4d949a4300
Fix cmake files for GPUgeo2rdr
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Co-authored-by: Lijun Zhu <ljzhu@gps.caltech.edu>
2021-02-03 09:10:00 -08:00
2b5302c7d1
Add cmake files for GPUresampslc & GPUtopozero
2021-02-02 15:52:47 -08:00
0d5b94efad
Fix old-style gdal import
2021-01-13 15:16:51 -08:00
aa4d6abf99
add some includes for c header files ( #221 )
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* add some includes for c header files
* Trim whitespace
Co-authored-by: Ryan Burns <rtburns-jpl@users.noreply.github.com>
2021-01-13 15:13:59 -08:00
ad1815ef9c
Modernize gdal imports
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GDAL has dropped support for the older toplevel `import gdal`
in version 3.2, now requiring `from osgeo import gdal`.
2021-01-06 13:24:26 -08:00
5a8bf7633e
Merge remote-tracking branch 'upstream/main' into main
2020-11-23 21:23:58 -08:00
e51f25aa80
Update SConscript
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for resolving conflicts with recent commit
2020-11-23 21:08:17 -08:00
6a43886a72
remove comments about update from codes
2020-11-23 20:34:57 -08:00
b9894e40e7
Update ALOS.py
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remove update info from code.
2020-11-23 20:19:47 -08:00
59b2738c8c
Merge branch 'main' of https://github.com/CunrenLiang/isce2 into main
2020-11-23 20:13:41 -08:00
54626df56a
Update runIonSubband.py
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use if false instead of commenting out codes
2020-11-23 20:13:33 -08:00
fd28d2e126
Update runIonFilt.py
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delete functions not used
2020-11-22 20:44:52 -08:00
2637bb6a9e
Update runIonCorrect.py
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remove author info
2020-11-22 20:36:18 -08:00
74319b24d5
Add missing Inertial.py to Orbit module
2020-11-17 16:18:49 -08:00
f65f26e3cc
Move global vars from .h to separate TU
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These global variables were instantiated in the image_sio.h header
and included into multiple translation units, violating ODR.
They are now marked as 'extern' and declared in a separate TU.
2020-11-17 16:18:42 -08:00
e751732c0f
Privatize sardata structs
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These duplicated names spanning translation units violate ODR.
They are only used within their corresponding .c files and thus
can be given static linkage.
2020-11-17 02:58:04 -08:00
ab5a867d4b
Update runResamp.py
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Corrected some spelling errors.
2020-11-07 21:27:46 -08:00
ccaad6f47d
Update runCrossmul.py
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Corrected some spelling errors.
2020-11-07 21:27:28 -08:00
4de4c6314e
Update runCoregSd.py
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Corrected some spelling errors.
2020-11-07 21:27:12 -08:00
5c806c42ce
fix for AzimuthNoiseVectors with a lineCount of 1.
2020-11-07 21:26:36 -08:00
b341c669b0
Add files via upload
2020-11-07 16:06:02 -08:00
6b0a0ac4d4
add new files to cmakelists
2020-11-07 16:06:02 -08:00
a7b0287a0c
option for discarding burst properties in TOPS ionosphere estimation
2020-11-07 16:06:02 -08:00
9837bf381c
handling PRF change for ALOS-1 raw data
2020-11-07 16:06:02 -08:00
e9bd7edeb3
new alosStack application
2020-11-07 16:06:02 -08:00
3aa234c515
fix TerraSAR-X parameter bugs
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fixed bugs in getting range bandwidth, chirp slope, pulse duration and range sampling frequency
2020-11-07 16:06:02 -08:00
0fac7ff930
minor bug fix
2020-11-07 16:06:02 -08:00
0eda6428a9
updated filtering of ALOS-2 ionospheric phase
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1. updated filtering of ionospheric phase
2. updated mosaicking of subswath subband interferograms.
2020-11-07 16:06:02 -08:00
55b9d2c037
topsStack: ignore coreg_secondary images with inconsistent num of bursts ( #195 )
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* ImageLib: fix str syntax
* stackSentl: rename slc workflow merge for consistency
rename the mergeSLC step in "slc" workflow, to be consistent with the other workflows.
* topsStack: check inconsistent num of bursts in secondary images
+ extractCommonValidRegion.py: add dropSecondarysWithDifferentNumberOfBursts() to discard those acquisitions during the common region calculation
+ mergeBursts.py: skip secondarys with inconsistent num of bursts by raise exception and exit
+ s1a_isce_utils.adjustValidSampleLine_V2(): remove a redundant line
Co-authored-by: Zhang Yunjun <yunjunz@users.noreply.github.com>
2020-10-24 09:31:48 -07:00
3fb325a51e
don't assume sensor.extractImage supports a removeNoise arg
2020-10-19 09:47:24 -07:00
c84509e2d1
implement noise correction parameter for rtcApp.
