#!/bin/tcsh -f
#
#~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
# copyright: 2016 to the present, california institute of technology.
# all rights reserved. united states government sponsorship acknowledged.
#
# THESE SCRIPTS ARE PROVIDED TO YOU "AS IS" WITH NO WARRANTIES OF CORRECTNESS. USE AT YOUR OWN RISK.
#
# Author: David Bekaert
# Organization: Jet Propulsion Laboratory, California Institute of Technology
#~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

set curdir = `pwd` 
echo $curdir

# getting the datatype to be processed
set datasource = `grep source_data input_file | awk '{print $2}'`
set geom_suffix = `grep geom_suffix  input_file | awk '{print $2}'`
set overwrite_flag = `grep overwrite input_file | awk '{print $2}'`

# adding the overwrite_flag, set by default to overwrite files
if ( "$overwrite_flag" == "" ) then
    set overwrite_flag = y
endif
if ( "$overwrite_flag" != "y" & "$overwrite_flag" != "yes" & "$overwrite_flag" != "n" & "$overwrite_flag" != "no") then
    set overwrite_flag = y
    echo "Did not recognize the overwrite option, will set to overwrite files..."
endif
if ( "$overwrite_flag" == "no") then
    set overwrite_flag = n
endif

if ("$datasource" != "slc_stack_burst") then
    ## default filenames when starting from scratch with isce stack generation:
    # this is when one start processing with isce from scratch
    set los_file = $curdir/master/geom/los.rdr$geom_suffix
    set lon_file = $curdir/master/geom/lon.rdr$geom_suffix
    set lat_file = $curdir/master/geom/lat.rdr$geom_suffix
    set dem_file = $curdir/master/geom/z.rdr$geom_suffix
    # setting the output filenames
    set heading_file_out = $curdir/heading.raw
    set incangle_file_out = $curdir/inc_angle.raw
    set lon_file_out = $curdir/lon.raw
    set lat_file_out = $curdir/lat.raw
    set dem_file_out = $curdir/dem.raw
    ## modification of the height filename for the SLC stack processing:
    if ("$datasource" == "slc_stack") then
         set dem_file = $curdir/master/geom/hgt.rdr$geom_suffix
    endif 

    # extracting the dem
    if ( -f $dem_file_out & "$overwrite_flag" == "n" ) then
        echo radar-coded dem file exist and will not be overwritten
    else
        echo extracting the radar-coded dem file
        echo "imageMath.py -e="a_0" --a=$dem_file -o $dem_file_out -s BIL"
        imageMath.py -e="a_0" --a=$dem_file -o $dem_file_out -s BIL
        echo
    endif
    echo

    # extracting the heading
    if ( -f $heading_file_out & "$overwrite_flag" == "n" ) then
         echo heading file and will not be overwritten
    else
        echo extracting the heading file
        echo "imageMath.py -e=''-1*a_1-270'' --a=$los_file -o $heading_file_out -s BIL"
        imageMath.py -e="-1*a_1-270" --a=$los_file -o $heading_file_out -s BIL
        gdal_translate -a_nodata -270 -of VRT $heading_file_out $heading_file_out.vrt
        get_mean_isce.py $heading_file_out > $curdir/heading.1.in
        echo
    endif
    echo  

    # extracting the inc  angles rewrite into stamps format
    if ( -f $incangle_file_out & "$overwrite_flag" == "n" ) then
        echo inc angle file exist and will not be overwritten
    else
        echo extracting the inc angle file
        echo "imageMath.py -e="a_0" --a=$los_file -o $incangle_file_out -s BIL"
        imageMath.py -e="a_0" --a=$los_file -o $incangle_file_out -s BIL
        echo
    endif
    echo 

    # getting the LOS conversion 
    isce_los2stamps_ENU

    # rewriting files into stamps format
    if ( -f $lon_file_out & "$overwrite_flag" == "n" ) then
        echo lon file exist and will not be overwritte
    else
        echo extracting isce lon file
        echo "imageMath.py -e="a_0" --a=$lon_file -o $lon_file_out -s BIL"
        imageMath.py -e="a_0" --a=$lon_file -o $lon_file_out -s BIL
        echo
    endif
    echo

    # echo rewriting isce lat into stamps format
    if ( -f $lat_file_out & "$overwrite_flag" == "n" ) then
        echo lat file exist and will not be overwritten
    else
        echo extracting isce lat file
        echo "imageMath.py -e="a_0" --a=$lat_file -o $lat_file_out -s BIL"
        imageMath.py -e="a_0" --a=$lat_file -o $lat_file_out -s BIL
        echo
    endif
    echo

else
    # this would be the SLC stack burst option
    echo \# BURST IMPLEMENTATION HERE \#
    exit 1
    # for the burst one would need to keep track of the burst numbers, 
    # might need to re-arrange the code in a list
endif