* Changes to fetchOrbit.py to download orbit files in the new ESA website
I've made changes to the fetchOrbit.py to download the files on the https://scihub.copernicus.eu/gnss/#/home. I've used the generic credentials to query and download the orbit files.
* Update fetchOrbit.py
* Make output path generic
I've used os.path.join on line no. 165 to make it more generic.
* Set the verify option to true
I've set the verify option to True to remove the warning regarding "Unverified HTTPS request".
* Changes to the download link of the fetchOrbit.py
The download link before uses the href link on the XML of the website. It was properly working right until yesterday when it didn't work properly.
Instead I've edited the script to be consistent instead with the download link on the scihub copernicus GNSS website. I've tested it and it worked properly.
* Update fetchOrbit.py
After running the currently modified fetchOrbits.py, I've found out that the downloaded precise orbits were based on the date that they were processed instead of the date that they can be used. I've also modified the code to prevent downloading of restituted orbit if the precise orbit is available.
Pls. check if the changes I've made applies the orbit files to the Sentinel-1 SLC images properly.
* stackStripMap.py: change numbering style to match with topsStack
* Stack.py: separate parallel processors in topo.py from runfiles
* stackSentinel.py: add a new argument for parallel processors in topo.py
* Stack.py: remove extra num_process for unpackStackReferenceSLC
* stackSentinel.py: tie numProcess4topo to numProcessif the first not specified
* stackSentinel.py:using geopandas to calculate intersection between bbox and SAFE file coverage region
* stackSentinel.py:using geopandas and shapely package to calculate whether there are intersections between bbox and sentinel SAFE file. And remove import geopandas and shapely part into generate_geopolygon function
* stackSentinel.py: using shapely package to check whether bbox intersect with SAFE file coverage
* stackSentinel.py: using shapely package to check whether bbox intersect with SAFE file coverage
* stackSentinel.py:using shapely package to find whether bbox intersects with SAFE file
* stackSentinel.py:remove matplotlib DEBUG message#L14-L18
* ImageLib: fix str syntax
* stackSentl: rename slc workflow merge for consistency
rename the mergeSLC step in "slc" workflow, to be consistent with the other workflows.
* topsStack: check inconsistent num of bursts in secondary images
+ extractCommonValidRegion.py: add dropSecondarysWithDifferentNumberOfBursts() to discard those acquisitions during the common region calculation
+ mergeBursts.py: skip secondarys with inconsistent num of bursts by raise exception and exit
+ s1a_isce_utils.adjustValidSampleLine_V2(): remove a redundant line
Co-authored-by: Zhang Yunjun <yunjunz@users.noreply.github.com>
* stackSentl.createParser(): align break line
+ align linebreak of help msg
+ use choices=[] for auto argument checking
+ use (default: %(default)s) to show defult value
* stackSent: bugfix for new paris if ref date is close to recent
This commit fixs the missing pair between the reference date and the new acquisitions, if the reference date is the most recent "num_conn" acquisition.
* Stack: check existing orbit with glob instead of os.path.exist(dir)
* topsStack: add --num-proc for topo step
stackSentinel: add --num-proc to pass the number of parallel processes to topo.py, so that mp.Pool() can be independent of OMP_NUM_THREADS
Co-authored-by: Zhang Yunjun <yunjunz@users.noreply.github.com>
topsStack/FilterAndCoherence.py:
+ add .full suffix to the complex coherence filename only if the multilook number is 1
+ for multilook number as 1, do not run looks sub-module
topsStack/Stack.filter_coherence(): add .full suffix only when azLooks * rgLooks == 1
topsStack/mergeBursts.py: add python3 at the top of script
Otherwise, if 'stack' folder exists but is empty, the script will return ERROR as below:
```
/net/kraken/nobak/zyunjun/TonopahSenAT64/stack already exists.
Replacing master with existing stack.
updating the valid overlap region of:
/net/kraken/nobak/zyunjun/TonopahSenAT64/stack
******************
swath: 1
Traceback (most recent call last):
File "/home/zyunjun/tools/isce2/contrib/stack/topsStack/extractCommonValidRegion.py", line 109, in <module>
main()
File "/home/zyunjun/tools/isce2/contrib/stack/topsStack/extractCommonValidRegion.py", line 95, in main
topMaster = ut.loadProduct(os.path.join(inps.master , 'IW{0}.xml'.format(swath)))
File "/home/zyunjun/tools/isce2/contrib/stack/topsStack/s1a_isce_utils.py", line 26, in loadProduct
obj = pm.loadProduct(xmlname)
File "/net/kraken/home1/geomod/apps/rhel7/isce2-github/isce/components/iscesys/Component/ProductManager.py", line 25, in loadProduct
self.load(filename)
File "/net/kraken/home1/geomod/apps/rhel7/isce2-github/isce/components/iscesys/Component/Configurable.py", line 1407, in load
tmpProp, tmpFact, tmpMisc = FP.parse(filename)
File "/net/kraken/home1/geomod/apps/rhel7/isce2-github/isce/components/iscesys/Parsers/XmlParser.py", line 41, in parse
root = ET.parse(filename)
File "/net/kraken/home1/geomod/apps/anaconda3/lib/python3.7/xml/etree/ElementTree.py", line 1197, in parse
tree.parse(source, parser)
File "/net/kraken/home1/geomod/apps/anaconda3/lib/python3.7/xml/etree/ElementTree.py", line 587, in parse
source = open(source, "rb")
FileNotFoundError: [Errno 2] No such file or directory: '/net/kraken/nobak/zyunjun/TonopahSenAT64/stack/IW1.xml'
```
contrib/PyCuAmpcor/cuDenseOffsets.py:
+ expose --raw-over-samp-factor option to change the raw data oversampling factor with default of 2
+ expose --corr-win-size option, which by default, is calculated automatically based on the search window size and raw oversampling factor
+ change the namespace key for the oversampling factor of correlation surface from 'oversample' to 'corr_oversample' to avoid ambiguity, the cmd option name is still the same, thus no different in the user side.
+ use vrt file for master / slave slc data loading folllowing https://github.com/isce-framework/isce2/pull/78
+ re-organize createParse() for readability
+ add example to argparse help
stripmapStack/MaskAndFilter.py:
+ fix a bug introduced in #https://github.com/isce-framework/isce2/pull/112
+ add example usage to help message
+ mask pixels with SNR == 0, for plotting only without touching data files
+ show input parameter in the figure title
+ show percentage after SNR thresholding
+ add interpolation for matplotlib while plotting
topsStack/grossOffsets: move obsolete basemap import from the top to the related commented code block
Bryan Marfito
Ryan Burns
Russell Grew
Russell Grew
Sara Mirzaee
Sara Mirzaee
Ryan Burns
Lijun Zhu
Ryan Burns
ranneylxr
Minyan Zhong
Zhang Yunjun
Zhang Yunjun
Gerald Manipon
Heresh Fattahi
Paul A Rosen
Cheryl
shitong01