2020-10-19 09:47:24 -07:00
b1bbf0f10f
implementation of thermal noise removal
2020-10-19 09:47:24 -07:00
ecf865af0b
CMake: Fix missing modules required for UAVSAR stripmap stack ( #180 )
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* Add missing py2to3 script
* Add missing cosar extension
* Add missing rdf parser
* Add simamplitude module
Co-authored-by: Ryan Burns <rtburns-jpl@users.noreply.github.com>
2020-10-04 11:11:55 -07:00
69418047ff
Fix for python3.8 multiprocessing
2020-10-04 11:10:24 -07:00
337dc9c158
Fix python extension linking ( #168 )
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* Silence annoying FindFFTW warnings
* Fix linker errors at import-time
Python extensions are weakly linked, so linker errors can only be
caught at runtime. This commit fixes any such broken extensions,
and adds automated import testing to ctests to prevent future
regressions.
It also adds a helper function `isce2_add_staticlib` which creates a
position-independent static library suitable for usage in multiple
python extensions. This matches the SCons build scripts more closely
and allows for future extensions to be declared in a more terse and
hygienic fashion.
* Update utilLib scripts
* Update combinedLib scripts
* Update offoutliers lib scripts
* Add asa_im_decode cdll
* Update alos lib scripts
* Show ctest output upon failure
* Update DataAccessor scripts
* Remove TARGET_FILE_BASE_NAME
* Remove incomplete stdproc modules (require stanford code)
Co-authored-by: Ryan Burns <rtburns-jpl@users.noreply.github.com>
2020-09-14 10:57:10 -07:00
278902fd1b
make sure the orbit file glob also finds files starting with S1B ( #190 )
2020-09-10 12:34:17 -07:00
1557a05b7b
Update AkimaLib.cpp ( #186 )
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add using namespace bug
2020-08-26 00:00:53 -07:00
b13d06aa3b
Merge pull request #166 from asolarte/main
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Add SAOCOM sensor
2020-07-29 15:55:37 -07:00
9983be8fe1
Cambios sugeridos por piyushrpt. Archivos modificados:
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modificado: components/isceobj/Sensor/SAOCOM_SLC.py
modificado: examples/input_files/reference_SAOCOM.xml
2020-07-27 13:56:07 -03:00
5ea7981bfd
Cambio en comentario Doppler SAOCOM_SLC.py
2020-07-27 12:01:51 -03:00
02f6af6910
Cambios en la lectura del polinomio para el cálculo del doppler
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modificado: components/isceobj/Sensor/SAOCOM_SLC.py
2020-07-23 20:42:14 -03:00
8c2429b3a5
Incorporación de script para ingesta de datos SAOCOM. Se modifican los siguientes archivos:
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modificado: README.md
modificado: components/isceobj/InsarProc/Factories.py
modificado: components/isceobj/IsceProc/runPreprocessor.py
modificado: components/isceobj/Sensor/CMakeLists.txt
nuevo archivo: components/isceobj/Sensor/SAOCOM_SLC.py
modificado: components/isceobj/Sensor/SConscript
modificado: components/isceobj/Sensor/__init__.py
modificado: components/isceobj/StripmapProc/Factories.py
modificado: components/isceobj/Util/estimateoffsets/EstimateOffsets.py
modificado: components/stdproc/stdproc/__init__.py
nuevo archivo: examples/input_files/reference_SAOCOM.xml
2020-07-21 21:47:00 -03:00
9b3e531ac5
Adding openmp to missing modules
2020-07-18 23:54:07 -07:00
2cc8178010
Use openmp for resamp_slc
2020-07-18 23:54:07 -07:00
f09213eb33
various updates from ARIA-related projects ( #149 )
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* add Dockerfile and SConfigISCE to build cuda-enabled modules
* add Dockerfile and SConfigISCE to build cuda-enabled modules
* set correct name
* update for centos7 and cuda-dev image
* restore
* disable GPUampcor
* update
* save
* sync up Dockerfile updates
* fix base image
* change docker image names
* create gpu vs. cpu specific tags
* update with nodata WBD Stitcher
* fix segmentation fault when running sciflo workflows
- remove dependencies that downgrade the `geos` conda package
* sync fix for segmentation fault to cuda builds
* ping ffi to version 1.12.2
Latest version of ffi, 1.13.0, breaks installation of fpm:
```
$ sudo gem install --no-ri --no-rdoc fpm
Fetching: cabin-0.9.0.gem (100%)
Successfully installed cabin-0.9.0
Fetching: backports-3.17.2.gem (100%)
Successfully installed backports-3.17.2
Fetching: arr-pm-0.0.10.gem (100%)
Successfully installed arr-pm-0.0.10
Fetching: clamp-1.0.1.gem (100%)
Successfully installed clamp-1.0.1
Fetching: ffi-1.13.0.gem (100%)
ERROR: Error installing fpm:
ffi requires Ruby version >= 2.3.
