. The full HDF5 copyright notice, including *
|
||||||
|
* terms governing use, modification, and redistribution, is contained in *
|
||||||
|
* the COPYING file, which can be found at the root of the source code *
|
||||||
|
* distribution tree, or in https://www.hdfgroup.org/licenses. *
|
||||||
|
* If you do not have access to either file, you may request a copy from *
|
||||||
|
* help@hdfgroup.org. *
|
||||||
|
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
|
||||||
|
|
||||||
|
#ifndef H5DataType_H
|
||||||
|
#define H5DataType_H
|
||||||
|
|
||||||
|
namespace H5 {
|
||||||
|
|
||||||
|
/*! \class DataType
|
||||||
|
\brief Class DataType provides generic operations on HDF5 datatypes.
|
||||||
|
|
||||||
|
DataType inherits from H5Object because a named datatype is an HDF5
|
||||||
|
object and is a base class of ArrayType, AtomType, CompType, EnumType,
|
||||||
|
and VarLenType.
|
||||||
|
*/
|
||||||
|
// Inheritance: DataType -> H5Object -> H5Location -> IdComponent
|
||||||
|
class H5_DLLCPP DataType : public H5Object {
|
||||||
|
public:
|
||||||
|
// Creates a datatype given its class and size
|
||||||
|
DataType(const H5T_class_t type_class, size_t size);
|
||||||
|
|
||||||
|
// Copy constructor - same as the original DataType.
|
||||||
|
DataType(const DataType &original);
|
||||||
|
|
||||||
|
// Creates a copy of a predefined type
|
||||||
|
DataType(const PredType &pred_type);
|
||||||
|
|
||||||
|
// Constructors to open a generic named datatype at a given location.
|
||||||
|
DataType(const H5Location &loc, const char *name);
|
||||||
|
DataType(const H5Location &loc, const H5std_string &name);
|
||||||
|
|
||||||
|
// Creates a datatype by way of dereference.
|
||||||
|
DataType(const H5Location &loc, const void *ref, H5R_type_t ref_type = H5R_OBJECT,
|
||||||
|
const PropList &plist = PropList::DEFAULT);
|
||||||
|
// DataType(const Attribute& attr, const void* ref, H5R_type_t ref_type = H5R_OBJECT, const
|
||||||
|
// PropList& plist = PropList::DEFAULT);
|
||||||
|
|
||||||
|
// Closes this datatype.
|
||||||
|
virtual void close() override;
|
||||||
|
|
||||||
|
// Copies an existing datatype to this datatype object.
|
||||||
|
void copy(const DataType &like_type);
|
||||||
|
|
||||||
|
// Copies the datatype of dset to this datatype object.
|
||||||
|
void copy(const DataSet &dset);
|
||||||
|
|
||||||
|
// Returns a DataType instance by decoding the binary object
|
||||||
|
// description of this datatype.
|
||||||
|
virtual DataType *decode() const;
|
||||||
|
|
||||||
|
// Creates a binary object description of this datatype.
|
||||||
|
void encode();
|
||||||
|
|
||||||
|
// Returns the datatype class identifier.
|
||||||
|
H5T_class_t getClass() const;
|
||||||
|
|
||||||
|
// Commits a transient datatype to a file; this datatype becomes
|
||||||
|
// a named datatype which can be accessed from the location.
|
||||||
|
void commit(const H5Location &loc, const char *name);
|
||||||
|
void commit(const H5Location &loc, const H5std_string &name);
|
||||||
|
|
||||||
|
// These two overloaded functions are kept for backward compatibility
|
||||||
|
// only; they missed the const - removed from 1.8.18 and 1.10.1
|
||||||
|
// void commit(H5Location& loc, const char* name);
|
||||||
|
// void commit(H5Location& loc, const H5std_string& name);
|
||||||
|
|
||||||
|
// Determines whether this datatype is a named datatype or
|
||||||
|
// a transient datatype.
|
||||||
|
bool committed() const;
|
||||||
|
|
||||||
|
// Finds a conversion function that can handle the conversion
|
||||||
|
// this datatype to the given datatype, dest.
|
||||||
|
H5T_conv_t find(const DataType &dest, H5T_cdata_t **pcdata) const;
|
||||||
|
|
||||||
|
// Converts data from between specified datatypes.
|
||||||
|
void convert(const DataType &dest, size_t nelmts, void *buf, void *background,
|
||||||
|
const PropList &plist = PropList::DEFAULT) const;
|
||||||
|
|
||||||
|
// Assignment operator
|
||||||
|
DataType &operator=(const DataType &rhs);
|
||||||
|
|
||||||
|
// Determines whether two datatypes are the same.
