* added option to pass segment number through unpackFrame_UAVSAR
* changed type of segment number
* changed segment type in prepareUAVSAR_coregstack
* Revert "changed type of segment number"
This reverts commit a18c6452d4b5c95ce869dab2ee1e3bcf6ff2b1d9.
* Revert "changed segment type in prepareUAVSAR_coregstack"
This reverts commit 6cf3ebadb3a6e119c6084c8e03b8cc68d7eccc3f.
* changed type of segment number in unpackFrame_UAVSAR
* Added code to stripmapStack/topo.py to explicitly create the `geom_reference/hgt.rdr.vrt` file to work with newer GDAL
* ImageLib: fix str syntax
* stackSentl: rename slc workflow merge for consistency
rename the mergeSLC step in "slc" workflow, to be consistent with the other workflows.
* topsStack: check inconsistent num of bursts in secondary images
+ extractCommonValidRegion.py: add dropSecondarysWithDifferentNumberOfBursts() to discard those acquisitions during the common region calculation
+ mergeBursts.py: skip secondarys with inconsistent num of bursts by raise exception and exit
+ s1a_isce_utils.adjustValidSampleLine_V2(): remove a redundant line
Co-authored-by: Zhang Yunjun <yunjunz@users.noreply.github.com>
* stackSentl.createParser(): align break line
+ align linebreak of help msg
+ use choices=[] for auto argument checking
+ use (default: %(default)s) to show defult value
* stackSent: bugfix for new paris if ref date is close to recent
This commit fixs the missing pair between the reference date and the new acquisitions, if the reference date is the most recent "num_conn" acquisition.
* Stack: check existing orbit with glob instead of os.path.exist(dir)
* topsStack: add --num-proc for topo step
stackSentinel: add --num-proc to pass the number of parallel processes to topo.py, so that mp.Pool() can be independent of OMP_NUM_THREADS
Co-authored-by: Zhang Yunjun <yunjunz@users.noreply.github.com>
* added option to pass segment number through unpackFrame_UAVSAR
* changed type of segment number
* changed segment type in prepareUAVSAR_coregstack
* Revert "changed type of segment number"
This reverts commit a18c6452d4b5c95ce869dab2ee1e3bcf6ff2b1d9.
* Revert "changed segment type in prepareUAVSAR_coregstack"
This reverts commit 6cf3ebadb3a6e119c6084c8e03b8cc68d7eccc3f.
* changed type of segment number in unpackFrame_UAVSAR
* Silence annoying FindFFTW warnings
* Fix linker errors at import-time
Python extensions are weakly linked, so linker errors can only be
caught at runtime. This commit fixes any such broken extensions,
and adds automated import testing to ctests to prevent future
regressions.
It also adds a helper function `isce2_add_staticlib` which creates a
position-independent static library suitable for usage in multiple
python extensions. This matches the SCons build scripts more closely
and allows for future extensions to be declared in a more terse and
hygienic fashion.
* Update utilLib scripts
* Update combinedLib scripts
* Update offoutliers lib scripts
* Add asa_im_decode cdll
* Update alos lib scripts
* Show ctest output upon failure
* Update DataAccessor scripts
* Remove TARGET_FILE_BASE_NAME
* Remove incomplete stdproc modules (require stanford code)
Co-authored-by: Ryan Burns <rtburns-jpl@users.noreply.github.com>
+ update os.system() call of gdal2isce_xml.py with the python function call, in stripmapStack/topo.py and applications/downsampleDEM.py
+ break the long lines in downsampleDEM.py for easy reading
topsStack/FilterAndCoherence.py:
+ add .full suffix to the complex coherence filename only if the multilook number is 1
+ for multilook number as 1, do not run looks sub-module
topsStack/Stack.filter_coherence(): add .full suffix only when azLooks * rgLooks == 1
topsStack/mergeBursts.py: add python3 at the top of script
Otherwise, if 'stack' folder exists but is empty, the script will return ERROR as below:
```
/net/kraken/nobak/zyunjun/TonopahSenAT64/stack already exists.
Replacing master with existing stack.
updating the valid overlap region of:
/net/kraken/nobak/zyunjun/TonopahSenAT64/stack
******************
swath: 1
Traceback (most recent call last):
File "/home/zyunjun/tools/isce2/contrib/stack/topsStack/extractCommonValidRegion.py", line 109, in <module>
main()
File "/home/zyunjun/tools/isce2/contrib/stack/topsStack/extractCommonValidRegion.py", line 95, in main
topMaster = ut.loadProduct(os.path.join(inps.master , 'IW{0}.xml'.format(swath)))
File "/home/zyunjun/tools/isce2/contrib/stack/topsStack/s1a_isce_utils.py", line 26, in loadProduct
obj = pm.loadProduct(xmlname)
File "/net/kraken/home1/geomod/apps/rhel7/isce2-github/isce/components/iscesys/Component/ProductManager.py", line 25, in loadProduct
self.load(filename)
File "/net/kraken/home1/geomod/apps/rhel7/isce2-github/isce/components/iscesys/Component/Configurable.py", line 1407, in load
tmpProp, tmpFact, tmpMisc = FP.parse(filename)
File "/net/kraken/home1/geomod/apps/rhel7/isce2-github/isce/components/iscesys/Parsers/XmlParser.py", line 41, in parse
root = ET.parse(filename)
File "/net/kraken/home1/geomod/apps/anaconda3/lib/python3.7/xml/etree/ElementTree.py", line 1197, in parse
tree.parse(source, parser)
File "/net/kraken/home1/geomod/apps/anaconda3/lib/python3.7/xml/etree/ElementTree.py", line 587, in parse
source = open(source, "rb")
FileNotFoundError: [Errno 2] No such file or directory: '/net/kraken/nobak/zyunjun/TonopahSenAT64/stack/IW1.xml'
```
contrib/PyCuAmpcor/cuDenseOffsets.py:
+ expose --raw-over-samp-factor option to change the raw data oversampling factor with default of 2
+ expose --corr-win-size option, which by default, is calculated automatically based on the search window size and raw oversampling factor
+ change the namespace key for the oversampling factor of correlation surface from 'oversample' to 'corr_oversample' to avoid ambiguity, the cmd option name is still the same, thus no different in the user side.
+ use vrt file for master / slave slc data loading folllowing https://github.com/isce-framework/isce2/pull/78
+ re-organize createParse() for readability
+ add example to argparse help
stripmapStack/MaskAndFilter.py:
+ fix a bug introduced in #https://github.com/isce-framework/isce2/pull/112
+ add example usage to help message
+ mask pixels with SNR == 0, for plotting only without touching data files
+ show input parameter in the figure title
+ show percentage after SNR thresholding
+ add interpolation for matplotlib while plotting
topsStack/grossOffsets: move obsolete basemap import from the top to the related commented code block
related with https://github.com/isce-framework/isce2/pull/97
+ move cpx cohe calculation code from main() to estCpxCoherence()
+ move computeCoherence import from the top to the inside of estCpxCoherence(), to avoid import error/warning sometimes.
+ fix typo in the default value of --cc option from 'fine.cori.full' to 'fine.cor.full'
+ FilterAndCoherence: skip filtering if input filter strength <= 0 and use original phase for coherence estimation
+ Stack: do not add filt_ prefix to output file if input filter strength <= 0
CunrenLiang
CunrenLiang
Eric Fielding
Zhang Yunjun
piyushrpt
Ryan Burns
Zhang Yunjun
Ryan Burns
Gerald Manipon
Heresh Fattahi
Paul A Rosen
Cheryl
shitong01
sssangha
Minyan Zhong