```
TODO: remove pin when ffi's backwards compatiblity is restored.
* comment out unused import
* add build circleci job to PR tests
* pin ffi in cuda build
* revert logging hackery
* fix "target_include_directories called with non-compilable target type" errors
* Keep source directory for topsStack
Co-authored-by: dustinlo <dustin.k.lo@jpl.nasa.gov>
Co-authored-by: shitong01 <stchin@ntu.edu.sg>
Co-authored-by: Ryan Burns <47790121+rtburns-jpl@users.noreply.github.com>
2020-07-16 16:08:57 -07:00
eb3eff61a6
Merge branch 'master' into BLM
2020-07-02 15:03:10 -07:00
e03042f4e5
diversity: replaced oppressive language with neutral definitions of the images that comprise an interferogram through the entire repository
2020-07-02 12:40:49 -07:00
14db470624
Use rpaths for linked libraries
2020-06-15 22:28:08 -07:00
a66dcfdb1b
Merge branch 'master' into cmake
2020-06-12 18:36:55 -07:00
53cceb221b
Update GPUampcor prereqs, but disable it for now
2020-06-12 17:47:06 -07:00
5bc4cd6466
fix bug in baseline computation
2020-06-06 00:12:54 -07:00
2b8fdb3acb
fix bug in baseline computation
2020-06-06 00:12:26 -07:00
c209df26ad
Set up proper fortran module directories
2020-06-04 11:42:37 -07:00
87cffaaadd
Baseline bug fix
2020-06-03 17:24:09 -07:00
ab5c20e629
Add envisat module
2020-05-22 15:49:10 -07:00
149b4aa29a
Add GPUampcor support with proper version check
2020-05-22 15:49:10 -07:00
1afdeed3c2
minor updates
2020-05-13 16:40:52 -07:00
84d3978640
minor updates
2020-05-13 16:39:41 -07:00
708593b322
fixed a bug in radar dem matching
2020-05-13 09:54:54 -07:00
f0651a311c
fixed a bug in radar dem matching
2020-05-12 22:35:28 -07:00
aee2495367
improve ALOS-2 ionospheric correciton and geocode
2020-05-11 18:06:18 -07:00
28bb81ed03
improve ALOS-2 ionospheric correciton and geocode
2020-05-11 18:05:30 -07:00
e68db01bf9
Merge pull request #89 from rtburns-jpl/cmake
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Add CMake build system
2020-05-08 12:42:01 -07:00
fb7ad09211
pull request in response to rtcApp.py is incomplete #120 ( #128 )
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* Update README.md
* Update runTopo.py
* Update rtcApp.py
* Update runNormalize.py
* Update SConscript
2020-05-06 15:04:58 -07:00
877ba1d05c
Remove unused lib
2020-05-02 16:41:50 -07:00
4863c238e8
Merge branch 'master' into cmake
2020-05-02 16:40:26 -07:00
fd963d3d21
Remove unused formslc includes
2020-05-02 16:30:10 -07:00
d8c772ea29
Disable failing tests
2020-05-02 13:27:12 -07:00
c08f0b55ea
Enable -fPIC for StdOEL common lib
2020-05-02 12:45:23 -07:00
7cf564582a
Merge branch 'master' into cmake
2020-05-02 12:32:20 -07:00
62726a5714
update ALOS-2 ionospheric correction
2020-05-02 12:11:54 -07:00
c844d49b48
remove system calls
2020-05-02 12:11:54 -07:00
d22bf1048f
enhanced merging for ALOS-2 ionospheric correction
2020-04-26 19:18:33 -07:00
81b54197e6
Merge branch 'master' into cmake
2020-04-13 14:34:14 -07:00
435e802f04
Merge pull request #114 from CunrenLiang/master
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add back from scipy.interpolate import interp1d
2020-04-13 13:07:01 -07:00
23f2ffaa1e
Use exist_ok argument to makedirs when appropriate ( #112 )
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@falkamelung noted a race condition in #106 due to non-atomic directory
checking followed by os.makedirs. This pattern exists in many places
in the codebase so I went ahead and replaced the rest of them.
