#!/usr/bin/env python3 import isce import numpy as np import shelve import isceobj import copy import argparse import datetime import os from isceobj.Util.decorators import use_api from imageMath import IML import logging def createParser(): ''' Command line parser. ''' parser = argparse.ArgumentParser(description='Focus from raw data to slc') parser.add_argument('-i','--input', dest='indir', type=str, required=True, help='Input directory with raw/slc file') parser.add_argument('-b', '--box' ,dest='bbox', type=float, nargs=4, default=None, help='Bbox (SNWE in degrees)') parser.add_argument('-B', '--box_str' ,dest='bbox_str', type=str, default=None, help='Bbox (SNWE in degrees)') parser.add_argument('-o', '--output', dest='outdir', type=str, required=True, help='Output directory for the cropped raw / slc file') parser.add_argument('-r', '--raw', dest='israw', action='store_true', default=False, help='Explicitly crop the raw file only when both raw/slc are found in same directory.') parser.add_argument('-n', '--native', dest='isnative', action='store_true', default=False, help='Explicitly use native doppler coordinate system') return parser def cmdLineParse(iargs = None): parser = createParser() inps = parser.parse_args(args=iargs) if inps.bbox is None: if inps.bbox_str: inps.bbox = [float(i) for i in inps.bbox_str.split()] else: raise Exception('either --bbox (a list of 4 float values) or --bbox_str (one string) is required. None found!') return inps #####Helper functions for geobox manipulation def geoboxToAzrgbox(frame, geobox, israw=False, isnative=False, margin=0.02): ''' Convert a geo bounding box - SNWE to pixel limits. ''' from isceobj.Util.Poly2D import Poly2D from isceobj.Planet.Planet import Planet from isceobj.Constants import SPEED_OF_LIGHT rgs = [] azs = [] zrange = [-500. , 9000.] combos = [ [geobox[0]-margin, geobox[2]-margin], [geobox[0]-margin, geobox[3]+margin], [geobox[1]+margin, geobox[3]-margin], [geobox[1]+margin, geobox[2]+margin] ] if len(zrange) == 0: zrange = [-500., 9000.] #Should work for earth lookSide = frame.instrument.platform.pointingDirection planet = Planet(pname='Earth') wvl = frame.instrument.getRadarWavelength() if (isnative or israw): ####If geometry is in native doppler / raw ####You need doppler as a function of range to do ####geometry mapping correctly ###Currently doppler is saved as function of pixel number - old ROIPAC style ###Transform to function of slant range coeff = frame._dopplerVsPixel doppler = Poly2D() doppler._meanRange = frame.startingRange doppler._normRange = frame.instrument.rangePixelSize doppler.initPoly(azimuthOrder=0, rangeOrder=len(coeff)-1, coeffs=[coeff]) else: ###Zero doppler system doppler = Poly2D() doppler.initPoly(azimuthOrder=0, rangeOrder=0, coeffs=[[0.]]) ####Do for z in zrange: for combo in combos: try: taz, rgm = frame.orbit.geo2rdr(combo + [z], side=lookSide, doppler=doppler, wvl=wvl) azs.append(taz) rgs.append(rgm) except: pass if len(azs) <= 1: raise Exception('Could not map geobbox coordinates to image') azrgbox = [np.min(azs), np.max(azs), np.min(rgs), np.max(rgs)] if israw: ####If cropping raw product, need to add an aperture length in range and azimuth ###Extra slant range at near and far range due to the uncompressed pulse deltaRg = np.abs(frame.instrument.pulseLength * SPEED_OF_LIGHT/2.0) print('RAW data - adding range aperture (in m) : ', deltaRg) azrgbox[2] -= deltaRg azrgbox[3] += deltaRg ###Extra azimuth samples at far range elp =copy.copy( planet.ellipsoid) svmid = frame.orbit.interpolateOrbit(frame.sensingMid, method='hermite') xyz = svmid.getPosition() vxyz = svmid.getVelocity() llh = elp.xyz_to_llh(xyz) heading = frame.orbit.getENUHeading(frame.sensingMid) print('Heading: ', heading) elp.setSCH(llh[0], llh[1], heading) sch, schvel = elp.xyzdot_to_schdot(xyz, vxyz) vel = np.linalg.norm(schvel) synthAperture = np.abs(wvl* azrgbox[3]/(frame.instrument.platform.antennaLength*vel)) deltaAz = datetime.timedelta(seconds=synthAperture) print('RAW data - adding azimuth aperture (in s) : ', synthAperture) azrgbox[0] -= deltaAz azrgbox[1] += deltaAz return azrgbox def cropFrame(frame, limits, outdir, israw=False): ''' Crop the frame. Parameters to change: startingRange farRange sensingStart