ISCE_INSAR/contrib/stack/topsStack/generateIgram.py

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2019-01-16 19:40:08 +00:00
#!/usr/bin/env python3
# Author: Piyush Agram
# Heresh Fattahi: Adopted for stack
import isce
import isceobj
import numpy as np
from isceobj.Util.Poly2D import Poly2D
import argparse
import os
import copy
from isceobj.Sensor.TOPS import createTOPSSwathSLCProduct
from mroipac.correlation.correlation import Correlation
import s1a_isce_utils as ut
import gdal
def createParser():
parser = argparse.ArgumentParser( description='Use polynomial offsets and create burst by burst interferograms')
parser.add_argument('-m', '--master', dest='master', type=str, required=True,
help='Directory with master acquisition')
parser.add_argument('-s', '--slave', dest='slave', type=str, required=True,
help='Directory with slave acquisition')
parser.add_argument('-f', '--flatten', dest='flatten', action='store_true', default=False,
help='Flatten the interferograms with offsets if needed')
parser.add_argument('-i', '--interferogram', dest='interferogram', type=str, default='interferograms',
help='Path for the interferogram')
parser.add_argument('-p', '--interferogram_prefix', dest='intprefix', type=str, default='int',
help='Prefix for the interferogram')
parser.add_argument('-v', '--overlap', dest='overlap', action='store_true', default=False,
help='Flatten the interferograms with offsets if needed')
return parser
def cmdLineParse(iargs = None):
parser = createParser()
return parser.parse_args(args=iargs)
def multiply(masname, slvname, outname, rngname1, rngname2, fact, masterFrame,
flatten=False):
print('multiply')
masImg = isceobj.createSlcImage()
masImg.load( masname + '.xml')
width = masImg.getWidth()
length = masImg.getLength()
ds = gdal.Open(masname + '.vrt', gdal.GA_ReadOnly)
master = ds.GetRasterBand(1).ReadAsArray()
ds = None
ds = gdal.Open(slvname + '.vrt', gdal.GA_ReadOnly)
slave = ds.GetRasterBand(1).ReadAsArray()
ds = None
print('read')
#master = np.memmap(masname, dtype=np.complex64, mode='r', shape=(length,width))
#slave = np.memmap(slvname, dtype=np.complex64, mode='r', shape=(length, width))
if os.path.exists(rngname1):
rng1 = np.memmap(rngname1, dtype=np.float32, mode='r', shape=(length,width))
else:
print('No range offsets provided')
rng1 = np.zeros((length,width))
if os.path.exists(rngname2):
rng2 = np.memmap(rngname2, dtype=np.float32, mode='r', shape=(length,width))
else:
print('No range offsets provided')
rng2 = np.zeros((length,width))
rng12 = rng2 - rng1
cJ = np.complex64(-1j)
#Zero out anytging outside the valid region:
ifg = np.memmap(outname, dtype=np.complex64, mode='w+', shape=(length,width))
firstS = masterFrame.firstValidSample
lastS = masterFrame.firstValidSample + masterFrame.numValidSamples -1
firstL = masterFrame.firstValidLine
lastL = masterFrame.firstValidLine + masterFrame.numValidLines - 1
for kk in range(firstL,lastL + 1):
ifg[kk,firstS:lastS + 1] = master[kk,firstS:lastS + 1] * np.conj(slave[kk,firstS:lastS + 1])
if flatten:
phs = np.exp(cJ*fact*rng12[kk,firstS:lastS + 1])
ifg[kk,firstS:lastS + 1] *= phs
####
master=None
slave=None
ifg = None
objInt = isceobj.createIntImage()
objInt.setFilename(outname)
objInt.setWidth(width)
objInt.setLength(length)
objInt.setAccessMode('READ')
#objInt.createImage()
#objInt.finalizeImage()
objInt.renderHdr()
objInt.renderVRT()
return objInt
def main(iargs=None):
'''Create overlap interferograms.