The new exist_ok usage should be terser and more idiomatic.
2020-04-13 12:40:32 -07:00
ebe27ec44c
remove 'from scipy.interpolate import interp1d'
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remove the following from routines where it is not needed:
> from scipy import interpolate
> from scipy.interpolate import interp1d
2020-04-13 12:34:51 -07:00
c2a4a4a08e
add back from scipy.interpolate import interp1d
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add back the following imports:
1709a1710,1711
> from scipy import interpolate
> from scipy.interpolate import interp1d
2119a2122,2123
> from scipy import interpolate
> from scipy.interpolate import interp1d
2020-04-13 12:11:04 -07:00
5977d7b0dd
disable GPUampcor (not used) to allow CUDA >=10.0
2020-04-09 21:01:00 -07:00
0855bf2640
DenseOffsets with PyCuAmpcor: use '.slc.vrt' instead of '.slc' as inputs
2020-04-09 21:01:00 -07:00
34b1644956
Merge commit 'c92759a' into cmake
2020-04-08 12:03:59 -07:00
a4068b0f92
Merge commit 'ed30cba' into cmake
2020-04-08 12:01:11 -07:00
85519c498d
Merge commit 'f95a912' into cmake
2020-04-08 11:56:56 -07:00
4057a645a2
Merge commit '64768d4' into cmake
2020-04-08 11:05:14 -07:00
ed30cbac42
Cleaning up scansar modules
2020-03-31 11:33:11 -07:00
50816f88ae
Fix tracknumber for S1B
2020-03-31 11:33:11 -07:00
f95a912462
ALOS-2 multi-mode InSAR and ionospheric correction processors ( #107 )
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* Add files via upload
* updated tutorials and example input files
* add permissions
* add executable permission
* add executable permission to ALOS-2 applications
2020-03-28 19:19:21 -07:00
64768d4f36
Error messages ( #105 )
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* move `val` definition to avoid undefined
Currently, with only one swath, or not enough points,
val doesnt get defined, so this error gets thrown:
File ".../isce/components/isceobj/TopsProc/runESD.py", line 115, in runESD
if val.size == 0 :
UnboundLocalError: local variable 'val' referenced before assignment
the `np.array` is added so that the `val.size` check makes sense,
as opposed to doing `.size` on a list
* fix string formats in error messages
2020-03-27 21:59:13 -07:00
ea24d2320b
iscesys/DictUtils: made a copy of the configuration dict before iterating over it
2020-03-18 11:26:00 -07:00
d6e22a762f
Merge pull request #84 from rtburns-jpl/argcount
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Bugfixes for gcc/gfortran 9
2020-03-13 22:27:19 -07:00
655c46cc4a
Remove overwrite assignment when redundant bursts encountered across scenes.
2020-03-13 10:46:49 +08:00
9bee1a326b
Fix complex cast for gcc9
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Fixes #57
2020-03-10 09:00:46 -07:00
de0ea75272
Update dependencies
2020-02-27 08:51:27 -08:00
9f9f7be0d7
Inserted opencv, astropy ans scipy imports within functions
2020-02-13 17:27:07 -08:00
7c7e43c98c
bug fixes
2020-02-10 17:53:38 -08:00
3f01fd2f07
Modified algorithm for ionospheric phase estimation (polar regions)
2020-02-10 17:07:09 -08:00
d7444e83ca
Modified Ionospheric phase correction. It fixs previous version bugs and adds ionospheric phase correction facilities for grounded ice areas
2020-02-10 15:11:45 -08:00
66df719e71
Add isceobj.Sensor.ScanSAR
2020-02-03 17:51:39 -08:00
5d6a731753
Remove internal usage of ISCE_HOME env variable
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ISCE_HOME was only used to get the location of the default logging config.
Lots of scripts were using boilerplate to set up this config, so I added
an `isce.logging` helper module which is the same as builtin python logging
but already has the configuration defaults set up for isce.
ISCE_HOME setup is retained in the toplevel `__init__.py`
but can now be removed without affecting functionality.
2020-02-03 14:01:57 -08:00
6a5ae46e4e
Fix rpath by installing shared libs to system path
2020-02-03 11:58:38 -08:00
Ryan Burns
Lijun Zhu
CunrenLiang
CunrenLiang
Bryan Marfito
Vincent Schut
Zhang Yunjun
Ryan Burns
piyushrpt
JYC
Heresh Fattahi
asolarte
Gerald Manipon
Paul A Rosen
sssangha
Simon Kraatz
Lijun Zhu
Scott Staniewicz
Michael Aïvázis
shitong01
vbrancat