|
||||||
|
bool operator==(const DataType &compared_type) const;
|
||||||
|
|
||||||
|
// Determines whether two datatypes are not the same.
|
||||||
|
bool operator!=(const DataType &compared_type) const;
|
||||||
|
|
||||||
|
// Locks a datatype.
|
||||||
|
void lock() const;
|
||||||
|
|
||||||
|
// Returns the size of a datatype.
|
||||||
|
size_t getSize() const;
|
||||||
|
|
||||||
|
// Returns the base datatype from which a datatype is derived.
|
||||||
|
// Note: not quite right for specific types yet???
|
||||||
|
DataType getSuper() const;
|
||||||
|
|
||||||
|
// Registers a conversion function.
|
||||||
|
void registerFunc(H5T_pers_t pers, const char *name, const DataType &dest, H5T_conv_t func) const;
|
||||||
|
void registerFunc(H5T_pers_t pers, const H5std_string &name, const DataType &dest, H5T_conv_t func) const;
|
||||||
|
|
||||||
|
// Removes a conversion function from all conversion paths.
|
||||||
|
void unregister(H5T_pers_t pers, const char *name, const DataType &dest, H5T_conv_t func) const;
|
||||||
|
void unregister(H5T_pers_t pers, const H5std_string &name, const DataType &dest, H5T_conv_t func) const;
|
||||||
|
|
||||||
|
// Tags an opaque datatype.
|
||||||
|
void setTag(const char *tag) const;
|
||||||
|
void setTag(const H5std_string &tag) const;
|
||||||
|
|
||||||
|
// Gets the tag associated with an opaque datatype.
|
||||||
|
H5std_string getTag() const;
|
||||||
|
|
||||||
|
// Checks whether this datatype contains (or is) a certain type class.
|
||||||
|
bool detectClass(H5T_class_t cls) const;
|
||||||
|
static bool detectClass(const PredType &pred_type, H5T_class_t cls);
|
||||||
|
|
||||||
|
// Checks whether this datatype is a variable-length string.
|
||||||
|
bool isVariableStr() const;
|
||||||
|
|
||||||
|
// Returns a copy of the creation property list of a datatype.
|
||||||
|
PropList getCreatePlist() const;
|
||||||
|
|
||||||
|
///\brief Returns this class name.
|
||||||
|
virtual H5std_string
|
||||||
|
fromClass() const override
|
||||||
|
{
|
||||||
|
return ("DataType");
|
||||||
|
}
|
||||||
|
|
||||||
|
// Creates a copy of an existing DataType using its id
|
||||||
|
DataType(const hid_t type_id);
|
||||||
|
|
||||||
|
// Default constructor
|
||||||
|
DataType();
|
||||||
|
|
||||||
|
// Determines whether this datatype has a binary object description.
|
||||||
|
bool hasBinaryDesc() const;
|
||||||
|
|
||||||
|
// Gets the datatype id.
|
||||||
|
virtual hid_t getId() const override;
|
||||||
|
|
||||||
|
// Destructor: properly terminates access to this datatype.
|
||||||
|
virtual ~DataType() override;
|
||||||
|
|
||||||
|
protected:
|
||||||
|
#ifndef DOXYGEN_SHOULD_SKIP_THIS
|
||||||
|
hid_t id; // HDF5 datatype id
|
||||||
|
|
||||||
|
// Returns an id of a type by decoding the binary object
|
||||||
|
// description of this datatype.
|
||||||
|
hid_t p_decode() const;
|
||||||
|
|
||||||
|
// Sets the datatype id.
|
||||||
|
virtual void p_setId(const hid_t new_id) override;
|
||||||
|
|
||||||
|
// Opens a datatype and returns the id.
|
||||||
|
hid_t p_opentype(const H5Location &loc, const char *dtype_name) const;
|
||||||
|
|
||||||
|
#endif // DOXYGEN_SHOULD_SKIP_THIS
|
||||||
|
|
||||||
|
private:
|
||||||
|
// Buffer for binary object description of this datatype, allocated
|
||||||
|
// in DataType::encode and used in DataType::decode
|
||||||
|
unsigned char *encoded_buf;
|
||||||
|
size_t buf_size;
|
||||||
|
|
||||||
|
// Friend function to set DataType id. For library use only.