'''
inps=cmdLineParse(iargs)
if inps.overlap:
masterSwathList = ut.getSwathList(os.path.join(inps.master, 'overlap'))
slaveSwathList = ut.getSwathList(os.path.join(inps.slave, 'overlap'))
else:
masterSwathList = ut.getSwathList(inps.master)
slaveSwathList = ut.getSwathList(inps.slave)
swathList = list(sorted(set(masterSwathList+slaveSwathList)))
for swath in swathList:
IWstr = 'IW{0}'.format(swath)
if inps.overlap:
ifgdir = os.path.join(inps.interferogram, 'overlap', 'IW{0}'.format(swath))
else:
ifgdir = os.path.join(inps.interferogram, 'IW{0}'.format(swath))
if not os.path.exists(ifgdir):
os.makedirs(ifgdir)
####Load relevant products
if inps.overlap:
topMaster = ut.loadProduct(os.path.join(inps.master , 'overlap','IW{0}_top.xml'.format(swath)))
botMaster = ut.loadProduct(os.path.join(inps.master ,'overlap', 'IW{0}_bottom.xml'.format(swath)))
topCoreg = ut.loadProduct(os.path.join(inps.slave, 'overlap', 'IW{0}_top.xml'.format(swath)))
botCoreg = ut.loadProduct(os.path.join(inps.slave, 'overlap', 'IW{0}_bottom.xml'.format(swath)))
else:
topMaster = ut.loadProduct(os.path.join(inps.master , 'IW{0}.xml'.format(swath)))
topCoreg = ut.loadProduct(os.path.join(inps.slave , 'IW{0}.xml'.format(swath)))
if inps.overlap:
coregdir = os.path.join(inps.slave, 'overlap', 'IW{0}'.format(swath))
else:
coregdir = os.path.join(inps.slave,'IW{0}'.format(swath))
topIfg = ut.coregSwathSLCProduct()
topIfg.configure()
if inps.overlap:
botIfg = ut.coregSwathSLCProduct()
botIfg.configure()
minMaster = topMaster.bursts[0].burstNumber
maxMaster = topMaster.bursts[-1].burstNumber
minSlave = topCoreg.bursts[0].burstNumber
maxSlave = topCoreg.bursts[-1].burstNumber
minBurst = max(minSlave, minMaster)
maxBurst = min(maxSlave, maxMaster)
print ('minSlave,maxSlave',minSlave, maxSlave)
print ('minMaster,maxMaster',minMaster, maxMaster)
print ('minBurst, maxBurst: ', minBurst, maxBurst)
for ii in range(minBurst, maxBurst + 1):
####Process the top bursts
master = topMaster.bursts[ii-minMaster]
slave = topCoreg.bursts[ii-minSlave]
print('matching burst numbers: ',master.burstNumber, slave.burstNumber)
mastername = master.image.filename
slavename = slave.image.filename
if inps.overlap:
rdict = { 'rangeOff1' : os.path.join(inps.master, 'overlap', IWstr, 'range_top_%02d_%02d.off'%(ii,ii+1)),
'rangeOff2' : os.path.join(inps.slave, 'overlap', IWstr, 'range_top_%02d_%02d.off'%(ii,ii+1)),
'azimuthOff': os.path.join(inps.slave, 'overlap', IWstr, 'azimuth_top_%02d_%02d.off'%(ii,ii+1))}
intname = os.path.join(ifgdir, '%s_top_%02d_%02d.int'%(inps.intprefix,ii,ii+1))
else:
rdict = {'rangeOff1' : os.path.join(inps.master, IWstr, 'range_%02d.off'%(ii)),
'rangeOff2' : os.path.join(inps.slave, IWstr, 'range_%02d.off'%(ii)),
'azimuthOff1': os.path.join(inps.slave, IWstr, 'azimuth_%02d.off'%(ii))}
intname = os.path.join(ifgdir, '%s_%02d.int'%(inps.intprefix,ii))
ut.adjustCommonValidRegion(master,slave)
fact = 4 * np.pi * slave.rangePixelSize / slave.radarWavelength
intimage = multiply(mastername, slavename, intname,
rdict['rangeOff1'], rdict['rangeOff2'], fact, master, flatten=inps.flatten)
burst = copy.deepcopy(master)
burst.image = intimage
burst.burstNumber = ii
topIfg.bursts.append(burst)
if inps.overlap:
####Process the bottom bursts
master = botMaster.bursts[ii-minMaster]
slave = botCoreg.bursts[ii-minSlave]
mastername = master.image.filename
slavename = slave.image.filename
# rdict = {'rangeOff' : os.path.join(coregdir, 'range_bot_%02d_%02d.off'%(ii,ii+1)),
# 'azimuthOff': os.path.join(coregdir, 'azimuth_bot_%02d_%02d.off'%(ii,ii+1))}
rdict = { 'rangeOff1' : os.path.join(inps.master, 'overlap', IWstr, 'range_bot_%02d_%02d.off'%(ii,ii+1)),
'rangeOff2' : os.path.join(inps.slave, 'overlap', IWstr, 'range_bot_%02d_%02d.off'%(ii,ii+1)),
'azimuthOff': os.path.join(inps.slave, 'overlap', IWstr, 'azimuth_bot_%02d_%02d.off'%(ii,ii+1))}
print ('rdict: ', rdict)
ut.adjustCommonValidRegion(master,slave)
intname = os.path.join(ifgdir, '%s_bot_%02d_%02d.int'%(inps.intprefix,ii,ii+1))
fact = 4 * np.pi * slave.rangePixelSize / slave.radarWavelength
#intimage = multiply(mastername, slavename, intname,
# rdict['rangeOff'], fact, master, flatten=True)
intimage = multiply(mastername, slavename, intname,
rdict['rangeOff1'], rdict['rangeOff2'], fact, master, flatten=inps.flatten)
burst = copy.deepcopy(master)
burst.burstNumber = ii
burst.image = intimage
botIfg.bursts.append(burst)
topIfg.numberOfBursts = len(topIfg.bursts)
if hasattr(topCoreg, 'reference'):
topIfg.reference = topCoreg.reference
else:
topIfg.reference = topMaster.reference
print('Type: ',type(topIfg.reference))
if inps.overlap:
ut.saveProduct(topIfg, ifgdir + '_top.xml')
botIfg.numberOfBursts = len(botIfg.bursts)
botIfg.reference = botCoreg.reference
print(botIfg.reference)
ut.saveProduct(botIfg, ifgdir + '_bottom.xml')
else:
ut.saveProduct(topIfg, ifgdir + '.xml')
if __name__ == '__main__':
'''
Main driver.
'''
main()