sensingStop sensingMid numberOfLines numberOfSamples dopplerVsPixel ''' outframe = copy.deepcopy(frame) if israw: factor = 2 else: factor = 1 ####sensing start ymin = np.floor( (limits[0] - frame.sensingStart).total_seconds() * frame.PRF) print('Line start: ', ymin) ymin = np.int( np.clip(ymin, 0, frame.numberOfLines-1)) ####sensing stop ymax = np.ceil( (limits[1] - frame.sensingStart).total_seconds() * frame.PRF) + 1 print('Line stop: ', ymax) ymax = np.int( np.clip(ymax, 1, frame.numberOfLines)) print('Line limits: ', ymin, ymax) print('Original Line Limits: ', 0, frame.numberOfLines) if (ymax-ymin) <= 1: raise Exception('Azimuth limits appear to not overlap with the scene') outframe.sensingStart = frame.sensingStart + datetime.timedelta(seconds = ymin/frame.PRF) outframe.numberOfLines = ymax - ymin outframe.sensingStop = frame.sensingStop + datetime.timedelta(seconds = (ymax-1)/frame.PRF) outframe.sensingMid = outframe.sensingStart + 0.5 * (outframe.sensingStop - outframe.sensingStart) ####starting range xmin = np.floor( (limits[2] - frame.startingRange)/frame.instrument.rangePixelSize) print('Pixel start: ', xmin) xmin = np.int(np.clip(xmin, 0, (frame.image.width//factor)-1)) ####far range xmax = np.ceil( (limits[3] - frame.startingRange)/frame.instrument.rangePixelSize)+1 print('Pixel stop: ', xmax) xmax = np.int(np.clip(xmax, 1, frame.image.width//factor)) print('Pixel limits: ', xmin, xmax) print('Original Pixel Limits: ', 0, frame.image.width//factor) if (xmax - xmin) <= 1: raise Exception('Range limits appear to not overlap with the scene') outframe.startingRange = frame.startingRange + xmin * frame.instrument.rangePixelSize outframe.numberOfSamples = (xmax - xmin) * factor outframe.setFarRange( frame.startingRange + (xmax-xmin-1) * frame.instrument.rangePixelSize) ####Adjust Doppler centroid coefficients coeff = frame._dopplerVsPixel rng = np.linspace(xmin, xmax, len(coeff) + 1) dops = np.polyval(coeff[::-1], rng) rng = rng - xmin ###Adjust the start pol = np.polyfit(rng, dops, len(coeff)-1) outframe._dopplerVsPixel = list(pol[::-1]) ####Adjusting the image now ####Can potentially use israw to apply more logic but better to use new version if frame.image.xmin != 0 : raise Exception('Looks like you are still using an old version of ISCE. The new version completely strips out the header bytes. Please switch to the latest ...') inname = frame.image.filename suffix = os.path.splitext(inname)[1] outname = os.path.join(outdir, os.path.basename(inname)) #+ suffix outdirname = os.path.dirname(outname) os.makedirs(outdirname, exist_ok=True) indata = IML.mmapFromISCE(inname, logging) indata.bands[0][ymin:ymax,xmin*factor:xmax*factor].tofile(outname) indata = None outframe.image.filename = outname outframe.image.width = outframe.numberOfSamples outframe.image.length = outframe.numberOfLines outframe.image.xmax = outframe.numberOfSamples outframe.image.coord1.coordSize = outframe.numberOfSamples outframe.image.coord1.coordEnd = outframe.numberOfSamples outframe.image.coord2.coordSize = outframe.numberOfLines outframe.image.coord2.coordEnd = outframe.numberOfLines outframe.image.renderHdr() return outframe def main(iargs=None): ####Parse command line inps = cmdLineParse(iargs) slcFound = False rawFound = False ###Try to find raw product try: ####Load raw parameters with shelve.open(os.path.join(inps.indir, 'raw')) as db: rawFrame = db['frame'] rawFound = True except: pass ###Try to find slc product try: ####Load slc parameters with shelve.open(os.path.join(inps.indir, 'data')) as db: slcFrame = db['frame'] slcFound = True except: pass if inps.israw and (not rawFound): raise Exception('Explicit cropping of raw product requested but raw product not found ....') if inps.israw: frame = rawFrame else: frame = slcFrame #####Determine azimuth and range limits limits = geoboxToAzrgbox(frame, inps.bbox, israw=inps.israw, isnative=inps.isnative) #####Crop the actual frame with limits outFrame = cropFrame(frame, limits, inps.outdir, israw=inps.israw) #####Save product to shelve if inps.israw: pickname = os.path.join(inps.outdir, 'raw') else: pickname = os.path.join(inps.outdir, 'data') with shelve.open(pickname) as db: db['frame'] = outFrame if __name__ == '__main__': ''' Main driver. ''' main()