|
||||||
|
friend void f_DataType_setId(DataType *dtype, hid_t new_id);
|
||||||
|
|
||||||
|
void p_commit(hid_t loc_id, const char *name);
|
||||||
|
|
||||||
|
}; // end of DataType
|
||||||
|
} // namespace H5
|
||||||
|
|
||||||
|
#endif // H5DataType_H
|
||||||
|
|
@ -0,0 +1,162 @@
|
||||||
|
// C++ informative line for the emacs editor: -*- C++ -*-
|
||||||
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
|
||||||
|
* Copyright by The HDF Group. *
|
||||||
|
* Copyright by the Board of Trustees of the University of Illinois. *
|
||||||
|
* All rights reserved. *
|
||||||
|
* *
|
||||||
|
* This file is part of HDF5. The full HDF5 copyright notice, including *
|
||||||
|
* terms governing use, modification, and redistribution, is contained in *
|
||||||
|
* the COPYING file, which can be found at the root of the source code *
|
||||||
|
* distribution tree, or in https://www.hdfgroup.org/licenses. *
|
||||||
|
* If you do not have access to either file, you may request a copy from *
|
||||||
|
* help@hdfgroup.org. *
|
||||||
|
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
|
||||||
|
|
||||||
|
#ifndef H5DSCreatPropList_H
|
||||||
|
#define H5DSCreatPropList_H
|
||||||
|
|
||||||
|
namespace H5 {
|
||||||
|
|
||||||
|
// Class forwarding
|
||||||
|
class DataType;
|
||||||
|
class DataSpace;
|
||||||
|
|
||||||
|
/*! \class DSetCreatPropList
|
||||||
|
\brief Class DSetCreatPropList inherits from ObjCreatPropList and provides
|
||||||
|
wrappers for the HDF5 dataset creation property functions.
|
||||||
|
*/
|
||||||
|
// Inheritance: ObjCreatPropList -> PropList -> IdComponent
|
||||||
|
class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList {
|
||||||
|
public:
|
||||||
|
///\brief Default dataset creation property list.
|
||||||
|
static const DSetCreatPropList &DEFAULT;
|
||||||
|
|
||||||
|
// Creates a dataset creation property list.
|
||||||
|
DSetCreatPropList();
|
||||||
|
|
||||||
|
// Queries whether all the filters set in this property list are
|
||||||
|
// available currently.
|
||||||
|
bool allFiltersAvail() const;
|
||||||
|
|
||||||
|
// Get space allocation time for this property.
|
||||||
|
H5D_alloc_time_t getAllocTime() const;
|
||||||
|
|
||||||
|
// Set space allocation time for dataset during creation.
|
||||||
|
void setAllocTime(H5D_alloc_time_t alloc_time) const;
|
||||||
|
|
||||||
|
// Retrieves the size of the chunks used to store a chunked layout dataset.
|
||||||
|
int getChunk(int max_ndims, hsize_t *dim) const;
|
||||||
|
|
||||||
|
// Sets the size of the chunks used to store a chunked layout dataset.
|
||||||
|
void setChunk(int ndims, const hsize_t *dim) const;
|
||||||
|
|
||||||
|
// Returns information about an external file.
|
||||||
|
void getExternal(unsigned idx, size_t name_size, char *name, off_t &offset, hsize_t &size) const;
|
||||||
|
|
||||||
|
// Returns the number of external files for a dataset.
|
||||||
|
int getExternalCount() const;
|
||||||
|
|
||||||
|
// Gets fill value writing time.
|
||||||
|
H5D_fill_time_t getFillTime() const;
|
||||||
|
|
||||||
|
// Sets fill value writing time for dataset.
|
||||||
|
void setFillTime(H5D_fill_time_t fill_time) const;
|
||||||
|
|
||||||
|
// Retrieves a dataset fill value.
|
||||||
|
void getFillValue(const DataType &fvalue_type, void *value) const;
|
||||||
|
|
||||||
|
// Sets a dataset fill value.
|
||||||
|
void setFillValue(const DataType &fvalue_type, const void *value) const;
|
||||||
|
|
||||||
|
// Returns information about a filter in a pipeline.
|
||||||
|
H5Z_filter_t getFilter(int filter_number, unsigned int &flags, size_t &cd_nelmts, unsigned int *cd_values,
|
||||||
|
size_t namelen, char name[], unsigned int &filter_config) const;
|
||||||
|
|
||||||
|
// Returns information about a filter in a pipeline given the filter id.
|
||||||
|
void getFilterById(H5Z_filter_t filter_id, unsigned int &flags, size_t &cd_nelmts,
|
||||||
|
unsigned int *cd_values, size_t namelen, char name[],
|
||||||
|
unsigned int &filter_config) const;
|
||||||
|
|
||||||
|
// Gets the layout of the raw data storage of the data that uses this
|
||||||
|
// property list.
|
||||||
|
H5D_layout_t getLayout() const;
|
||||||
|
|
||||||
|
// Sets the type of storage used to store the raw data for the
|
||||||
|
// dataset that uses this property list.
|
||||||
|
void setLayout(H5D_layout_t layout) const;
|
||||||
|
|
||||||
|
// Returns the number of filters in the pipeline.
|
||||||
|
int getNfilters() const;
|
||||||
|
|
||||||
|
// Checks if fill value has been defined for this property.
|
||||||
|
H5D_fill_value_t isFillValueDefined() const;
|
||||||
|
|
||||||
|
// Modifies the specified filter.
|
||||||
|
void modifyFilter(H5Z_filter_t filter_id, unsigned int flags, size_t cd_nelmts,
|
||||||
|
const unsigned int cd_values[]) const;
|
||||||
|
|
||||||
|
// Remove one or all filters from the filter pipeline.
|
||||||
|
void removeFilter(H5Z_filter_t filter_id) const;
|
||||||
|
|
||||||
|
// Sets compression method and compression level.
|
||||||
|
void setDeflate(int level) const;
|
||||||
|
|
||||||
|
// Adds an external file to the list of external files.
|
||||||
|
void setExternal(const char *name, off_t offset, hsize_t size) const;
|
||||||
|
|
||||||
|
// Adds a filter to the filter pipeline.
|
||||||
|
void setFilter(H5Z_filter_t filter, unsigned int flags = 0, size_t cd_nelmts = 0,
|
||||||
|
const unsigned int cd_values[] = NULL) const;
|
||||||
|
|
||||||
|
// Sets Fletcher32 checksum of EDC for this property list.
|
||||||
|
void setFletcher32() const;
|
||||||
|
|
||||||
|
// Sets method of the shuffle filter.
|
||||||
|
void setShuffle() const;
|
||||||
|
|
||||||
|
// Sets SZIP compression method.
|
||||||
|
void setSzip(unsigned int options_mask, unsigned int pixels_per_block) const;
|
||||||
|
|
||||||
|
// Sets N-bit compression method.
|
||||||
|
void setNbit() const;
|
||||||
|
|
||||||
|
// Maps elements of a virtual dataset to elements of the source dataset.
|
||||||
|
void setVirtual(const DataSpace &vspace, const char *src_fname, const char *src_dsname,
|
||||||
|
const DataSpace &sspace) const;
|
||||||
|
void setVirtual(const DataSpace &vspace, const H5std_string src_fname, const H5std_string src_dsname,
|
||||||
|
const DataSpace &sspace) const;
|
||||||
|
|
||||||
|
///\brief Returns this class name.
|
||||||
|
virtual H5std_string
|
||||||
|
fromClass() const override
|
||||||
|
{
|
||||||
|
return ("DSetCreatPropList");
|
||||||
|
}
|
||||||
|
|
||||||
|
// Copy constructor - same as the original DSetCreatPropList.
|
||||||
|
DSetCreatPropList(const DSetCreatPropList &orig);
|
||||||
|
|
||||||
|
// Creates a copy of an existing dataset creation property list
|
||||||
|
// using the property list id.
|
||||||
|
DSetCreatPropList(const hid_t plist_id);
|
||||||
|
|
||||||
|
// Noop destructor.
|
||||||
|
virtual ~DSetCreatPropList() override;
|
||||||
|
|
||||||
|
#ifndef DOXYGEN_SHOULD_SKIP_THIS
|
||||||
|
|
||||||
|
// Deletes the global constant, should only be used by the library
|
||||||
|
static void deleteConstants();
|
||||||
|
|
||||||
|
private:
|
||||||
|
static DSetCreatPropList *DEFAULT_;
|
||||||
|
|
||||||
|
// Creates the global constant, should only be used by the library
|
||||||
|
static DSetCreatPropList *getConstant();
|
||||||
|
|
||||||
|
#endif // DOXYGEN_SHOULD_SKIP_THIS
|
||||||
|
|
||||||
|
}; // end of DSetCreatPropList
|
||||||
|
} // namespace H5
|
||||||
|
|
||||||
|
#endif // H5DSCreatPropList_H
|
||||||
Some files were not shown because too many files have changed in this diff Show More
Loading…
Reference in New Issue